←Back to structures
term1_saliva_scaffold_14_prodigal-single.1__X__X__00139
Bact-Virterm1_saliva_scaffold_14_prodigal-single.1__X__X__00139
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-60
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ez2A01 | 1.10.1660.30 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.73 | 57.0 | 5.35e-01 | 87.5% | 85.7% |
| 1sseB00 | 1.10.238.100 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › YAP1 redox domain. Chain B | 0.67 | 51.0 | 4.54e-01 | 85.7% | 65.1% |
| 4fz2A01 | 3.40.1170.20 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › tRNA intron endonuclease, N-terminal domain | 0.63 | 48.0 | 4.43e-01 | 100.0% | 64.0% |
| 3lkdA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 44.0 | 2.88e-01 | 78.6% | 86.9% |
| 1a79A02 | 3.40.1170.20 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › tRNA intron endonuclease, N-terminal domain | 0.61 | 48.0 | 4.48e-01 | 100.0% | 67.6% |
| 1ygyA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.61 | 51.0 | 4.70e-01 | 96.4% | 98.7% |
| 3k4oA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.60 | 44.0 | 2.95e-01 | 83.9% | 27.3% |
| 2fsjA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 43.0 | 3.25e-01 | 76.8% | 83.3% |
| 3g5sA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.60 | 45.0 | 2.99e-01 | 87.5% | 63.9% |
| 5i0hA02 | 1.20.5.4820 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.59 | 46.0 | 4.30e-01 | 85.7% | 94.4% |
| 1okgA02 | 3.40.250.10 | Alpha Beta › 3-Layer(aba) Sandwich › Oxidized Rhodanese; domain 1 › Rhodanese-like domain | 0.59 | 42.0 | 3.26e-01 | 76.8% | 63.5% |
| 2ql2B00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.59 | 34.0 | 3.36e-01 | 76.8% | 52.5% |
| 2x51A06 | 3.30.70.1590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 44.0 | 4.24e-01 | 83.9% | 98.5% |
| 4cvnA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.58 | 46.0 | 3.32e-01 | 91.1% | 58.7% |
| 3tqeA02 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.58 | 48.0 | 4.50e-01 | 100.0% | 93.2% |
| 5zorA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.58 | 42.0 | 4.00e-01 | 83.9% | 71.2% |
| 1j7qA00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.56 | 43.0 | 3.81e-01 | 85.7% | 62.8% |
| 3tthB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 41.0 | 2.98e-01 | 80.4% | 64.6% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 38.0 | 3.37e-01 | 71.4% | 65.9% |
| 3ecoB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.56 | 38.0 | 3.00e-01 | 73.2% | 37.2% |
| 6uqjA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 41.0 | 2.59e-01 | 83.9% | 30.7% |
| 4yifF00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 39.0 | 3.11e-01 | 83.9% | 92.3% |
| 1t98A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 42.0 | 3.67e-01 | 87.5% | 70.1% |
| 1gkuB06 | 1.10.460.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; domain 2 › Topoisomerase I, domain 2 | 0.53 | 40.0 | 3.00e-01 | 85.7% | 96.8% |
| 1xmxA03 | 1.10.10.680 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Hypothetical protein VC1899 (Restriction endonuclease-like) | 0.52 | 38.0 | 3.34e-01 | 78.6% | 96.6% |
| 6nuiA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 37.0 | 2.64e-01 | 78.6% | 27.3% |
| 2qrrA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.52 | 41.0 | 3.63e-01 | 98.2% | 78.4% |
| 1h3dA03 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 42.0 | 4.04e-01 | 98.2% | 92.5% |
| 4byfC01 | 1.20.120.720 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain | 0.51 | 38.0 | 3.35e-01 | 83.9% | 58.4% |
| 2mc3A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 40.0 | 3.42e-01 | 94.6% | 75.7% |
ECOD (62)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2876157 | 101.1.9.105 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 | 0.80 | 63.0 | 6.44e-01 | 85.7% | 98.1% |
| 3177718 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.78 | 60.0 | 5.48e-01 | 83.9% | 74.3% |
