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term1_saliva_scaffold_14_prodigal-single.1__X__X__00131
Bact-Virterm1_saliva_scaffold_14_prodigal-single.1__X__X__00131
Identity
- Kingdom:
- phage
Quality
56.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-102
Domain cluster:
rep: term4_saliva_scaffold_5_prodigal-single.1__X__X__00174__D1-69_84-106
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4x9cD00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 39.0 | 4.63e-01 | 90.0% | 76.7% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 38.0 | 4.66e-01 | 90.0% | 83.9% |
| 2vb6A01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.66 | 38.0 | 4.66e-01 | 100.0% | 92.6% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.66 | 40.0 | 3.64e-01 | 95.6% | 43.2% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 38.0 | 4.21e-01 | 100.0% | 71.2% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 38.0 | 4.30e-01 | 96.7% | 78.8% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 43.0 | 4.10e-01 | 84.4% | 61.8% |
| 2hlcA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 36.0 | 3.43e-01 | 100.0% | 48.1% |
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.61 | 41.0 | 4.01e-01 | 85.6% | 62.0% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 37.0 | 4.16e-01 | 96.7% | 81.8% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.60 | 37.0 | 4.18e-01 | 93.3% | 83.3% |
| 2lfuA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.58 | 47.0 | 4.16e-01 | 86.7% | 83.7% |
| 2a0aA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 47.0 | 4.09e-01 | 85.6% | 96.2% |
| 4mb7A01 | 3.20.190.10 | Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › MutM-like, N-terminal | 0.55 | 39.0 | 3.59e-01 | 75.6% | 87.3% |
| 1wnhA02 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 37.0 | 3.41e-01 | 70.0% | 80.0% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.55 | 37.0 | 3.46e-01 | 97.8% | 56.0% |
| 4jerA00 | 3.30.1500.10 | Alpha Beta › 2-Layer Sandwich › Heme-binding Protein A; Chain: A; › Haem-binding HasA | 0.55 | 43.0 | 3.46e-01 | 85.6% | 77.3% |
| 2fwvA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 42.0 | 3.39e-01 | 85.6% | 75.8% |
| 4q5eA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 38.0 | 4.12e-01 | 74.4% | 90.7% |
| 7qrlA01 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.53 | 39.0 | 3.50e-01 | 78.9% | 89.6% |
| 4kh8A01 | 2.40.128.540 | Mainly Beta › Beta Barrel › Lipocalin › Domain of unknown function DUF4822 | 0.52 | 46.0 | 3.77e-01 | 97.8% | 77.1% |
| 4bj8K00 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.52 | 43.0 | 3.96e-01 | 90.0% | 95.0% |
| 6jn7A01 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.52 | 38.0 | 3.11e-01 | 77.8% | 69.1% |
| 6u5vB07 | 3.30.1120.100 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.52 | 43.0 | 3.82e-01 | 88.9% | 82.2% |
| 2in5A00 | 2.40.360.10 | Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like | 0.52 | 42.0 | 3.36e-01 | 91.1% | 84.1% |
| 8t5tA01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.52 | 40.0 | 3.26e-01 | 85.6% | 88.1% |
| 1zhxA03 | 2.40.160.120 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 41.0 | 3.23e-01 | 87.8% | 57.1% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3299797 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.76 | 40.0 | 4.76e-01 | 96.7% | 76.7% |
| 4844109 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.75 | 38.0 | 4.25e-01 | 88.9% | 62.0% |
| 4058174 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.74 | 43.0 | 4.97e-01 | 100.0% | 80.0% |
| 3222051 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 37.0 | 4.31e-01 | 90.0% | 69.2% |
| 3998022 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.71 | 39.0 | 4.78e-01 | 100.0% | 87.3% |
| 4936291 | 4.1.1.487 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7205 | 0.70 | 40.0 | 4.51e-01 | 90.0% | 75.4% |
| 3218198 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 36.0 | 4.51e-01 | 90.0% | 81.8% |
| 3616243 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 38.0 | 4.64e-01 | 100.0% | 89.1% |
| 5001903 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 37.0 | 4.08e-01 | 90.0% | 67.1% |
| 4953054 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 36.0 | 3.94e-01 | 90.0% | 62.7% |
| 3881119 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 38.0 | 4.05e-01 | 97.8% | 66.3% |
| 3408327 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.65 | 38.0 | 3.81e-01 | 97.8% | 57.8% |
| 3604145 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 37.0 | 4.29e-01 | 96.7% | 83.3% |
| 3260465 | 219.1.1.6 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 | 0.63 | 51.0 | 3.55e-01 | 88.9% | 57.1% |
| 3881123 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.63 | 37.0 | 3.87e-01 | 97.8% | 62.4% |
| 4973749 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 34.0 | 3.80e-01 | 90.0% | 67.1% |
| 4317035 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.62 | 37.0 | 3.86e-01 | 98.9% | 63.5% |
| 4985969 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 38.0 | 4.40e-01 | 100.0% | 90.0% |
| 3217221 | 206.1.2.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › SAICAR synthase › SAICAR_synt | 0.60 | 41.0 | 2.91e-01 | 71.1% | 77.4% |
| 3642001 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.59 | 41.0 | 4.57e-01 | 100.0% | 91.4% |
| 5021930 | 4312.1.1.22 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › PF27370 | 0.57 | 39.0 | 3.80e-01 | 70.0% | 94.0% |
| 3273105 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.57 | 46.0 | 4.38e-01 | 86.7% | 96.2% |
| 3330108 | 9.1.1.10 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › VDE | 0.57 | 47.0 | 3.68e-01 | 88.9% | 64.9% |
| 3588736 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 35.0 | 4.03e-01 | 87.8% | 86.2% |
| 3551775 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.55 | 42.0 | 3.97e-01 | 86.7% | 66.4% |
| 3263214 | 12.3.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich | 0.55 | 38.0 | 2.90e-01 | 72.2% | 95.1% |
| 5049481 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 39.0 | 3.59e-01 | 76.7% | 74.8% |
| 4977583 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.54 | 37.0 | 3.49e-01 | 71.1% | 90.0% |
| 4096596 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.52 | 35.0 | 2.31e-01 | 70.0% | 22.0% |
| 3993450 | 9.3.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like | 0.52 | 40.0 | 3.80e-01 | 84.4% | 69.1% |
| 3192185 | 6.1.1.41 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › DUF7907 | 0.51 | 42.0 | 3.52e-01 | 93.3% | 98.2% |
| 3592148 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.51 | 45.0 | 2.88e-01 | 98.9% | 74.3% |
| 3270288 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.50 | 41.0 | 3.99e-01 | 90.0% | 87.0% |
| 4600806 | 2.1.1.4 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S17 | 0.50 | 40.0 | 3.78e-01 | 86.7% | 74.5% |
| 4980080 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.50 | 36.0 | 3.21e-01 | 76.7% | 77.1% |
D2
medium
residues 133-203
D3
medium
residues 204-291