tegument_protein

Euk-Vir

Vombatid_gammaherpesvirus_1

tegument_protein__YP_010087432__Vombatid_gammaherpesvirus_1__2052651

Identity

76.8 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Manticavirus› Vombatid_gammaherpesvirus_1

TaxID: 2052651

View cluster (39 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 648-843_858-876

PDB

Domain cluster: rep: ORF63__YP_010084430__Retroperitoneal_fibromatosis-associated_herpesvirus__111469__D640-805

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04523.19 best	Herpes_U30	64.3	9.00e-18	95.3%	18.2%

D2 medium residues 1-185

PDB

Domain cluster: rep: tegument_protein__YP_010087505__Phascolarctid_gammaherpesvirus_1__2249313__D1-176

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04523.19 best	Herpes_U30	47.8	8.40e-13	95.1%	18.3%

D3 medium residues 186-286

PDB

Domain cluster: rep: tegument_protein__YP_004207899__Cricetid_gammaherpesvirus_2__1605972__D167-279

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04523.19 best	Herpes_U30	26.4	2.40e-06	100.0%	11.6%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5jj6B01	1.25.40.10	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain	0.54	36.0	3.71e-01	84.2%	70.8%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1840703	109.4.1.210 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_19	0.57	37.0	3.82e-01	83.2%	70.2%
3283447	5082.1.1.1 ↗	alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux	0.51	35.0	2.87e-01	71.3%	79.5%

D4 medium residues 287-452

PDB

Domain cluster: rep: JM123__YP_238426__Macaca_fuscata_rhadinovirus__272551__D339-466

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04523.19 best	Herpes_U30	75.5	3.70e-21	93.4%	16.4%

D5 medium residues 496-647

PDB

Domain cluster: rep: JM123__YP_238426__Macaca_fuscata_rhadinovirus__272551__D499-654

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04523.19 best	Herpes_U30	106.4	1.70e-30	100.0%	16.7%