| 4604028 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.77 | 60.0 | 4.63e-01 | 85.7% | 43.2% |
| 3590852 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.76 | 59.0 | 5.01e-01 | 87.5% | 55.8% |
| 3587522 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.75 | 59.0 | 5.54e-01 | 87.5% | 80.0% |
| 3693848 | 101.1.9.77 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PAP1 | 0.73 | 56.0 | 5.48e-01 | 83.9% | 95.0% |
| 3173849 | 101.1.9.77 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PAP1 | 0.72 | 56.0 | 5.50e-01 | 85.7% | 93.3% |
| 3205121 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 54.0 | 4.88e-01 | 85.7% | 73.8% |
| 4176315 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.70 | 52.0 | 5.32e-01 | 80.4% | 90.7% |
| 5028046 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.69 | 53.0 | 5.40e-01 | 83.9% | 92.7% |
| 3195578 | 105.1.1.0 ↗ | alpha duplicates or obligate multimers › HLH-like › HLH, helix-loop-helix DNA-binding domain › HLH, helix-loop-helix DNA-binding domain | 0.69 | 51.0 | 3.94e-01 | 82.1% | 41.5% |
| 4021723 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 52.0 | 4.44e-01 | 85.7% | 62.1% |
| 3210018 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 52.0 | 4.31e-01 | 85.7% | 56.2% |
| 4769503 | 3786.1.1.0 ↗ | 0.67 | 51.0 | 4.54e-01 | 85.7% | 65.1% | |
| 4950846 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.67 | 50.0 | 5.18e-01 | 80.4% | 100.0% |
| 4320397 | 880.1.1.1 ↗ | a+b duplicates or obligate multimers › ADC synthase › ADC synthase › ADC synthase › Chorismate_bind | 0.67 | 57.0 | 3.39e-01 | 100.0% | 44.8% |
| 5027627 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.66 | 51.0 | 5.13e-01 | 85.7% | 94.5% |
| 3289373 | 3601.1.1.0 ↗ | alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain | 0.66 | 52.0 | 3.80e-01 | 85.7% | 37.9% |
| 4965682 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.66 | 50.0 | 3.86e-01 | 85.7% | 79.1% |
| 4441682 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.65 | 56.0 | 3.43e-01 | 100.0% | 59.7% |
| 4463224 | 148.1.3.15 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_assoc_2 | 0.62 | 46.0 | 3.87e-01 | 82.1% | 54.0% |
| 3709334 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.61 | 47.0 | 4.15e-01 | 91.1% | 64.2% |
| 370290 | 242.2.1.3 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_end_N3 | 0.61 | 45.0 | 4.50e-01 | 91.1% | 77.2% |
| 3404786 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.61 | 50.0 | 3.43e-01 | 100.0% | 32.7% |
| 3607656 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.61 | 47.0 | 4.12e-01 | 91.1% | 64.2% |
| None | — | 0.61 | 46.0 | 3.03e-01 | 87.5% | 62.5% | |
| 4942507 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.60 | 46.0 | 3.66e-01 | 89.3% | 41.8% |
| 5040722 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.60 | 48.0 | 4.78e-01 | 98.2% | 85.0% |
| 4638190 | 244.1.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GIDA | 0.60 | 46.0 | 2.95e-01 | 87.5% | 59.7% |
| 3589675 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.60 | 44.0 | 4.56e-01 | 82.1% | 100.0% |
| 5046069 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 42.0 | 3.72e-01 | 75.0% | 74.1% |
| 3695449 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.60 | 51.0 | 3.29e-01 | 100.0% | 62.4% |
| 4885952 | 2003.1.2.59 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GIDA, NAD_binding_8 | 0.60 | 46.0 | 2.97e-01 | 89.3% | 48.6% |
| 4973462 | 101.1.2.297 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mrr_N | 0.59 | 44.0 | 3.50e-01 | 80.4% | 48.7% |
| None | — | 0.59 | 45.0 | 2.91e-01 | 87.5% | 62.0% | |
| 4930161 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.58 | 44.0 | 3.60e-01 | 91.1% | 42.7% |
| 4993277 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.58 | 47.0 | 3.79e-01 | 89.3% | 49.1% |
