tegument_protein_VP13_14

Euk-Vir

Macropodid_alphaherpesvirus_1

tegument_protein_VP13_14__YP_009227279__Macropodid_alphaherpesvirus_1__137443

Identity

73.7 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Simplexvirus› Macropodid_alphaherpesvirus_1

TaxID: 137443

View cluster (31 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 157-173_200-236_252-286_357-413

PDB

Domain cluster: rep: tegument_protein_VP13_14__YP_443894__Papiine_alphaherpesvirus_2__340907__D162-211_229-291_353-394

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03362.19 best	Herpes_UL47	35.7	6.50e-09	68.5%	11.5%

D2 medium residues 174-199_287-356_534-605

PDB

Domain cluster: representative

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2uxwA01	1.20.140.10	Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3	0.56	33.0	3.18e-01	90.5%	49.5%
5azsC01	1.20.1600.10	Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP)	0.55	48.0	3.82e-01	96.4%	88.5%
1gqeA01	1.20.58.410	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Release factor	0.55	31.0	3.75e-01	92.9%	82.3%
2pmsC00	6.10.140.920	Special › Helix non-globular › Helix Hairpins ›	0.54	32.0	3.95e-01	92.9%	90.8%
4id0A02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.52	28.0	3.37e-01	83.9%	76.8%
1tf5A04	1.10.3060.10	Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA	0.51	40.0	3.94e-01	81.5%	83.0%
3d85C00	1.20.1250.10	Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; ›	0.51	30.0	3.32e-01	78.0%	71.4%
2yfaA02	1.20.1440.210	Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) ›	0.50	32.0	3.72e-01	96.4%	91.4%
6t4hA03	1.10.3060.10	Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA	0.50	40.0	3.97e-01	81.5%	85.5%

ECOD (8)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3288953	1075.4.1.1 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane	0.56	39.0	3.13e-01	70.2%	96.8%
3787103	1203.1.2.0 ↗	alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2	0.53	28.0	3.07e-01	91.7%	60.7%
3996900	601.25.1.0 ↗	alpha bundles › Four-helical up-and-down bundle › TrmE connector domain › TrmE connector domain	0.52	30.0	3.40e-01	98.2%	72.3%
3594664	1075.4.1.0 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold	0.52	37.0	2.84e-01	70.8%	95.4%
3608693	632.1.1.0 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain	0.52	29.0	3.51e-01	79.8%	84.8%
3737012	150.1.1.0 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin	0.51	37.0	3.99e-01	95.8%	91.9%
None	—		0.51	43.0	2.90e-01	89.9%	39.8%
3988659	1075.4.1.1 ↗	alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane	0.51	37.0	2.89e-01	72.6%	89.1%

D3 medium residues 414-533

PDB

Domain cluster: rep: tegument_protein_VP13_14__YP_443894__Papiine_alphaherpesvirus_2__340907__D395-497

D4 medium residues 641-695

PDB

Domain cluster: rep: tegument_protein_VP13_14__YP_009011034__Chimpanzee_herpesvirus_strain_105640__332937__D629-685