←Back to structures
term1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00074
Bact-Virterm1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00074
Identity
- Kingdom:
- phage
Quality
89.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 14-122
Domain cluster:
representative
D2
medium
residues 123-201
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vszB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 40.0 | 3.56e-01 | 84.8% | 53.0% |
| 4k2xA03 | 3.40.30.120 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.53 | 44.0 | 3.92e-01 | 89.9% | 70.5% |
| 3u1kC01 | 3.30.230.70 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › GHMP Kinase, N-terminal domain | 0.53 | 37.0 | 2.76e-01 | 74.7% | 84.1% |
| 1xc3A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 34.0 | 3.15e-01 | 84.8% | 48.5% |
| 1maiA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 37.0 | 3.34e-01 | 84.8% | 49.6% |
| 2l5oA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 43.0 | 3.52e-01 | 89.9% | 82.7% |
| 4n30A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 41.0 | 3.26e-01 | 89.9% | 94.0% |
| 4bwiB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.52 | 40.0 | 3.14e-01 | 84.8% | 54.1% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.52 | 34.0 | 3.12e-01 | 89.9% | 47.4% |
| 3mcpA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 35.0 | 3.23e-01 | 94.9% | 50.9% |
| 3zq5A03 | 3.30.450.270 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain | 0.52 | 37.0 | 3.13e-01 | 88.6% | 41.2% |
| 4f9zA02 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.51 | 44.0 | 3.95e-01 | 98.7% | 99.1% |
| 1z87A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.51 | 37.0 | 3.43e-01 | 77.2% | 91.0% |
| 3hdcA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 40.0 | 3.51e-01 | 89.9% | 92.2% |
| 6guuA01 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.50 | 29.0 | 3.37e-01 | 83.5% | 83.3% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3953675 | 330.7.1.0 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain | 0.65 | 43.0 | 4.58e-01 | 100.0% | 81.5% |
| 3430159 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.58 | 41.0 | 4.38e-01 | 91.1% | 88.2% |
| 5053714 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.58 | 40.0 | 3.44e-01 | 73.4% | 91.1% |
| 5074629 | 304.6.1.1 ↗ | a+b two layers › Alpha-beta plaits › FAD-linked oxidases, C-terminal domain › FAD-linked oxidases, C-terminal domain › FAD-oxidase_C | 0.56 | 40.0 | 2.90e-01 | 75.9% | 63.3% |
| 3284940 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.56 | 48.0 | 2.86e-01 | 100.0% | 32.8% |
| 3504015 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.56 | 37.0 | 3.62e-01 | 84.8% | 62.4% |
| 4486447 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.55 | 44.0 | 2.75e-01 | 88.6% | 15.9% |
| 3298656 | 223.1.1.105 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › DUF7050 | 0.54 | 40.0 | 3.29e-01 | 84.8% | 42.0% |
| 3446884 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 34.0 | 3.54e-01 | 84.8% | 70.0% |
| 4071071 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.53 | 38.0 | 3.16e-01 | 97.5% | 40.0% |
| 4966262 | 330.7.1.2 ↗ | a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin | 0.53 | 33.0 | 3.59e-01 | 96.2% | 78.5% |
| 4261729 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.52 | 41.0 | 3.17e-01 | 87.3% | 69.5% |
| 3997533 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.52 | 34.0 | 3.05e-01 | 83.5% | 45.2% |
| 5074382 | 2485.1.1.15 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredox_DsbH | 0.51 | 41.0 | 3.44e-01 | 91.1% | 79.3% |
| 4973213 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.51 | 41.0 | 3.06e-01 | 91.1% | 60.9% |
| 3340809 | 2485.1.1.1 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin | 0.50 | 43.0 | 3.78e-01 | 100.0% | 88.0% |