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term1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00062
Bact-Virterm1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00062
Identity
- Kingdom:
- phage
Quality
83.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 292-457
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1oaiA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.72 | 22.0 | 3.76e-01 | 73.5% | 78.0% |
| 1eptA00 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 16.0 | 3.05e-01 | 74.7% | 81.4% |
| 3fvcA01 | 2.30.30.1230 | Mainly Beta › Roll › SH3 type barrels. › | 0.52 | 21.0 | 2.97e-01 | 81.3% | 76.2% |
| 1zc1A02 | 3.10.330.10 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.52 | 19.0 | 2.60e-01 | 72.3% | 61.0% |
D2
medium
residues 1-91
Domain cluster:
rep: CAKLQF020000012.1__CAH1086445.1__SAMEA5780031_02396__00062__D1-91_177-204
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xffA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.82 | 74.0 | 5.30e-01 | 98.9% | 36.6% |
| 1ao0A01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.81 | 69.0 | 4.66e-01 | 98.9% | 27.3% |
| 6czfA01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.80 | 72.0 | 4.77e-01 | 98.9% | 27.1% |
| 4zfjD00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.78 | 72.0 | 5.23e-01 | 98.9% | 44.9% |
| 3mfiA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.73 | 59.0 | 5.43e-01 | 87.9% | 96.6% |
| 3q8pB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.71 | 57.0 | 5.45e-01 | 87.9% | 100.0% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.69 | 57.0 | 5.38e-01 | 91.2% | 92.8% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.68 | 54.0 | 5.28e-01 | 86.8% | 100.0% |
| 1y9qA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 41.0 | 4.15e-01 | 86.8% | 61.3% |
| 6v55A01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.65 | 48.0 | 4.49e-01 | 87.9% | 63.4% |
| 1te5A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.64 | 58.0 | 4.19e-01 | 98.9% | 36.4% |
| 3tiiA03 | 3.30.1490.20 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › ATP-grasp fold, A domain | 0.62 | 43.0 | 4.81e-01 | 90.1% | 100.0% |
| 2oa2A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.62 | 41.0 | 3.75e-01 | 86.8% | 51.2% |
| 3oqcA02 | 3.90.70.130 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.61 | 49.0 | 3.80e-01 | 89.0% | 47.6% |
| 1s4dE02 | 3.30.950.10 | Alpha Beta › 2-Layer Sandwich › Methyltransferase, Cobalt-precorrin-4 Transmethylase; Domain 2 › Tetrapyrrole methylase, C-terminal domain | 0.61 | 48.0 | 4.22e-01 | 97.8% | 56.1% |
| 1y3tA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 38.0 | 3.19e-01 | 86.8% | 35.6% |
| 3d82A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.60 | 37.0 | 3.64e-01 | 86.8% | 54.9% |
| 3klkA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.58 | 48.0 | 4.18e-01 | 91.2% | 72.0% |
| 2zbvC02 | 2.40.30.90 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like | 0.58 | 44.0 | 4.25e-01 | 80.2% | 93.1% |
| 1yb3A00 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.58 | 43.0 | 3.61e-01 | 89.0% | 44.2% |
| 1ulvA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 43.0 | 4.48e-01 | 98.9% | 86.0% |
| 1jelP00 | 3.30.1340.10 | Alpha Beta › 2-Layer Sandwich › Histidine-containing Protein; Chain: A; › HPr-like | 0.57 | 40.0 | 4.12e-01 | 86.8% | 78.8% |
| 3k94A00 | 3.40.50.10240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain | 0.56 | 39.0 | 3.01e-01 | 86.8% | 30.8% |
| 3ougA00 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.55 | 45.0 | 4.32e-01 | 89.0% | 83.0% |
| 1yhfA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 42.0 | 3.99e-01 | 87.9% | 69.1% |
| 3i3wA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.54 | 34.0 | 3.66e-01 | 87.9% | 74.0% |
| 1f35A00 | 2.60.120.390 | Mainly Beta › Sandwich › Jelly Rolls › Olfactory marker | 0.53 | 42.0 | 3.55e-01 | 87.9% | 61.7% |
| 3jb8A00 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 42.0 | 3.38e-01 | 86.8% | 94.6% |
| 2cs4A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 36.0 | 3.60e-01 | 71.4% | 87.4% |
| 2ep6A01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 41.0 | 3.81e-01 | 86.8% | 67.2% |
| 1m0wB05 | 3.30.1490.50 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Glutathione synthase lid domain | 0.52 | 34.0 | 3.85e-01 | 81.3% | 100.0% |
| 2kuiA02 | 3.30.10.20 | Alpha Beta › 2-Layer Sandwich › Trypsin Inhibitor V; Chain A › | 0.52 | 34.0 | 3.78e-01 | 97.8% | 88.2% |
| 7a1rA01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 41.0 | 3.79e-01 | 86.8% | 69.5% |
