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tegument_protein_VP13_14
Euk-VirEquid_alphaherpesvirus_1
tegument_protein_VP13_14__YP_053058__Equid_alphaherpesvirus_1__10326
Identity
- Accession:
- YP_053058 ↗
- Protein ID:
- tegument_protein_VP13_14
- Kingdom:
- euk
Quality
67.9
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Equid_alphaherpesvirus_1
TaxID: 10326
Cluster
View cluster (31 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 408-584
Domain cluster:
rep: tegument_protein_VP13_14__NP_040134__Human_alphaherpesvirus_3__10335__D404-464_489-536_676-686_746-787
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03362.19 best | Herpes_UL47 | 74.8 | 8.80e-21 | 100.0% | 37.7% |
D2
medium
residues 585-718
Domain cluster:
rep: tegument_protein_VP13_14__YP_443894__Papiine_alphaherpesvirus_2__340907__D395-497
D3
medium
residues 719-862
Domain cluster:
rep: tegument_protein_VP13_14__YP_009137122__Human_alphaherpesvirus_1__10298__D526-618_648-683
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03362.19 best | Herpes_UL47 | 63.6 | 2.30e-17 | 85.4% | 18.9% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kjxD01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.51 | 23.0 | 3.26e-01 | 92.4% | 93.4% |
| 7dg2C01 | 1.10.10.1200 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › MAGE homology domain, winged helix WH1 motif | 0.51 | 28.0 | 3.66e-01 | 93.8% | 100.0% |
| 1chuA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.51 | 29.0 | 3.57e-01 | 100.0% | 89.8% |
| 2oy9A01 | 1.10.220.80 | Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › BH2638-like | 0.50 | 27.0 | 3.64e-01 | 97.2% | 100.0% |
ECOD (1)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3902312 | 3651.1.1.1 ↗ | alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › IF-2B | 0.52 | 30.0 | 3.06e-01 | 85.4% | 55.2% |