| 5064068 | 242.2.1.2 ↗ | a+b two layers › Homing endonucleases-like › tRNA-intron endonuclease N-terminal domain-like › tRNA-intron endonuclease N-terminal domain-like › tRNA_int_endo_N | 0.57 | 48.0 | 4.60e-01 | 94.6% | 80.0% |
| 3819614 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 43.0 | 3.89e-01 | 80.4% | 70.7% |
| 3279254 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.56 | 44.0 | 3.82e-01 | 83.9% | 64.7% |
| 5050746 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.55 | 42.0 | 3.46e-01 | 83.9% | 53.3% |
| 5075222 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 39.0 | 3.60e-01 | 80.4% | 73.8% |
| 4956736 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.54 | 39.0 | 3.35e-01 | 87.5% | 46.3% |
| 3442533 | 101.1.2.386 ↗ | alpha arrays › HTH › HTH › winged helix domain › WH_DRP | 0.54 | 47.0 | 3.71e-01 | 100.0% | 80.0% |
| 4024039 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.54 | 39.0 | 3.32e-01 | 82.1% | 64.8% |
| 4987588 | 304.8.1.82 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › PF27325 | 0.53 | 45.0 | 3.88e-01 | 100.0% | 82.1% |
| 5071596 | 242.4.1.2 ↗ | a+b two layers › Homing endonucleases-like › DNA polymerase II large subunit DP2 central a+b domain › DNA polymerase II large subunit DP2 central a+b domain › PolC_DP2_central | 0.53 | 40.0 | 3.63e-01 | 89.3% | 56.2% |
| 3965200 | 4333.1.1.1 ↗ | a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › Methylase_S | 0.53 | 39.0 | 2.77e-01 | 85.7% | 38.6% |
| 3955695 | 101.1.2.297 ↗ | alpha arrays › HTH › HTH › winged helix domain › Mrr_N | 0.52 | 37.0 | 3.05e-01 | 76.8% | 41.8% |
| 4992721 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.52 | 40.0 | 2.77e-01 | 83.9% | 73.3% |
| 5007117 | 2003.1.5.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › CheR | 0.52 | 37.0 | 2.62e-01 | 78.6% | 42.0% |
| 4991081 | 2003.1.9.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › CoA_transf_3 | 0.52 | 42.0 | 2.61e-01 | 94.6% | 21.3% |
| 4024141 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 36.0 | 2.57e-01 | 75.0% | 67.0% |
| 5057426 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.52 | 43.0 | 4.30e-01 | 100.0% | 91.7% |
| 4990500 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 40.0 | 3.54e-01 | 89.3% | 78.9% |
| 3815453 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.52 | 41.0 | 3.55e-01 | 89.3% | 70.0% |
| 3808197 | 101.1.2.396 ↗ | alpha arrays › HTH › HTH › winged helix domain › WHD_ROQ1 | 0.52 | 44.0 | 3.25e-01 | 92.9% | 75.7% |
| 4953298 | 101.1.2.934 ↗ | alpha arrays › HTH › HTH › winged helix domain › HVO_A0261_N | 0.52 | 39.0 | 2.96e-01 | 82.1% | 46.2% |
| 4959120 | 2003.1.5.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › CheR | 0.52 | 37.0 | 2.60e-01 | 78.6% | 42.5% |
| 3271713 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 36.0 | 3.45e-01 | 83.9% | 62.9% |
| 3968802 | 3831.1.1.1 ↗ | alpha bundles › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › Secreted protein of unknown function DUF1311 › LprI | 0.51 | 39.0 | 3.34e-01 | 87.5% | 76.5% |
| 3657853 | 101.1.1.210 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Cac1_C | 0.50 | 35.0 | 3.43e-01 | 80.4% | 66.2% |
D2
high
residues 68-140
Domain cluster:
rep: term6_saliva_scaffold_0_prodigal-single.1__X__X__00053__D60-128
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d79A01 | 3.10.450.120 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Pre-PUA domain; domain 1 | 0.66 | 40.0 | 3.99e-01 | 71.2% | 59.5% |
| 2k5iA01 | 2.30.30.90 | Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) | 0.63 | 36.0 | 3.53e-01 | 89.0% | 47.6% |
| 3t05A02 | 2.40.33.10 | Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like | 0.61 | 45.0 | 4.11e-01 | 100.0% | 58.8% |
| 4ge6A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.61 | 43.0 | 2.85e-01 | 100.0% | 17.8% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.59 | 36.0 | 3.54e-01 | 100.0% | 55.6% |
| 1orvA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.59 | 47.0 | 2.92e-01 | 90.4% | 34.5% |
