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term1_saliva_scaffold_14_prodigal-single.1__X__X__00262

Bact-Vir

term1_saliva_scaffold_14_prodigal-single.1__X__X__00262

Identity

Kingdom:
phage

Quality

69.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 216-340
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2qnlA00 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.58 48.0 4.47e-01 91.2% 96.3%
1blwC00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.52 35.0 3.44e-01 100.0% 62.4%
1x9zA01 3.30.1540.20 Alpha Beta › 2-Layer Sandwich › formyl-coa transferase, domain 3 › MutL, C-terminal domain, dimerisation subdomain 0.50 34.0 3.90e-01 83.2% 93.5%
D2 medium residues 2-56
PDB
D3 medium residues 64-95
PDB
D4 medium residues 136-189_410-506
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4tkoB01 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.55 28.0 3.52e-01 96.7% 80.4%
2rhiA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.52 31.0 3.56e-01 100.0% 78.6%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3702416 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 36.0 4.36e-01 87.4% 87.0%
4196537 4.1.1.52 ↗ beta barrels › SH3 › SH3 › SH3 › ZapC_C 0.61 30.0 4.39e-01 92.1% 100.0%
3890336 4.1.1.34 ↗ beta barrels › SH3 › SH3 › SH3 › MBT 0.56 35.0 2.87e-01 91.4% 34.2%
3765289 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 30.0 3.88e-01 100.0% 88.9%
3729666 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 30.0 3.47e-01 84.8% 79.1%
D5 medium residues 355-409
PDB