| 4icwA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 40.0 | 3.58e-01 | 84.6% | 66.2% |
| 1zhsA01 | 3.30.1490.230 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.51 | 30.0 | 3.50e-01 | 87.9% | 92.7% |
| 1rc6A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 44.0 | 3.32e-01 | 100.0% | 75.2% |
| 2a8eA00 | 3.30.930.20 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Protein of unknown function DUF1054 | 0.50 | 39.0 | 3.14e-01 | 89.0% | 39.5% |
ECOD (75)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004099 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.89 | 68.0 | 4.98e-01 | 100.0% | 33.5% |
| 5014594 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.87 | 67.0 | 5.01e-01 | 100.0% | 35.2% |
| 4991572 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.86 | 82.0 | 5.80e-01 | 100.0% | 42.1% |
| 4680317 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.86 | 77.0 | 5.53e-01 | 100.0% | 36.6% |
| 4940798 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.86 | 79.0 | 5.61e-01 | 100.0% | 36.3% |
| None | — | 0.85 | 76.0 | 5.46e-01 | 100.0% | 36.6% | |
| None | — | 0.85 | 77.0 | 5.51e-01 | 100.0% | 36.7% | |
| 4947599 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.84 | 78.0 | 5.56e-01 | 100.0% | 36.7% |
| 4321843 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.84 | 80.0 | 5.77e-01 | 100.0% | 41.3% |
| 4999227 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.84 | 79.0 | 5.55e-01 | 100.0% | 42.0% |
| 4259223 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.84 | 77.0 | 5.51e-01 | 100.0% | 37.4% |
| 3532427 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.84 | 79.0 | 5.51e-01 | 100.0% | 37.3% |
| 3577884 | 210.1.3.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_2 | 0.84 | 79.0 | 5.62e-01 | 100.0% | 47.9% |
| 3963821 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.84 | 77.0 | 5.41e-01 | 100.0% | 35.2% |
| 4149445 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.84 | 76.0 | 5.38e-01 | 100.0% | 35.5% |
| None | — | 0.84 | 76.0 | 5.40e-01 | 100.0% | 36.3% | |
| 4976025 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.84 | 77.0 | 5.47e-01 | 100.0% | 36.3% |
| 5010284 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.84 | 74.0 | 5.45e-01 | 100.0% | 39.5% |
| 4484517 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.84 | 76.0 | 5.37e-01 | 100.0% | 35.2% |
| 4954583 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.84 | 78.0 | 5.55e-01 | 98.9% | 37.5% |
| None | — | 0.84 | 76.0 | 5.46e-01 | 100.0% | 37.4% | |
| 5024221 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.83 | 60.0 | 4.59e-01 | 100.0% | 35.8% |
| 4960069 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.83 | 76.0 | 5.52e-01 | 100.0% | 38.7% |
| 3973007 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.83 | 74.0 | 5.25e-01 | 100.0% | 34.8% |
| 3972522 | 210.1.3.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_2 | 0.83 | 75.0 | 5.04e-01 | 97.8% | 36.2% |
| 5071630 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.82 | 76.0 | 5.46e-01 | 100.0% | 37.5% |
| None | — | 0.82 | 77.0 | 5.38e-01 | 100.0% | 36.9% | |
| 3741900 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.82 | 76.0 | 5.35e-01 | 100.0% | 35.0% |
| 3965213 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.81 | 76.0 | 5.24e-01 | 100.0% | 33.8% |
| 5052100 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.81 | 76.0 | 5.38e-01 | 100.0% | 37.6% |
| 3685838 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.81 | 76.0 | 5.01e-01 | 100.0% | 32.7% |
| 3782814 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.81 | 75.0 | 5.13e-01 | 100.0% | 35.7% |
| 4588679 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.81 | 76.0 | 5.39e-01 | 100.0% | 38.8% |
| 4012892 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.81 | 75.0 | 4.95e-01 | 100.0% | 33.8% |
| 5054721 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.80 | 73.0 | 5.25e-01 | 100.0% | 37.1% |
| 5027645 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.80 | 75.0 | 5.25e-01 | 100.0% | 40.8% |
| 5001463 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.80 | 74.0 | 5.06e-01 | 100.0% | 34.2% |
| 4541620 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.80 | 75.0 | 5.27e-01 | 100.0% | 36.9% |
| 3942872 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.80 | 74.0 | 5.25e-01 | 100.0% | 36.5% |
| 5066749 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.80 | 75.0 | 5.32e-01 | 100.0% | 39.2% |
