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tegument_protein_VP13_14
Euk-VirMeleagrid_alphaherpesvirus_1
tegument_protein_VP13_14__NP_073341__Meleagrid_alphaherpesvirus_1__37108
Identity
- Accession:
- NP_073341 ↗
- Protein ID:
- tegument_protein_VP13_14
- Kingdom:
- euk
Quality
62.6
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Mardivirus›
Meleagrid_alphaherpesvirus_1
TaxID: 37108
Cluster
View cluster (31 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 362-412_462-473_709-766
Domain cluster:
rep: tegument_protein_VP13_14__NP_066879__Gallid_alphaherpesvirus_3__35250__D383-431_722-765
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03362.19 best | Herpes_UL47 | 33.7 | 2.70e-08 | 54.5% | 13.0% |
| PF03362.19 | Herpes_UL47 | 35.7 | 6.50e-09 | 43.8% | 10.3% |
D2
medium
residues 553-681
Domain cluster:
rep: tegument_protein_VP13_14__YP_009342356__Spheniscid_alphaherpesvirus_1__2560777__D493-649
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03362.19 best | Herpes_UL47 | 70.1 | 2.40e-19 | 100.0% | 26.9% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2yfaA02 | 1.20.1440.210 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.76 | 53.0 | 5.56e-01 | 93.0% | 79.3% |
| 3dyjA02 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.69 | 53.0 | 5.06e-01 | 93.0% | 68.9% |
| 8e9gK01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 42.0 | 4.88e-01 | 82.2% | 90.1% |
| 4w8pA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.66 | 52.0 | 5.20e-01 | 96.9% | 81.5% |
| 6xz3A01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.65 | 49.0 | 5.14e-01 | 90.7% | 86.3% |
| 3tulB00 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.65 | 55.0 | 5.49e-01 | 90.7% | 97.7% |
| 1k04A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.64 | 49.0 | 5.35e-01 | 96.9% | 100.0% |
| 4ciuA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.62 | 50.0 | 4.33e-01 | 83.7% | 84.4% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.62 | 45.0 | 4.61e-01 | 75.2% | 96.8% |
| 1i4dA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.59 | 53.0 | 4.69e-01 | 99.2% | 96.8% |
| 3c5iA02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.59 | 46.0 | 3.61e-01 | 82.2% | 70.3% |
| 7cj3A01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.58 | 50.0 | 4.00e-01 | 93.8% | 63.2% |
| 1zb1A00 | 1.25.40.280 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › alix/aip1 like domains | 0.57 | 44.0 | 3.21e-01 | 82.9% | 63.5% |
| 4wjg400 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.56 | 51.0 | 4.03e-01 | 99.2% | 83.5% |
| 1cpqA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.55 | 43.0 | 4.38e-01 | 90.7% | 82.9% |
| 5jajA03 | 1.20.1320.30 | Mainly Alpha › Up-down Bundle › phosphoenolpyruvate carboxylase, domain 3 › | 0.52 | 36.0 | 3.78e-01 | 84.5% | 78.4% |
ECOD (46)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3538067 | 633.10.1.15 ↗ | alpha bundles › Bromodomain-like › IVS-encoded protein-like › IVS-encoded protein-like › Transmemb_17 | 0.78 | 53.0 | 6.29e-01 | 83.7% | 100.0% |
| 3534658 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.76 | 61.0 | 5.60e-01 | 88.4% | 66.9% |
| 4014222 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.75 | 62.0 | 5.52e-01 | 99.2% | 63.3% |
| 3497251 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.74 | 42.0 | 5.32e-01 | 96.1% | 92.5% |
| 3622987 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.73 | 59.0 | 4.92e-01 | 96.9% | 50.7% |
| 3503767 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.73 | 54.0 | 5.24e-01 | 92.2% | 70.0% |
| 2878134 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.72 | 59.0 | 5.76e-01 | 100.0% | 80.0% |
| 4019922 | 611.4.1.0 ↗ | alpha bundles › N-cbl like › PG0775 C-terminal domain-like › PG0775 C-terminal domain-like | 0.71 | 57.0 | 5.10e-01 | 83.7% | 72.0% |
| 5054469 | 192.7.1.2 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N | 0.70 | 49.0 | 5.46e-01 | 72.1% | 94.3% |
| 3213957 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.70 | 53.0 | 4.82e-01 | 79.1% | 92.4% |
| 4984355 | 3843.1.1.1 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2 | 0.68 | 48.0 | 5.40e-01 | 87.6% | 93.9% |
