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term1_saliva_scaffold_14_prodigal-single.1__X__X__00208
Bact-Virterm1_saliva_scaffold_14_prodigal-single.1__X__X__00208
Identity
- Kingdom:
- phage
Quality
64.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-135
Domain cluster:
rep: term4_saliva_scaffold_1_prodigal-single.1__X__X__00250__D4-115
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5fgoA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 28.0 | 3.90e-01 | 84.0% | 90.3% |
| 2efiA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 34.0 | 3.79e-01 | 87.8% | 71.0% |
| 1n4kA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.58 | 40.0 | 3.94e-01 | 71.0% | 100.0% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.57 | 34.0 | 3.74e-01 | 84.0% | 71.6% |
| 2lt1A00 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.56 | 30.0 | 3.85e-01 | 93.9% | 92.0% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.55 | 26.0 | 3.71e-01 | 77.1% | 100.0% |
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 29.0 | 3.58e-01 | 79.4% | 89.5% |
| 3qkgA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.52 | 45.0 | 4.22e-01 | 96.9% | 86.0% |
| 4bf3A00 | 2.30.31.50 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Borrelia outer surface protein E/F | 0.51 | 40.0 | 3.99e-01 | 82.4% | 99.2% |
| 3hi2B00 | 3.30.2310.40 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › | 0.51 | 34.0 | 3.87e-01 | 91.6% | 93.8% |
| 1ul7A00 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.51 | 33.0 | 3.73e-01 | 79.4% | 85.3% |
| 7r97A02 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.50 | 25.0 | 3.33e-01 | 80.9% | 91.2% |
| 1jhnA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 43.0 | 3.58e-01 | 93.9% | 96.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4796553 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.59 | 19.0 | 2.81e-01 | 74.0% | 59.3% |
| 3773618 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.54 | 39.0 | 3.81e-01 | 74.0% | 70.0% |
| 4451493 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.53 | 47.0 | 4.33e-01 | 96.9% | 80.8% |
| 3875866 | 9.1.1.11 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 | 0.53 | 46.0 | 4.26e-01 | 96.9% | 80.0% |
| 3217097 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.52 | 37.0 | 3.70e-01 | 74.8% | 70.4% |
| 4015773 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.52 | 33.0 | 3.69e-01 | 97.7% | 82.0% |
| 3574976 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.52 | 23.0 | 3.41e-01 | 70.2% | 98.2% |
| 3755983 | 708.1.1.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain | 0.52 | 28.0 | 3.19e-01 | 78.6% | 69.5% |
| None | — | 0.52 | 45.0 | 4.19e-01 | 96.9% | 79.3% | |
| 5082808 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.51 | 36.0 | 2.20e-01 | 73.3% | 40.0% |
| 3722829 | 9.23.1.5 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › Lipocalin_5 | 0.51 | 43.0 | 4.06e-01 | 93.1% | 98.8% |
D2
high
residues 141-293