| 5032499 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.80 | 75.0 | 5.31e-01 | 100.0% | 38.8% |
| 3273426 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.79 | 74.0 | 5.14e-01 | 100.0% | 38.4% |
| 5038401 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.79 | 74.0 | 5.05e-01 | 100.0% | 36.5% |
| 4976794 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.79 | 72.0 | 5.22e-01 | 100.0% | 38.7% |
| 5027271 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.79 | 73.0 | 5.15e-01 | 98.9% | 38.8% |
| 5081419 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.78 | 72.0 | 5.06e-01 | 100.0% | 39.3% |
| 3690304 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.78 | 73.0 | 5.02e-01 | 100.0% | 36.0% |
| 4981026 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.78 | 69.0 | 5.00e-01 | 100.0% | 36.3% |
| 5011866 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.78 | 72.0 | 5.20e-01 | 100.0% | 43.8% |
| 4991735 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.78 | 71.0 | 5.16e-01 | 100.0% | 38.7% |
| 5046400 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.76 | 69.0 | 4.86e-01 | 100.0% | 33.6% |
| 5012635 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.76 | 69.0 | 4.90e-01 | 100.0% | 39.2% |
| 4333681 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.74 | 62.0 | 5.63e-01 | 90.1% | 90.0% |
| 4944470 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.73 | 67.0 | 4.85e-01 | 100.0% | 43.3% |
| 4150009 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.73 | 59.0 | 5.15e-01 | 87.9% | 73.6% |
| 5075402 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.73 | 67.0 | 4.63e-01 | 100.0% | 31.9% |
| 4568546 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.72 | 58.0 | 5.30e-01 | 87.9% | 84.9% |
| 4085698 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.70 | 57.0 | 5.19e-01 | 87.9% | 83.2% |
| 4939155 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.70 | 56.0 | 5.14e-01 | 87.9% | 85.7% |
| 4928834 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.70 | 63.0 | 4.74e-01 | 100.0% | 41.8% |
| 4647537 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.69 | 56.0 | 5.26e-01 | 87.9% | 89.1% |
| 2006900 | 302.4.1.0 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit | 0.65 | 53.0 | 5.15e-01 | 91.2% | 99.0% |
| 3903463 | 10.32.1.163 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Laminin_N | 0.64 | 51.0 | 3.87e-01 | 86.8% | 55.9% |
| 4327532 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.63 | 51.0 | 4.67e-01 | 95.6% | 66.7% |
| 3349294 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.61 | 48.0 | 4.19e-01 | 85.7% | 94.3% |
| 5043133 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.57 | 46.0 | 4.34e-01 | 87.9% | 100.0% |
| 4099186 | 219.1.1.21 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C58 | 0.56 | 45.0 | 3.60e-01 | 87.9% | 52.6% |
| 2323861 | 1137.1.1.0 ↗ | a+b two layers › Tetrapyrrole methylase C-terminal domain-like › Tetrapyrrole methylase C-terminal domain › Tetrapyrrole methylase C-terminal domain | 0.56 | 48.0 | 4.03e-01 | 97.8% | 75.2% |
| 5072894 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.56 | 45.0 | 3.16e-01 | 87.9% | 39.7% |
| 3484793 | 4111.1.1.3 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › DUF1907 | 0.55 | 48.0 | 3.36e-01 | 98.9% | 74.4% |
| 3486390 | 4111.1.1.0 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like | 0.55 | 47.0 | 3.40e-01 | 100.0% | 63.7% |
| 3481116 | 4111.1.1.0 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like | 0.55 | 43.0 | 3.45e-01 | 87.9% | 68.7% |
| 4930010 | 1.1.7.141 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MazE_antitoxin | 0.50 | 41.0 | 4.13e-01 | 92.3% | 88.4% |
| 3992718 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 39.0 | 4.01e-01 | 84.6% | 95.3% |
| 3626313 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.50 | 39.0 | 4.08e-01 | 89.0% | 91.8% |
D3
medium
residues 92-250
Domain cluster:
rep: asparagine_synthetase__YP_007674871__Ostreococcus_lucimarinus_virus_OlV5__754064__D6-145
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13537.12 best | GATase_7 | 34.6 | 2.50e-08 | 74.2% | 81.3% |
| PF13522.12 | GATase_6 | 34.7 | 2.30e-08 | 70.4% | 53.1% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ct9A01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.85 | 67.0 | 6.27e-01 | 96.9% | 68.2% |
| 1jgtB01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.79 | 71.0 | 6.41e-01 | 96.9% | 72.2% |
| 7ylzA01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.78 | 70.0 | 6.19e-01 | 94.3% | 72.5% |
