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term1_saliva_scaffold_14_prodigal-single.1__X__X__00190
Bact-Virterm1_saliva_scaffold_14_prodigal-single.1__X__X__00190
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 19-81
Domain cluster:
rep: MF668280.1__ASZ74799.1__SEA_PHABBA_262__00224__D26-84
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3dt5A00 | 1.10.3940.10 | Mainly Alpha › Orthogonal Bundle › AF_0924 fold › AF_0924 domain | 0.68 | 52.0 | 4.27e-01 | 84.1% | 53.8% |
| 7uvpA02 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.64 | 42.0 | 4.15e-01 | 82.5% | 62.3% |
| 2dchX01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.64 | 50.0 | 4.39e-01 | 98.4% | 57.0% |
| 3vkgA02 | 1.20.140.100 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Dynein motor heavy chain, linker domain, N-terminal subdomain | 0.62 | 47.0 | 3.62e-01 | 81.0% | 78.2% |
| 3fpwA01 | 3.30.450.150 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain | 0.56 | 39.0 | 3.18e-01 | 74.6% | 83.2% |
| 3u21A00 | 1.10.10.2430 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NFRKB winged helix-like domain | 0.55 | 42.0 | 3.60e-01 | 85.7% | 85.3% |
| 2x6hA02 | 3.30.1010.10 | Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 4 | 0.53 | 44.0 | 3.38e-01 | 96.8% | 43.9% |
| 6k3lB02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 44.0 | 3.97e-01 | 96.8% | 70.3% |
| 1y0hB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 42.0 | 3.72e-01 | 93.7% | 67.3% |
| 2nraC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 43.0 | 3.43e-01 | 100.0% | 64.0% |
| 2e29A01 | 3.30.70.2280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.51 | 35.0 | 3.38e-01 | 85.7% | 60.5% |
| 3rgfA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 40.0 | 3.64e-01 | 95.2% | 66.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3379093 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.58 | 41.0 | 4.01e-01 | 84.1% | 67.1% |
| 4340473 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.58 | 39.0 | 3.63e-01 | 95.2% | 52.9% |
| 3751719 | 295.1.1.3 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA | 0.56 | 39.0 | 3.56e-01 | 76.2% | 97.8% |
| 3189837 | 129.1.1.0 ↗ | alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like | 0.53 | 43.0 | 3.09e-01 | 95.2% | 78.1% |
| 4028929 | 6127.1.1.1 ↗ | beta meanders › Beta meander domain in PfEMP1 protein › Beta meander domain in PfEMP1 protein › Beta meander domain in PfEMP1 protein › CIDR1_gamma | 0.53 | 35.0 | 3.13e-01 | 90.5% | 47.8% |
| 3734445 | 4955.1.1.2 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › DUF4387 | 0.52 | 43.0 | 3.71e-01 | 100.0% | 59.1% |
| 3437593 | 5061.1.1.2 ↗ | alpha complex topology › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › Preprotein translocase SecY subunit › SecY,Plug_translocon | 0.50 | 35.0 | 2.15e-01 | 74.6% | 40.9% |
| 3602384 | 304.39.1.1 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain › MS_channel_3rd | 0.50 | 36.0 | 3.11e-01 | 82.5% | 56.7% |