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term1_saliva_scaffold_14_prodigal-single.1__X__X__00044
Bact-Virterm1_saliva_scaffold_14_prodigal-single.1__X__X__00044
Identity
- Kingdom:
- phage
Quality
73.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 95-265
Domain cluster:
rep: NC_073481.1__YP_010756090.1__QEJ66_gp08__00008__D21-190
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18013.7 best | Phage_lysozyme2 | 87.1 | 1.80e-24 | 85.4% | 89.0% |
D2
high
residues 299-477
Domain cluster:
rep: NC_028697.1__YP_009191553.1__AU092_gp46__00046__D5-141
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4eq8A00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.73 | 55.0 | 5.86e-01 | 100.0% | 86.7% |
| 4cshA00 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.67 | 55.0 | 5.79e-01 | 100.0% | 93.9% |
| 4f88102 | 3.90.1720.60 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › | 0.64 | 52.0 | 4.89e-01 | 100.0% | 71.4% |
| 2vobB02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.62 | 54.0 | 5.11e-01 | 99.4% | 77.6% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 37.0 | 4.36e-01 | 88.3% | 86.4% |
| 4ry2A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.60 | 42.0 | 4.68e-01 | 96.1% | 90.8% |
| 6tdyD01 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 22.0 | 3.43e-01 | 93.9% | 88.0% |
| 1vjvA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.53 | 40.0 | 3.39e-01 | 78.8% | 98.3% |
| 2gu3A01 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 20.0 | 3.06e-01 | 89.4% | 92.3% |
| 3c9aA03 | 2.20.20.160 | Mainly Beta › Single Sheet › Anthopleurin-A › | 0.50 | 19.0 | 2.75e-01 | 80.4% | 74.6% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1064055 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.73 | 55.0 | 5.93e-01 | 100.0% | 89.5% |
| 3279614 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.72 | 53.0 | 5.72e-01 | 100.0% | 87.1% |
| 5018860 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.64 | 51.0 | 5.51e-01 | 89.9% | 98.7% |
| 3615154 | 219.1.1.28 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › CHAP | 0.62 | 56.0 | 5.56e-01 | 98.3% | 93.5% |
| 3574238 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.56 | 29.0 | 3.66e-01 | 100.0% | 86.0% |
| 3881119 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.55 | 25.0 | 3.52e-01 | 70.9% | 91.3% |
| 5030431 | 219.1.1.51 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C39_2 | 0.55 | 47.0 | 4.69e-01 | 100.0% | 87.4% |
| 3999723 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 33.0 | 3.54e-01 | 95.0% | 69.3% |
| 3195050 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.54 | 27.0 | 3.56e-01 | 77.7% | 87.4% |
| 3393319 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.54 | 28.0 | 3.39e-01 | 76.5% | 75.5% |
| 3627842 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 26.0 | 3.49e-01 | 71.5% | 88.9% |
| 3244430 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.53 | 29.0 | 3.60e-01 | 100.0% | 86.7% |
| 3920666 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.52 | 26.0 | 3.40e-01 | 71.5% | 88.9% |
| 3576128 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 28.0 | 3.38e-01 | 100.0% | 78.3% |
| 3407821 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.51 | 24.0 | 3.29e-01 | 74.3% | 89.4% |
| 2141735 | 219.1.1.69 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GtgE | 0.51 | 47.0 | 4.60e-01 | 100.0% | 94.4% |