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tegument_protein_VP22
Euk-VirPsittacid_alphaherpesvirus_1
tegument_protein_VP22__NP_944386__Psittacid_alphaherpesvirus_1__50294
Identity
- Accession:
- NP_944386 ↗
- Protein ID:
- tegument_protein_VP22
- Kingdom:
- euk
Quality
59.7
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Iltovirus›
Psittacid_alphaherpesvirus_1
TaxID: 50294
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 126-142_159-240
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04823.18 best | Herpes_UL49_2 | 96.6 | 1.00e-27 | 66.7% | 65.6% |
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3smvA02 | 1.10.150.750 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.65 | 28.0 | 3.22e-01 | 87.9% | 53.2% |
| 4o6mA02 | 1.20.120.1760 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CDP-alcohol phosphotransferase transmembrane (TM) domain | 0.54 | 47.0 | 3.84e-01 | 98.0% | 76.9% |
| 1n73D00 | 1.20.5.50 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.53 | 34.0 | 3.63e-01 | 74.7% | 72.2% |
| 2yksA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.53 | 37.0 | 3.53e-01 | 71.7% | 86.3% |
| 4usaA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.53 | 33.0 | 3.12e-01 | 84.8% | 52.1% |
| 5nl6B01 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 38.0 | 3.63e-01 | 77.8% | 84.3% |
| 4hfkB00 | 1.20.120.1620 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.51 | 31.0 | 3.20e-01 | 76.8% | 61.2% |
| 2qnlA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.51 | 41.0 | 3.56e-01 | 94.9% | 54.3% |
| 2kq9A00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.51 | 37.0 | 3.59e-01 | 77.8% | 92.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1563561 | 4302.1.1.1 ↗ | a+b duplicates or obligate multimers › BLRF2-like › BLRF2-like › BLRF2-like › Herpes_UL49_2 | 0.89 | 69.0 | 7.26e-01 | 79.8% | 100.0% |
| 3282465 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.64 | 47.0 | 4.79e-01 | 75.8% | 86.3% |
| 3577230 | 604.1.1.5 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_3 | 0.52 | 39.0 | 3.86e-01 | 77.8% | 92.4% |
| 3451562 | 102.1.4.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › Nop C-terminal domain | 0.50 | 36.0 | 3.74e-01 | 100.0% | 78.9% |
| 4175971 | 604.3.1.43 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › FliX | 0.50 | 35.0 | 3.72e-01 | 76.8% | 81.1% |