| 4bb7B00 | 2.30.30.490 | Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain | 0.59 | 38.0 | 2.67e-01 | 93.2% | 20.5% |
| 7cayA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.58 | 46.0 | 4.20e-01 | 100.0% | 64.0% |
| 4ac9C04 | 2.40.10.190 | Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 | 0.57 | 44.0 | 4.32e-01 | 83.6% | 77.5% |
| 6krwA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.57 | 41.0 | 2.72e-01 | 100.0% | 18.5% |
| 1p0zA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 49.0 | 4.11e-01 | 100.0% | 55.7% |
| 2p4gA00 | 3.40.430.10 | Alpha Beta › 3-Layer(aba) Sandwich › Dihydrofolate Reductase, subunit A › Dihydrofolate Reductase, subunit A | 0.56 | 37.0 | 2.50e-01 | 100.0% | 19.8% |
| 4ckbD02 | 3.20.100.20 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › | 0.56 | 40.0 | 2.98e-01 | 76.7% | 40.0% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.56 | 50.0 | 4.17e-01 | 100.0% | 84.8% |
| 1zboA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.56 | 48.0 | 4.25e-01 | 100.0% | 97.3% |
| 1smxA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 41.0 | 3.93e-01 | 79.5% | 93.1% |
| 2aneH00 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.55 | 47.0 | 4.11e-01 | 100.0% | 62.4% |
| 3a2pA00 | 3.90.1300.10 | Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain | 0.55 | 44.0 | 2.73e-01 | 90.4% | 85.7% |
| 3gs9A01 | 6.20.110.10 | Special › Other non-globular › Thrombin, subunit H › | 0.54 | 41.0 | 4.02e-01 | 80.8% | 87.3% |
| 1agjA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 43.0 | 3.67e-01 | 93.2% | 91.0% |
| 3fbqA02 | 2.60.40.1640 | Mainly Beta › Sandwich › Immunoglobulin-like › Conserved domain protein. | 0.54 | 40.0 | 3.32e-01 | 82.2% | 70.5% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.53 | 41.0 | 3.47e-01 | 84.9% | 55.6% |
| 1s04A00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.52 | 47.0 | 4.11e-01 | 100.0% | 79.1% |
| 1g3pA02 | 3.90.450.1 | Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 | 0.52 | 36.0 | 3.30e-01 | 100.0% | 51.9% |
| 2gnxA02 | 3.30.450.240 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 45.0 | 3.97e-01 | 100.0% | 66.1% |
| 3iuzA00 | 3.10.180.50 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › | 0.52 | 35.0 | 2.37e-01 | 100.0% | 16.2% |
| 1luzA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 40.0 | 3.90e-01 | 87.7% | 88.2% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.51 | 38.0 | 3.20e-01 | 94.5% | 41.8% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.51 | 45.0 | 3.89e-01 | 100.0% | 78.6% |
| 6vbkA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.51 | 44.0 | 3.91e-01 | 100.0% | 66.7% |
| 1ywyA00 | 3.40.1170.40 | Alpha Beta › 3-Layer(aba) Sandwich › MutS, DNA mismatch repair protein, domain I › Protein of unknown function DUF3203 | 0.51 | 36.0 | 3.59e-01 | 86.3% | 74.3% |
| 2hz7A05 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.50 | 46.0 | 3.77e-01 | 100.0% | 84.4% |
| 1o70A01 | 2.30.180.10 | Mainly Beta › Roll › FAS1 domain › FAS1 domain | 0.50 | 44.0 | 3.61e-01 | 100.0% | 76.4% |
| 1vwxY00 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 37.0 | 3.01e-01 | 93.2% | 42.5% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3447770 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.74 | 38.0 | 5.01e-01 | 79.5% | 100.0% |
| 3965594 | 1.1.13.53 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage-tail_3 | 0.70 | 48.0 | 4.34e-01 | 100.0% | 53.7% |
| 4033610 | 101.35.1.5 ↗ | alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › RecX_HTH1 | 0.70 | 45.0 | 3.92e-01 | 97.3% | 43.6% |
| 3497989 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 42.0 | 4.65e-01 | 94.5% | 76.7% |
| 3660244 | 4.1.1.141 ↗ | beta barrels › SH3 › SH3 › SH3 › PTM_DIR17_Tudor | 0.64 | 42.0 | 4.17e-01 | 89.0% | 65.3% |
| 5081561 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 43.0 | 4.22e-01 | 71.2% | 100.0% |
| 3660755 | 4.8.1.21 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor | 0.62 | 41.0 | 4.14e-01 | 89.0% | 66.7% |
