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tegument_protein_VP13_14

Euk-Vir

Human_alphaherpesvirus_3

tegument_protein_VP13_14__NP_040134__Human_alphaherpesvirus_3__10335

Identity

Accession:: NP_040134 ↗
Protein ID:: tegument_protein_VP13_14
Kingdom:: euk

Quality

59.9 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Human_alphaherpesvirus_3

TaxID: 10335

Cluster

View cluster (31 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 353-403

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03362.19 best	Herpes_UL47	67.3	1.70e-18	92.2%	9.9%

D2 medium residues 404-464_489-536_676-686_746-787

PDB

Domain cluster: representative

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03362.19 best	Herpes_UL47	78.1	9.00e-22	38.9%	12.1%
PF03362.19	Herpes_UL47	64.6	1.10e-17	37.6%	13.7%
PF03362.19	Herpes_UL47	32.2	7.30e-08	29.0%	8.4%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4010416	1.1.7.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C	0.57	25.0	2.80e-01	88.3%	50.4%
166741	101.1.1.13 ↗	alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1	0.51	26.0	3.15e-01	79.6%	74.1%

D3 medium residues 465-488_537-675

PDB

Domain cluster: rep: tegument_protein_VP13_14__YP_009342356__Spheniscid_alphaherpesvirus_1__2560777__D493-649

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03362.19 best	Herpes_UL47	182.4	2.10e-53	86.5%	30.4%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3pwxA01	1.20.1330.10	Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain	0.70	48.0	4.66e-01	77.3%	62.0%
3iqcA00	1.20.120.340	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS	0.69	40.0	4.65e-01	85.3%	79.0%
2jqqA00	1.20.58.1240	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.58	45.0	4.69e-01	93.9%	87.7%
7ys6A01	1.20.1070.10	Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins	0.54	40.0	3.41e-01	100.0%	47.2%
1jadA00	1.20.1230.10	Mainly Alpha › Up-down Bundle › Phospholipase C Beta; Chain: A › Phospholipase C beta, distal C-terminal domain	0.52	38.0	3.40e-01	76.7%	90.1%
1q16C01	1.20.950.20	Mainly Alpha › Up-down Bundle › Fumarate Reductase Cytochrome B subunit › Transmembrane di-heme cytochromes, Chain C	0.52	41.0	3.81e-01	85.3%	77.1%
2hsbA00	1.20.120.330	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2	0.51	33.0	3.62e-01	100.0%	82.5%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3282142	3684.1.1.0 ↗	alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like	0.72	51.0	5.44e-01	82.8%	82.1%
3714715	603.1.1.0 ↗	alpha bundles › STAT-like › t-snare proteins › t-snare proteins	0.65	45.0	4.55e-01	71.2%	83.6%
3511717	601.15.1.2 ↗	alpha bundles › Four-helical up-and-down bundle › Proteasome activator reg(alpha) › Proteasome activator reg(alpha) › PA28_C	0.55	40.0	3.86e-01	76.1%	77.9%
3756948	601.19.1.17 ↗	alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Niban2	0.55	41.0	4.08e-01	77.3%	78.8%
5035899	601.30.1.1 ↗	alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N	0.54	39.0	3.99e-01	74.8%	84.4%
3599199	601.30.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320	0.54	38.0	3.95e-01	73.0%	86.5%
3391723	5073.1.1.11 ↗	alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_C	0.54	49.0	3.58e-01	99.4%	44.6%
5033597	601.30.1.1 ↗	alpha bundles › Four-helical up-and-down bundle › Helical bundle domain in hypothetical protein PH1320 › Helical bundle domain in hypothetical protein PH1320 › NOG1_N	0.53	38.0	3.93e-01	73.0%	85.2%
3231057	5000.3.1.2 ↗	alpha arrays › Toxins' membrane translocation domains › Bcl-2 inhibitors of programmed cell death › Bcl-2 inhibitors of programmed cell death › Bcl-2,BH4	0.50	30.0	3.01e-01	91.4%	53.1%

D4 medium residues 687-745_788-819

PDB

Domain cluster: rep: tegument_protein_VP13_14__YP_010087560__Cervid_alphaherpesvirus_3__2115790__D637-662_681-698_727-758

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03362.19 best	Herpes_UL47	80.2	2.00e-22	68.1%	13.0%