←Back to structures
tegument_serine_threonine_protein_kinase
Euk-VirRhinolophus_gammaherpesvirus_1
tegument_serine_threonine_protein_kinase__YP_009551846__Rhinolophus_gammaherpesvirus_1__2054179
Identity
- Accession:
- YP_009551846 ↗
- Protein ID:
- tegument_serine_threonine_protein_kinase
- Kingdom:
- euk
Quality
88.8
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Percavirus›
Rhinolophus_gammaherpesvirus_1
TaxID: 2054179
Cluster
View cluster (78 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 60-165_220-264
Domain cluster:
rep: ORF36__YP_438159__Ovine_gammaherpesvirus_2__10398__D54-226
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qnyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.63 | 40.0 | 4.50e-01 | 79.5% | 81.5% |
| 1golA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 41.0 | 4.40e-01 | 80.8% | 77.3% |
| 3mmlF01 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.62 | 33.0 | 4.38e-01 | 70.9% | 97.5% |
| 1hi9A02 | 3.30.1360.130 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Dipeptide transport protein | 0.61 | 31.0 | 4.24e-01 | 72.2% | 97.4% |
| 3va7A05 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.58 | 37.0 | 4.50e-01 | 76.8% | 98.0% |
| 3w0eA00 | 3.30.10.10 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › Trypsin Inhibitor V, subunit A | 0.56 | 19.0 | 2.86e-01 | 93.4% | 67.6% |
| 2g47A03 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.52 | 39.0 | 3.48e-01 | 80.1% | 74.9% |
| 3cgiA00 | 3.30.70.1710 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › BMC (bacterial microcompartment) domain | 0.50 | 30.0 | 3.44e-01 | 72.2% | 79.5% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3716840 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.70 | 56.0 | 4.06e-01 | 83.4% | 49.9% |
| 5010657 | 206.1.1.9 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › RIO1 | 0.70 | 48.0 | 4.66e-01 | 70.2% | 85.3% |
| 3947242 | 206.1.1.14 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › ABC1 | 0.69 | 60.0 | 4.43e-01 | 90.1% | 51.8% |
| 3609530 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.67 | 57.0 | 4.20e-01 | 88.7% | 71.1% |
| 4670030 | 206.1.2.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › SAICAR_synt | 0.67 | 49.0 | 4.14e-01 | 74.8% | 100.0% |
| 3208474 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.66 | 54.0 | 4.31e-01 | 84.1% | 66.4% |
| 3210617 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 52.0 | 4.27e-01 | 82.1% | 63.9% |
| 3632308 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 52.0 | 3.95e-01 | 82.1% | 56.6% |
| 3202184 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 52.0 | 3.93e-01 | 82.1% | 58.7% |
| 4434453 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.64 | 49.0 | 4.20e-01 | 78.8% | 58.2% |
| 3195765 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.64 | 51.0 | 4.21e-01 | 83.4% | 72.5% |
| 3732837 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.63 | 53.0 | 4.20e-01 | 86.1% | 63.6% |
| 4355829 | 206.1.2.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › SAICAR_synt | 0.63 | 47.0 | 3.78e-01 | 78.1% | 100.0% |
| 3287097 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.63 | 50.0 | 4.07e-01 | 83.4% | 70.7% |
| 3723206 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.62 | 51.0 | 4.15e-01 | 83.4% | 66.3% |
| 3637257 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.62 | 52.0 | 4.02e-01 | 87.4% | 95.7% |
| 148544 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.62 | 50.0 | 3.89e-01 | 84.1% | 85.0% |
| 184277 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.61 | 50.0 | 3.92e-01 | 84.8% | 87.3% |
| 1229147 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.61 | 49.0 | 3.87e-01 | 84.1% | 84.8% |
| 3381813 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.61 | 49.0 | 3.56e-01 | 83.4% | 82.0% |
| 1839315 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.61 | 50.0 | 3.89e-01 | 84.8% | 81.6% |
| 3690770 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.61 | 48.0 | 3.53e-01 | 80.1% | 75.2% |
| 3732119 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.61 | 46.0 | 4.87e-01 | 86.8% | 86.7% |
| 4998448 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.61 | 49.0 | 3.67e-01 | 86.1% | 82.6% |
| 3973906 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.60 | 49.0 | 3.94e-01 | 84.1% | 90.5% |
| 3192509 | 206.1.2.3 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › IPK | 0.60 | 47.0 | 3.78e-01 | 80.8% | 89.3% |