| 3758110 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.59 | 46.0 | 3.25e-01 | 100.0% | 26.4% |
| 3474747 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.58 | 46.0 | 2.88e-01 | 90.4% | 27.0% |
| 3588618 | 2008.1.1.155 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › CoiA_nuc | 0.58 | 47.0 | 3.79e-01 | 91.8% | 56.0% |
| 3990088 | 2008.1.1.155 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › CoiA_nuc | 0.57 | 46.0 | 3.55e-01 | 91.8% | 48.0% |
| 3220091 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 45.0 | 2.84e-01 | 87.7% | 37.9% |
| 3392739 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.56 | 44.0 | 2.82e-01 | 89.0% | 32.2% |
| 4075142 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 45.0 | 3.72e-01 | 100.0% | 48.1% |
| 4588052 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.56 | 48.0 | 3.41e-01 | 100.0% | 43.6% |
| 3409750 | 5.1.4.219 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DPPIV_N | 0.56 | 45.0 | 2.79e-01 | 91.8% | 32.6% |
| 189 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.56 | 48.0 | 3.62e-01 | 100.0% | 55.8% |
| 4098347 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 47.0 | 2.84e-01 | 100.0% | 14.2% |
| 3800913 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.55 | 46.0 | 3.91e-01 | 100.0% | 83.7% |
| 3732401 | 4161.1.1.0 ↗ | beta complex topology › MOSC N-terminal domain-like › MOSC N-terminal domain-like › MOSC N-terminal domain-like | 0.54 | 47.0 | 3.13e-01 | 100.0% | 39.4% |
| 4245054 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.54 | 46.0 | 3.32e-01 | 100.0% | 44.6% |
| 4033230 | 2008.1.1.155 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › CoiA_nuc | 0.54 | 43.0 | 3.56e-01 | 91.8% | 57.9% |
| 3926183 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.53 | 45.0 | 2.94e-01 | 93.2% | 33.4% |
| 4028871 | 2.1.1.10 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP | 0.53 | 42.0 | 4.26e-01 | 87.7% | 87.7% |
| 2665335 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.53 | 47.0 | 3.77e-01 | 100.0% | 67.6% |
| 4088247 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.53 | 42.0 | 2.65e-01 | 91.8% | 31.2% |
| 3305298 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.53 | 40.0 | 3.47e-01 | 83.6% | 71.7% |
| 4678692 | 5090.2.1.2 ↗ | beta complex topology › Viral glycoprotein, central and dimerisation domains-like › Immune inhibitor A metallopeptidase C-terminal domain › Immune inhibitor A metallopeptidase C-terminal domain › PF30934 | 0.53 | 47.0 | 3.35e-01 | 100.0% | 73.0% |
| 3588192 | 4325.1.1.7 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › Arm-DNA-bind_4 | 0.52 | 34.0 | 3.84e-01 | 91.8% | 100.0% |
| 3946740 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.52 | 41.0 | 3.89e-01 | 89.0% | 82.2% |
| 3587376 | 386.1.1.344 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Arm-DNA-bind_4 | 0.51 | 35.0 | 3.86e-01 | 93.2% | 96.4% |
| 3873021 | 5.1.5.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N | 0.51 | 40.0 | 2.54e-01 | 91.8% | 22.4% |
| 4006770 | 5.1.4.64 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › YNCE | 0.51 | 40.0 | 2.66e-01 | 90.4% | 39.4% |
| 3820214 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.51 | 44.0 | 3.20e-01 | 100.0% | 46.5% |
| 3399727 | 5.1.4.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH | 0.51 | 39.0 | 2.58e-01 | 89.0% | 39.7% |
| 3056308 | 5.1.2.3 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DPPIV_N | 0.50 | 41.0 | 3.59e-01 | 94.5% | 67.5% |
| 3588108 | 4325.1.1.7 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like › Arm-DNA-bind_4 | 0.50 | 33.0 | 3.74e-01 | 91.8% | 100.0% |
| 1731165 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.50 | 40.0 | 3.80e-01 | 89.0% | 82.0% |
| 3245395 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 42.0 | 2.74e-01 | 94.5% | 28.6% |
| None | — | 0.50 | 38.0 | 2.48e-01 | 87.7% | 30.9% |