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tegument_protein_VP13_14
Euk-VirEquid_alphaherpesvirus_4
tegument_protein_VP13_14__NP_045230__Equid_alphaherpesvirus_4__10331
Identity
- Accession:
- NP_045230 ↗
- Protein ID:
- tegument_protein_VP13_14
- Kingdom:
- euk
Quality
68.1
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Equid_alphaherpesvirus_4
TaxID: 10331
Cluster
View cluster (31 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 328-390
Domain cluster:
representative
D2
medium
residues 391-449
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4q6rB01 | 6.10.140.2150 | Special › Helix non-globular › Helix Hairpins › | 0.64 | 33.0 | 3.51e-01 | 71.2% | 54.7% |
| 3g79A02 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.57 | 48.0 | 3.28e-01 | 100.0% | 78.9% |
| 3lxuX03 | 6.10.250.3080 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.55 | 38.0 | 3.75e-01 | 79.7% | 69.4% |
| 3bexA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 39.0 | 3.30e-01 | 81.4% | 57.1% |
| 3hbxA01 | 4.10.280.50 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › | 0.53 | 37.0 | 3.84e-01 | 72.9% | 85.2% |
| 1bxkA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 41.0 | 2.80e-01 | 93.2% | 46.8% |
| 1rz4A01 | 1.25.40.250 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › ARM repeat; domain 1 | 0.52 | 39.0 | 3.11e-01 | 86.4% | 40.0% |
| 6lqfA01 | 1.10.150.60 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › ARID DNA-binding domain | 0.51 | 40.0 | 3.38e-01 | 86.4% | 58.0% |
| 2ayaA00 | 3.30.300.150 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › DNA polymerase III, tau subunit, domain V | 0.51 | 35.0 | 2.85e-01 | 74.6% | 81.2% |
| 3aonA00 | 1.10.287.3240 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.50 | 41.0 | 2.97e-01 | 94.9% | 59.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3814111 | 3016.1.1.2 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_3 | 0.57 | 46.0 | 4.11e-01 | 86.4% | 75.0% |
| 4807858 | 304.48.1.11 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RNA_pol | 0.55 | 33.0 | 3.43e-01 | 89.8% | 62.3% |
D3
medium
residues 450-546
Domain cluster:
rep: tegument_protein__YP_009664633__Bubaline_alphaherpesvirus_1__202910__D370-457
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03362.19 best | Herpes_UL47 | 25.5 | 8.00e-06 | 100.0% | 20.3% |
D4
medium
residues 547-841
Domain cluster:
rep: tegument_protein_VP13_14__YP_068328__Suid_alphaherpesvirus_1__10345__D439-734
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03362.19 best | Herpes_UL47 | 97.6 | 1.10e-27 | 97.0% | 53.5% |