| 3689719 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.60 | 52.0 | 4.13e-01 | 91.4% | 96.9% |
| 3196501 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.60 | 47.0 | 3.73e-01 | 80.1% | 84.9% |
| 3202619 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.59 | 47.0 | 3.72e-01 | 81.5% | 91.5% |
| 3957806 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.59 | 47.0 | 3.71e-01 | 84.1% | 79.0% |
| 3197882 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.59 | 50.0 | 3.88e-01 | 88.7% | 95.1% |
| 3280755 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.59 | 47.0 | 3.73e-01 | 84.1% | 82.6% |
| None | — | 0.58 | 49.0 | 3.86e-01 | 88.7% | 93.8% | |
| 4527337 | 206.1.2.4 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › Ins_P5_2-kin | 0.58 | 44.0 | 3.61e-01 | 79.5% | 94.5% |
| 3210081 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.58 | 48.0 | 3.47e-01 | 87.4% | 73.4% |
| 3634756 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.58 | 46.0 | 3.88e-01 | 84.1% | 98.0% |
| 4087263 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.57 | 48.0 | 3.62e-01 | 86.8% | 88.4% |
| 4260517 | 243.18.1.0 ↗ | a+b two layers › Cystatin-like › Maltokinase N-terminal domain › Maltokinase N-terminal domain | 0.57 | 47.0 | 3.32e-01 | 86.8% | 69.8% |
| 4019950 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.57 | 45.0 | 3.29e-01 | 82.8% | 84.9% |
| 3987244 | 206.1.1.10 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Choline_kinase | 0.57 | 45.0 | 3.64e-01 | 84.1% | 86.3% |
| 3594768 | 206.1.2.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase | 0.57 | 52.0 | 4.16e-01 | 100.0% | 81.0% |
| 3971808 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.56 | 45.0 | 3.28e-01 | 82.1% | 89.6% |
| 5030997 | 206.1.1.17 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Kdo | 0.56 | 53.0 | 4.26e-01 | 100.0% | 92.0% |
| 3203168 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.56 | 51.0 | 4.05e-01 | 97.4% | 98.3% |
| 3283407 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.55 | 44.0 | 3.55e-01 | 84.1% | 85.5% |
| 3693493 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.54 | 50.0 | 3.97e-01 | 98.7% | 97.9% |
| None | — | 0.53 | 49.0 | 4.03e-01 | 100.0% | 66.2% | |
| 4442155 | 206.1.1.76 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1, Pkinase_fungal | 0.52 | 41.0 | 3.36e-01 | 83.4% | 76.1% |
D2
medium
residues 166-219_265-328_421-444
D3
medium
residues 329-420
Domain cluster:
rep: tegument_serine_threonine_protein_kinase__YP_010085911__Wood_mouse_herpesvirus__432370__D304-430
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8gtzA03 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.64 | 53.0 | 4.26e-01 | 89.1% | 58.0% |
| 1w36C06 | 1.10.10.990 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.64 | 44.0 | 4.89e-01 | 75.0% | 91.7% |
| 1bvp103 | 1.10.170.10 | Mainly Alpha › Orthogonal Bundle › Bluetongue Virus 10, subunit 1; domain 3 › Bluetongue Virus 10, subunit 1, domain 3 | 0.63 | 36.0 | 3.57e-01 | 85.9% | 54.2% |
| 2kiwA01 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.61 | 50.0 | 5.15e-01 | 89.1% | 96.5% |
| 3cllA00 | 1.20.1080.10 | Mainly Alpha › Up-down Bundle › Glycerol uptake facilitator protein › Glycerol uptake facilitator protein. | 0.60 | 46.0 | 3.43e-01 | 81.5% | 46.9% |
| 3n00A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.60 | 49.0 | 3.97e-01 | 90.2% | 82.1% |
| 3owaA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.59 | 41.0 | 3.58e-01 | 70.7% | 58.0% |
| 3mk7A00 | 1.20.210.10 | Mainly Alpha › Up-down Bundle › Cytochrome C Oxidase; Chain A › Cytochrome c oxidase-like, subunit I domain | 0.59 | 41.0 | 2.63e-01 | 71.7% | 47.9% |
| 2a9uA01 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.58 | 38.0 | 3.41e-01 | 93.5% | 48.4% |
| 7dwqL01 | 1.20.1240.10 | Mainly Alpha › Up-down Bundle › Photosystem 1 Reaction Centre Subunit Xi; Chain: L; › Photosystem I PsaL, reaction centre subunit XI | 0.58 | 43.0 | 3.91e-01 | 79.3% | 88.8% |
| 1pw4A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.57 | 42.0 | 3.32e-01 | 80.4% | 81.8% |
| 6nsjA00 | 1.25.40.600 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › AmiS/UreI transporter | 0.56 | 40.0 | 3.24e-01 | 73.9% | 75.3% |
| 3hw5B00 | 3.40.91.90 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › Influenza RNA-dependent RNA polymerase subunit PA, endonuclease domain | 0.56 | 50.0 | 4.00e-01 | 98.9% | 97.8% |