| 3mdnD00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.72 | 66.0 | 5.78e-01 | 96.2% | 70.9% |
| 1q15A01 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.71 | 64.0 | 5.85e-01 | 96.9% | 79.0% |
| 3w42A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.57 | 40.0 | 3.76e-01 | 88.7% | 58.3% |
| 2i44B00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.54 | 40.0 | 3.21e-01 | 76.7% | 74.7% |
| 3pu9A00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.53 | 41.0 | 3.57e-01 | 89.9% | 54.0% |
| 1iruI00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.52 | 38.0 | 3.39e-01 | 74.8% | 60.0% |
| 6qm7N00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.52 | 38.0 | 3.43e-01 | 76.1% | 63.3% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3392899 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.87 | 69.0 | 6.28e-01 | 94.3% | 63.9% |
| 4000151 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.85 | 68.0 | 6.26e-01 | 97.5% | 66.5% |
| 4024179 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.82 | 68.0 | 6.11e-01 | 97.5% | 65.2% |
| None | — | 0.81 | 67.0 | 6.13e-01 | 95.0% | 68.0% | |
| 5016339 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.80 | 70.0 | 6.04e-01 | 95.6% | 62.6% |
| None | — | 0.80 | 68.0 | 5.84e-01 | 95.0% | 59.6% | |
| 4149445 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.80 | 67.0 | 5.71e-01 | 95.6% | 56.7% |
| 4928832 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.80 | 71.0 | 6.19e-01 | 96.9% | 65.3% |
| 3951046 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.80 | 73.0 | 5.96e-01 | 95.0% | 63.4% |
| 4999227 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.80 | 70.0 | 5.89e-01 | 100.0% | 57.6% |
| 3960590 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.79 | 74.0 | 6.74e-01 | 97.5% | 85.5% |
| 3604150 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.79 | 74.0 | 6.11e-01 | 97.5% | 68.1% |
| 3263898 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.79 | 73.0 | 6.18e-01 | 96.9% | 69.7% |
| 7838 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.79 | 69.0 | 6.30e-01 | 96.9% | 72.5% |
| 5051945 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.79 | 72.0 | 6.40e-01 | 95.6% | 74.4% |
| 5074315 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.79 | 70.0 | 5.10e-01 | 93.7% | 90.2% |
| 4928834 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.79 | 64.0 | 5.68e-01 | 95.6% | 61.4% |
| 4140246 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.78 | 72.0 | 6.09e-01 | 96.9% | 65.7% |
| 3287103 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.78 | 72.0 | 6.22e-01 | 96.9% | 70.0% |
| 5055717 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.78 | 72.0 | 6.20e-01 | 97.5% | 69.8% |
| 3284789 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.77 | 72.0 | 6.29e-01 | 97.5% | 72.4% |
| 4224238 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.77 | 71.0 | 6.17e-01 | 96.9% | 72.2% |
| 4974457 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.77 | 70.0 | 6.18e-01 | 95.6% | 71.8% |
| 4991740 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.76 | 68.0 | 5.68e-01 | 93.7% | 84.6% |
| 4646896 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.75 | 69.0 | 5.71e-01 | 96.9% | 59.2% |
| 4484517 | 210.1.3.5 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_7 | 0.74 | 69.0 | 5.86e-01 | 98.7% | 63.2% |
| 5054721 | 210.1.3.3 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_4 | 0.72 | 64.0 | 5.51e-01 | 95.6% | 62.1% |
| 3483778 | 210.1.3.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases | 0.70 | 64.0 | 5.37e-01 | 98.1% | 70.4% |
| 141810 | 210.2.1.2 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE | 0.53 | 41.0 | 3.57e-01 | 89.9% | 53.8% |
| 3098606 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.52 | 37.0 | 3.34e-01 | 74.2% | 63.2% |
| 4547628 | 210.2.1.2 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › SpoIIE | 0.51 | 39.0 | 3.52e-01 | 89.9% | 56.9% |
| 4945506 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.51 | 37.0 | 3.41e-01 | 74.8% | 64.3% |
| 3513468 | 210.1.1.1 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits › Proteasome | 0.51 | 38.0 | 3.45e-01 | 76.7% | 71.2% |
| 3594178 | 210.1.1.0 ↗ | a+b four layers › Ntn/PP2C › Ntn › Proteasome subunits | 0.51 | 38.0 | 3.42e-01 | 76.1% | 64.2% |
| 3270083 | 210.2.1.0 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain | 0.51 | 40.0 | 3.48e-01 | 88.7% | 54.6% |
| 3307642 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.50 | 42.0 | 4.07e-01 | 89.9% | 81.7% |