tegument_protein_VP13_14

Euk-Vir

Columbid_alphaherpesvirus_1

tegument_protein_VP13_14__YP_009352957__Columbid_alphaherpesvirus_1__93386

Identity

68.6 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Mardivirus› Columbid_alphaherpesvirus_1

TaxID: 93386

View cluster (31 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 242-291

PDB

Domain cluster: representative

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3304821	323.1.1.3 ↗	a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding	0.64	43.0	2.66e-01	70.0%	20.0%

D2 medium residues 292-349

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3lxuX03	6.10.250.3080	Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces ›	0.59	44.0	4.37e-01	79.3%	75.8%
6nyyE01	1.20.58.760	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Peptidase M41	0.59	51.0	3.68e-01	100.0%	53.8%
2gtaA00	1.10.287.1080	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like	0.57	47.0	3.97e-01	91.4%	81.4%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3911582	633.21.1.23 ↗	alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 › CD20	0.68	61.0	4.47e-01	100.0%	84.7%
5048111	2005.1.1.3 ↗	a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp	0.58	49.0	3.59e-01	93.1%	49.0%

D3 medium residues 350-754

PDB

Domain cluster: rep: tegument_protein_VP13_14__YP_068328__Suid_alphaherpesvirus_1__10345__D439-734

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03362.19 best	Herpes_UL47	173.8	8.20e-51	90.4%	75.5%