| 4398872 | 174.1.1.43 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 | 0.68 | 55.0 | 5.09e-01 | 97.7% | 68.1% |
| 4019030 | 5086.1.1.12 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › Uds1 | 0.68 | 45.0 | 5.08e-01 | 89.1% | 87.0% |
| 3581554 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.68 | 57.0 | 4.66e-01 | 87.6% | 85.3% |
| 4049979 | 633.21.1.23 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20 | 0.68 | 51.0 | 5.06e-01 | 98.4% | 74.1% |
| 3574188 | 601.33.1.8 ↗ | alpha bundles › Four-helical up-and-down bundle › CHAD domain › CHAD domain › Frag1 | 0.68 | 55.0 | 5.25e-01 | 96.1% | 75.2% |
| 3728087 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.67 | 46.0 | 4.89e-01 | 79.1% | 78.3% |
| 4929270 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.67 | 58.0 | 5.08e-01 | 96.1% | 63.8% |
| 3389689 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.67 | 51.0 | 4.86e-01 | 95.3% | 66.9% |
| 3756853 | 174.1.1.43 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 | 0.67 | 53.0 | 4.67e-01 | 98.4% | 57.4% |
| 3240929 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.67 | 57.0 | 4.76e-01 | 90.7% | 91.2% |
| 3475323 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.66 | 51.0 | 5.01e-01 | 89.9% | 75.6% |
| 3934932 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.66 | 53.0 | 5.22e-01 | 90.7% | 78.6% |
| 3258394 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.66 | 61.0 | 4.70e-01 | 100.0% | 68.0% |
| 3230399 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.65 | 51.0 | 4.85e-01 | 86.8% | 70.0% |
| 3934550 | 3562.1.1.1 ↗ | alpha bundles › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › Calcium release-activated calcium channel protein 1 › Orai-1 | 0.65 | 58.0 | 5.04e-01 | 95.3% | 67.9% |
| 3518474 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.65 | 49.0 | 4.91e-01 | 88.4% | 76.9% |
| 3751245 | 633.23.1.8 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › DUF4534 | 0.64 | 52.0 | 4.94e-01 | 93.8% | 74.0% |
| 3502871 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.63 | 48.0 | 4.83e-01 | 89.1% | 78.4% |
| 3930031 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.62 | 52.0 | 4.88e-01 | 89.1% | 78.7% |
| 3600080 | 3755.3.1.0 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin | 0.62 | 48.0 | 3.54e-01 | 80.6% | 74.7% |
| 5015138 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.62 | 51.0 | 4.94e-01 | 87.6% | 82.1% |
| 3686122 | 633.23.1.9 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › SUR7 | 0.62 | 57.0 | 4.65e-01 | 100.0% | 87.2% |
| 3675872 | 633.6.1.8 ↗ | alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like › ACOX_C_alpha1 | 0.61 | 51.0 | 5.22e-01 | 95.3% | 92.0% |
| 3678774 | 611.7.1.2 ↗ | alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › MCAfunc | 0.60 | 48.0 | 4.70e-01 | 83.7% | 81.4% |
| 3621149 | 4177.1.1.0 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like | 0.60 | 53.0 | 4.45e-01 | 96.9% | 84.4% |
| 3390382 | 174.1.1.29 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › DUF4728 | 0.60 | 51.0 | 4.69e-01 | 96.1% | 72.1% |
| 3628196 | 5069.1.1.7 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_B561 | 0.59 | 53.0 | 4.53e-01 | 97.7% | 65.4% |
| 4100508 | 3843.1.1.4 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › PhaG_MnhG_YufB | 0.59 | 48.0 | 5.03e-01 | 88.4% | 94.2% |
| 3552608 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.58 | 46.0 | 4.43e-01 | 89.1% | 72.7% |
| 3938965 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.57 | 49.0 | 4.03e-01 | 95.3% | 85.3% |
| 5043412 | 1025.1.1.0 ↗ | alpha bundles › Stonustoxin helical domain › Stonustoxin helical domain › Stonustoxin helical domain | 0.56 | 45.0 | 4.80e-01 | 99.2% | 97.4% |
| 3736919 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.55 | 45.0 | 3.95e-01 | 100.0% | 58.5% |
| 3627459 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.54 | 42.0 | 3.95e-01 | 80.6% | 68.4% |
| 3785458 | 109.4.1.681 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans_2 | 0.53 | 44.0 | 3.00e-01 | 89.1% | 34.3% |
| 3773055 | 174.1.1.1 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin | 0.53 | 40.0 | 3.85e-01 | 89.9% | 69.7% |