←Back to structures
term1_saliva_scaffold_14_prodigal-single.1__X__X__00021
Bact-Virterm1_saliva_scaffold_14_prodigal-single.1__X__X__00021
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 127-165_335-374
Domain cluster:
representative
D2
medium
residues 166-334
Domain cluster:
rep: N5_271_007G1_scaffold_5_prodigal-single.1__X__X__00163__D70-237
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xmxA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.72 | 40.0 | 4.26e-01 | 85.2% | 61.1% |
| 2vldA02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.71 | 33.0 | 4.13e-01 | 77.5% | 69.7% |
| 5t3oA02 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 30.0 | 3.29e-01 | 93.5% | 60.4% |
| 3b5iB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 37.0 | 3.29e-01 | 89.9% | 45.3% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4931034 | 2008.1.1.5 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NucS_C | 0.72 | 34.0 | 4.08e-01 | 77.5% | 66.1% |
| 3285722 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.71 | 54.0 | 5.13e-01 | 84.6% | 67.7% |
| 3284727 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.65 | 35.0 | 4.79e-01 | 86.4% | 100.0% |
| 4946789 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.62 | 38.0 | 3.42e-01 | 89.3% | 44.2% |
| 4937277 | 2008.1.1.108 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF234 | 0.56 | 37.0 | 4.14e-01 | 82.8% | 84.4% |
| 4060516 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.52 | 33.0 | 3.88e-01 | 84.6% | 93.0% |
| 3241202 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.51 | 39.0 | 3.54e-01 | 79.3% | 81.8% |
| 3929484 | 2008.6.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Acetyl-CoA carboxylase AC4 and AC5 domains › Acetyl-CoA carboxylase AC4 and AC5 domains | 0.51 | 40.0 | 3.66e-01 | 85.2% | 91.9% |
| 4006806 | 2008.1.1.51 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › McrBC | 0.50 | 42.0 | 4.21e-01 | 88.2% | 89.6% |