| 2a3qA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.56 | 40.0 | 3.71e-01 | 100.0% | 60.2% |
| 7oq4Z01 | 1.20.120.950 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein DUF5062 | 0.55 | 37.0 | 3.63e-01 | 77.2% | 63.3% |
| 2vixA03 | 1.20.1280.240 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.55 | 45.0 | 4.25e-01 | 95.7% | 75.2% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.54 | 47.0 | 4.06e-01 | 98.9% | 63.8% |
| 1i6zA00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.54 | 39.0 | 3.46e-01 | 76.1% | 77.0% |
| 4agsB04 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 42.0 | 3.76e-01 | 84.8% | 100.0% |
| 3a0oA02 | 1.50.10.100 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase | 0.54 | 44.0 | 3.02e-01 | 92.4% | 87.4% |
| 1e3pA02 | 1.10.10.400 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain | 0.53 | 41.0 | 4.30e-01 | 85.9% | 95.2% |
| 4gf0A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 34.0 | 3.21e-01 | 70.7% | 53.1% |
| 1ujoA00 | 1.10.418.10 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Calponin-like domain | 0.53 | 33.0 | 2.90e-01 | 81.5% | 40.3% |
| 1g03A00 | 1.10.375.10 | Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein | 0.53 | 36.0 | 3.23e-01 | 92.4% | 48.5% |
| 3nzpB03 | 1.20.58.930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 41.0 | 4.35e-01 | 83.7% | 96.2% |
| 2ozbB01 | 1.10.287.4070 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 45.0 | 3.99e-01 | 93.5% | 83.2% |
| 5ljmA00 | 1.20.58.2190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 45.0 | 3.55e-01 | 97.8% | 49.3% |
| 2yykA01 | 1.10.3140.10 | Mainly Alpha › Orthogonal Bundle › 4-hydroxybutyryl-coa dehydratase, domain 1 › 4-hydroxybutyryl-coa dehydratase, domain 1 | 0.52 | 39.0 | 3.53e-01 | 83.7% | 79.6% |
| 4n5cD06 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.51 | 37.0 | 3.47e-01 | 76.1% | 78.8% |
| 2b7oA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.51 | 41.0 | 2.87e-01 | 92.4% | 80.9% |
| 2xzeB00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.50 | 37.0 | 3.24e-01 | 77.2% | 60.9% |
| 2vs0A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.50 | 32.0 | 3.40e-01 | 93.5% | 72.0% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3720209 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 45.0 | 2.80e-01 | 77.2% | 15.0% |
| 3730442 | 5050.1.1.50 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › DUF1275 | 0.58 | 46.0 | 3.38e-01 | 85.9% | 50.0% |
| 3882899 | 129.1.1.23 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › LMBR1 | 0.57 | 42.0 | 3.11e-01 | 79.3% | 80.4% |
| 4530180 | 621.1.1.0 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain | 0.57 | 42.0 | 3.80e-01 | 79.3% | 80.0% |
| 3274412 | 109.4.1.101 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CENP-I | 0.56 | 47.0 | 2.82e-01 | 92.4% | 15.9% |
| 5018995 | 1079.1.1.5 ↗ | alpha complex topology › Transmembrane reductase CcdA › Transmembrane reductase CcdA › Transmembrane reductase CcdA › DsbD_2 | 0.56 | 39.0 | 3.04e-01 | 73.9% | 91.8% |
| 3659245 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.55 | 44.0 | 3.46e-01 | 87.0% | 88.5% |
| 1163733 | 109.2.1.34 ↗ | alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid › DUF4962 | 0.54 | 44.0 | 3.01e-01 | 92.4% | 87.2% |
| 4990279 | 5069.1.1.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes | 0.53 | 42.0 | 3.25e-01 | 88.0% | 79.1% |
| 4068922 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.53 | 38.0 | 3.65e-01 | 75.0% | 97.1% |
| 3783116 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 38.0 | 4.08e-01 | 98.9% | 86.3% |
| 3573843 | 3291.1.1.95 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Nas2_N | 0.53 | 35.0 | 3.12e-01 | 93.5% | 45.7% |
| 3801482 | 633.12.1.0 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like | 0.52 | 43.0 | 3.85e-01 | 93.5% | 88.9% |
| 3626320 | 3919.1.1.2 ↗ | alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › COMM_HN | 0.52 | 39.0 | 3.76e-01 | 82.6% | 92.7% |
| 3598856 | 5054.1.1.0 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels | 0.51 | 43.0 | 3.24e-01 | 94.6% | 52.7% |
| 3692021 | 5059.1.1.33 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA, SLC35F | 0.51 | 44.0 | 3.16e-01 | 100.0% | 41.3% |
| 3696912 | 101.1.2.88 ↗ | alpha arrays › HTH › HTH › winged helix domain › Dimerisation | 0.51 | 39.0 | 3.23e-01 | 95.7% | 46.9% |