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term1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00066
Bact-Virterm1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00066
Identity
- Kingdom:
- phage
Quality
67.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-107
Domain cluster:
representative
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5xweA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.57 | 27.0 | 3.50e-01 | 95.2% | 86.3% |
| 1hkyA00 | 3.50.4.10 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Hepatocyte Growth Factor | 0.55 | 32.0 | 3.52e-01 | 98.1% | 69.8% |
| 2hlrA00 | 2.10.60.10 | Mainly Beta › Ribbon › CD59 › CD59 | 0.55 | 28.0 | 3.35e-01 | 99.0% | 73.1% |
| 1yuzA02 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.53 | 21.0 | 3.39e-01 | 82.7% | 100.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3240208 | 382.1.1.3 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like › Activin_recp | 0.57 | 32.0 | 3.47e-01 | 74.0% | 64.0% |
| 3240806 | 390.1.1.0 ↗ | few secondary structure elements › Hairpin loop containing domain-like › Hairpin loop containing domain-like › Hairpin loop containing domain-like | 0.52 | 31.0 | 3.48e-01 | 98.1% | 80.0% |
| 4949173 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.50 | 32.0 | 3.32e-01 | 85.6% | 66.7% |
| 3618239 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.50 | 36.0 | 3.45e-01 | 100.0% | 64.2% |
| 4124687 | 304.162.1.1 ↗ | a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH | 0.50 | 34.0 | 3.85e-01 | 86.5% | 96.0% |
D2
high
residues 136-300
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l5qA01 | 2.30.30.730 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 23.0 | 4.24e-01 | 80.0% | 100.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 29.0 | 4.30e-01 | 71.5% | 89.0% |
| 1x6bA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 24.0 | 3.89e-01 | 75.2% | 100.0% |
| 3jtzA00 | 3.30.160.390 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain | 0.58 | 23.0 | 3.22e-01 | 95.8% | 72.7% |
| 4oonA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 26.0 | 3.25e-01 | 98.8% | 68.3% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.54 | 22.0 | 3.39e-01 | 84.8% | 92.4% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.54 | 26.0 | 3.70e-01 | 79.4% | 97.4% |
| 2a5hA03 | 6.20.120.40 | Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 20.0 | 3.20e-01 | 85.5% | 93.5% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3577864 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.65 | 28.0 | 3.81e-01 | 77.0% | 76.5% |
| 3574613 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.64 | 30.0 | 3.79e-01 | 84.2% | 72.0% |
| 3495480 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.60 | 23.0 | 3.86e-01 | 84.8% | 100.0% |