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tegument_protein_VP22
Euk-VirCercopithecine_alphaherpesvirus_9
tegument_protein_VP22__NP_077424__Cercopithecine_alphaherpesvirus_9__35246
Identity
- Accession:
- NP_077424 ↗
- Protein ID:
- tegument_protein_VP22
- Kingdom:
- euk
Quality
59.4
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Varicellovirus›
Cercopithecine_alphaherpesvirus_9
TaxID: 35246
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 149-245
Domain cluster:
rep: tegument_protein_VP22__YP_068326__Suid_alphaherpesvirus_1__10345__D169-239
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04823.18 best | Herpes_UL49_2 | 136.5 | 3.80e-40 | 93.8% | 94.8% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.57 | 39.0 | 3.45e-01 | 70.1% | 61.4% |
| 2yksA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.57 | 40.0 | 3.80e-01 | 73.2% | 74.4% |
| 1wwiA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.56 | 41.0 | 3.56e-01 | 77.3% | 93.2% |
| 2ckwA04 | 1.20.960.20 | Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › | 0.51 | 29.0 | 2.85e-01 | 76.3% | 49.5% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1563561 | 4302.1.1.1 ↗ | a+b duplicates or obligate multimers › BLRF2-like › BLRF2-like › BLRF2-like › Herpes_UL49_2 | 0.88 | 78.0 | 8.14e-01 | 93.8% | 100.0% |
| 3693314 | 4121.1.1.0 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like | 0.59 | 42.0 | 2.83e-01 | 72.2% | 56.4% |
| 3708600 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.58 | 45.0 | 2.84e-01 | 82.5% | 79.2% |
| 5058654 | 601.14.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › Hemerythrin › Hemerythrin › Hemerythrin | 0.55 | 47.0 | 4.08e-01 | 95.9% | 77.4% |