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term1_saliva_scaffold_14_prodigal-single.1__X__X__00103
Bact-Virterm1_saliva_scaffold_14_prodigal-single.1__X__X__00103
Identity
- Kingdom:
- phage
Quality
72.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-94
Domain cluster:
representative
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1m3qA01 | 3.30.310.40 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.70 | 54.0 | 5.49e-01 | 96.7% | 84.3% |
| 2jpiA00 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.69 | 54.0 | 5.39e-01 | 100.0% | 80.2% |
| 2ns9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.65 | 58.0 | 4.96e-01 | 100.0% | 93.2% |
| 6v04A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.64 | 57.0 | 5.11e-01 | 100.0% | 96.9% |
| 2d0bA01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.64 | 44.0 | 4.48e-01 | 98.9% | 73.0% |
| 4xrtA02 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 55.0 | 4.67e-01 | 100.0% | 91.9% |
| 3tfzB00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.63 | 55.0 | 4.58e-01 | 100.0% | 90.9% |
| 1d1jB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.62 | 47.0 | 4.08e-01 | 79.1% | 72.1% |
| 1j3mA00 | 3.30.310.70 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TT1751-like domain | 0.62 | 55.0 | 4.94e-01 | 98.9% | 100.0% |
| 2n54B00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.62 | 32.0 | 3.65e-01 | 80.2% | 66.7% |
| 3a8uX01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.61 | 42.0 | 3.53e-01 | 100.0% | 40.6% |
| 3f0zA01 | 3.30.310.260 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.61 | 56.0 | 5.20e-01 | 100.0% | 87.5% |
| 1cqaA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.60 | 45.0 | 4.09e-01 | 79.1% | 71.5% |
| 4qwoB00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.60 | 45.0 | 3.98e-01 | 79.1% | 68.9% |
| 1yprA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.59 | 44.0 | 3.98e-01 | 79.1% | 68.0% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 45.0 | 4.07e-01 | 83.5% | 92.9% |
| 1xkpC00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.58 | 47.0 | 4.22e-01 | 100.0% | 63.5% |
| 2xvlA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.58 | 44.0 | 3.26e-01 | 80.2% | 91.9% |
| 6fopA01 | 2.70.98.30 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Golgi alpha-mannosidase II; domain 4 | 0.57 | 43.0 | 3.15e-01 | 79.1% | 33.6% |
| 2hezA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.56 | 40.0 | 2.70e-01 | 73.6% | 25.1% |
| 4ba0A01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.56 | 45.0 | 3.48e-01 | 86.8% | 100.0% |
| 3ttgA00 | 3.30.1360.120 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Probable tRNA modification gtpase trme; domain 1 | 0.56 | 45.0 | 3.06e-01 | 100.0% | 23.7% |
| 2p4bB02 | 3.30.200.100 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › MucB/RseB, C-terminal domain | 0.55 | 43.0 | 4.27e-01 | 85.7% | 99.0% |
| 4wj7D00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 41.0 | 3.71e-01 | 79.1% | 82.9% |
| 3lxqA01 | 3.30.1120.80 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.53 | 44.0 | 4.28e-01 | 89.0% | 88.9% |
| 4xpmB00 | 3.40.1840.10 | Alpha Beta › 3-Layer(aba) Sandwich › Profilin-like › YNR034W-A-like | 0.53 | 35.0 | 4.09e-01 | 78.0% | 92.5% |
| 5f7uA02 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.53 | 43.0 | 3.31e-01 | 91.2% | 95.6% |
| 3nvnA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.53 | 36.0 | 2.40e-01 | 70.3% | 36.0% |
| 3ruyA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 41.0 | 3.60e-01 | 97.8% | 54.5% |
| 2f2hA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.52 | 42.0 | 3.20e-01 | 92.3% | 91.0% |
| 2v7sA00 | 3.30.2030.20 | Alpha Beta › 2-Layer Sandwich › TBP-like › | 0.51 | 40.0 | 3.36e-01 | 86.8% | 52.7% |
| 2o3iA02 | 2.40.390.10 | Mainly Beta › Beta Barrel › CV3147-like › CV3147-like | 0.51 | 36.0 | 3.29e-01 | 75.8% | 81.7% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5045916 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.78 | 50.0 | 6.06e-01 | 93.4% | 100.0% |
| 5003276 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.77 | 53.0 | 6.19e-01 | 96.7% | 100.0% |
| 3992641 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.77 | 52.0 | 5.88e-01 | 89.0% | 91.4% |
| 3409029 | 331.23.1.2 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › IntS9_C | 0.76 | 56.0 | 6.10e-01 | 93.4% | 94.6% |
| 4941285 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.74 | 54.0 | 6.09e-01 | 95.6% | 100.0% |
| 5083698 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.73 | 51.0 | 5.79e-01 | 92.3% | 100.0% |
| 3332318 | 331.2.1.11 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › COR-B | 0.72 | 66.0 | 5.10e-01 | 100.0% | 51.1% |
| 3652146 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.71 | 65.0 | 5.05e-01 | 100.0% | 50.5% |
| 3783714 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.71 | 54.0 | 5.90e-01 | 95.6% | 98.7% |
| 4178706 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.70 | 56.0 | 5.55e-01 | 100.0% | 82.1% |
