tegument_protein_VP11_12

Euk-Vir

Human_alphaherpesvirus_2

tegument_protein_VP11_12__YP_009137198__Human_alphaherpesvirus_2__10310

Identity

65.1 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Simplexvirus› Human_alphaherpesvirus_2

TaxID: 10310

View cluster (32 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 19-60

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03387.19 best	Herpes_UL46	39.5	4.30e-10	88.1%	8.5%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3712832	2.1.1.15 ↗	beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon	0.55	49.0	3.28e-01	100.0%	75.2%

D2 medium residues 225-287_363-399

PDB

Domain cluster: rep: tegument_protein_VP11_12__YP_164489__Cercopithecine_alphaherpesvirus_2__10317__D222-289_353-383

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03387.19 best	Herpes_UL46	96.5	2.20e-27	65.0%	14.5%
PF03387.19	Herpes_UL46	51.8	7.80e-14	38.0%	8.5%

D3 medium residues 288-362

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03387.19 best	Herpes_UL46	127.0	1.20e-36	100.0%	17.2%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4gx0A01	1.10.287.70	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.70	55.0	4.94e-01	85.3%	96.1%
3ll9B00	3.40.1160.10	Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like	0.57	49.0	3.44e-01	96.0%	52.6%