| 184669 | 331.2.1.2 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › DUF2218 | 0.69 | 54.0 | 5.39e-01 | 100.0% | 80.2% |
| 3236723 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.69 | 41.0 | 3.03e-01 | 80.2% | 23.0% |
| 4938245 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.69 | 53.0 | 5.77e-01 | 100.0% | 97.3% |
| 3805333 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.69 | 63.0 | 4.85e-01 | 100.0% | 48.5% |
| 3628751 | 331.18.1.0 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc | 0.69 | 62.0 | 4.93e-01 | 100.0% | 50.3% |
| 4992891 | 331.16.1.1 ↗ | a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 | 0.69 | 62.0 | 6.00e-01 | 100.0% | 88.0% |
| 3889564 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.68 | 61.0 | 5.02e-01 | 100.0% | 55.6% |
| 4995145 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.67 | 52.0 | 5.38e-01 | 98.9% | 90.6% |
| 5063295 | 331.16.1.1 ↗ | a+b two layers › TBP-like › TA0095-like › TA0095-like › DUF5611 | 0.67 | 60.0 | 5.85e-01 | 100.0% | 90.0% |
| 3548690 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.67 | 48.0 | 5.22e-01 | 90.1% | 90.7% |
| 3869277 | 331.18.1.0 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc | 0.67 | 60.0 | 4.78e-01 | 100.0% | 51.4% |
| 3228574 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.66 | 39.0 | 2.82e-01 | 78.0% | 21.3% |
| 5048592 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.66 | 58.0 | 5.19e-01 | 100.0% | 91.5% |
| 3973141 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.66 | 55.0 | 5.59e-01 | 100.0% | 94.4% |
| 3578119 | 331.18.1.0 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc | 0.64 | 57.0 | 4.55e-01 | 100.0% | 51.9% |
| 3565109 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.63 | 57.0 | 4.52e-01 | 100.0% | 51.9% |
| 4049704 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.63 | 47.0 | 4.20e-01 | 79.1% | 70.0% |
| 4004064 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.63 | 57.0 | 4.97e-01 | 100.0% | 67.4% |
| 3952440 | 881.1.1.8 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C | 0.62 | 46.0 | 3.78e-01 | 79.1% | 43.2% |
| 5051108 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.62 | 54.0 | 4.87e-01 | 100.0% | 87.7% |
| 3403609 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.61 | 46.0 | 4.89e-01 | 91.2% | 94.9% |
| 5000881 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 46.0 | 3.80e-01 | 79.1% | 52.3% |
| 3955307 | 881.1.1.8 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PknH_C | 0.61 | 47.0 | 3.79e-01 | 82.4% | 43.1% |
| 4027162 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.60 | 45.0 | 2.93e-01 | 80.2% | 97.6% |
| 3226791 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.60 | 44.0 | 4.01e-01 | 79.1% | 68.8% |
| 4964910 | 300.1.1.25 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease › TbsP_N | 0.59 | 44.0 | 3.85e-01 | 79.1% | 83.6% |
| 3928306 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.59 | 44.0 | 3.84e-01 | 79.1% | 63.3% |
| 3209295 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.58 | 44.0 | 3.84e-01 | 79.1% | 70.4% |
| 3470353 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.58 | 43.0 | 3.91e-01 | 79.1% | 67.2% |
| 3250283 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.58 | 44.0 | 3.95e-01 | 80.2% | 66.9% |
| 3537449 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.58 | 44.0 | 3.90e-01 | 79.1% | 69.0% |
| 3979335 | 241.1.1.0 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone | 0.58 | 43.0 | 3.97e-01 | 100.0% | 60.8% |
| 3270933 | 223.2.1.1 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Profilin | 0.57 | 43.0 | 3.87e-01 | 79.1% | 65.6% |
| 3445390 | 305.2.1.0 ↗ | a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) | 0.57 | 49.0 | 4.62e-01 | 97.8% | 82.6% |
| 3783819 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.57 | 46.0 | 3.14e-01 | 100.0% | 22.2% |
| 4946203 | 3794.1.1.7 ↗ | a+b two layers › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Methylcrotonyl-CoA carboxylase alpha-subunit BT domain-related › Barrel domain in methylcrotonyl-CoA carboxylase alpha-subunit › Biotin_lipoyl | 0.57 | 40.0 | 4.44e-01 | 96.7% | 89.3% |
| 142929 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.56 | 42.0 | 3.32e-01 | 79.1% | 94.2% |
| 4385221 | 3943.1.1.0 ↗ | beta sandwiches › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains › Flagellar hook-associated protein 1 beta-sandwich domains | 0.56 | 44.0 | 4.06e-01 | 84.6% | 98.3% |
| 3286489 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.55 | 44.0 | 3.39e-01 | 87.9% | 95.7% |
| 3605770 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.52 | 45.0 | 3.46e-01 | 98.9% | 84.1% |
| 3939128 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 35.0 | 3.37e-01 | 72.5% | 93.6% |
| 3602698 | 4312.1.1.3 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › ParE_toxin | 0.51 | 38.0 | 3.95e-01 | 79.1% | 90.6% |
| 4946587 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.50 | 38.0 | 3.52e-01 | 84.6% | 90.0% |