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term1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00132
Bact-Virterm1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00132
Identity
- Kingdom:
- phage
Quality
93.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-144
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wiiA01 | 2.20.25.190 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.65 | 23.0 | 3.46e-01 | 78.3% | 72.6% |
| 2yyzA02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.65 | 26.0 | 3.92e-01 | 80.4% | 89.7% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.64 | 48.0 | 5.28e-01 | 93.7% | 98.2% |
| 1ynjJ02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 30.0 | 4.28e-01 | 84.6% | 100.0% |
| 5wceA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.64 | 50.0 | 5.29e-01 | 96.5% | 92.2% |
| 2z0lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.60 | 52.0 | 4.09e-01 | 97.2% | 44.6% |
| 3hslX00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.60 | 53.0 | 4.17e-01 | 95.1% | 46.7% |
| 2dmoA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 23.0 | 3.17e-01 | 92.3% | 73.5% |
| 4uoiC00 | 3.30.160.890 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C | 0.54 | 20.0 | 3.18e-01 | 75.5% | 90.2% |
| 4rfbA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 29.0 | 3.84e-01 | 86.0% | 100.0% |
| 1ov3A02 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 20.0 | 3.06e-01 | 84.6% | 87.3% |
| 4da2A01 | 2.40.50.580 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.52 | 27.0 | 3.45e-01 | 80.4% | 87.3% |
| 3ms6A00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.52 | 23.0 | 2.77e-01 | 90.2% | 58.9% |
| 2fn0B00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.52 | 39.0 | 2.86e-01 | 78.3% | 98.1% |
| 4cbvA02 | 2.40.50.1020 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain | 0.51 | 31.0 | 3.39e-01 | 97.9% | 72.0% |
| 3nrlA00 | 2.40.10.390 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 25.0 | 3.36e-01 | 83.9% | 94.1% |
| 3aqqA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.50 | 31.0 | 3.60e-01 | 93.0% | 87.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4983767 | 218.4.1.0 ↗ | a+b two layers › Enolase-N/ribosomal protein › Dhaf4260 N-terminal domain › Dhaf4260 N-terminal domain | 0.62 | 33.0 | 4.08e-01 | 87.4% | 82.2% |
| 4063004 | 2.1.1.84 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_N | 0.57 | 30.0 | 3.09e-01 | 90.9% | 50.0% |
| 4974179 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.57 | 28.0 | 3.18e-01 | 95.1% | 58.2% |
| 4062087 | 1023.1.1.1 ↗ | beta barrels › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › ZapC_N | 0.57 | 33.0 | 4.15e-01 | 74.8% | 96.5% |
| 3970643 | 9002.1.1.0 ↗ | a/b three-layered sandwiches › ATP-grasp_6 › ATP-grasp_6 › ATP-grasp_6 | 0.57 | 21.0 | 3.18e-01 | 83.2% | 84.0% |
| 4318285 | 1023.1.1.1 ↗ | beta barrels › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › ZapC_N | 0.55 | 32.0 | 4.11e-01 | 76.2% | 98.8% |
| 3493400 | 220.1.1.22 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C | 0.52 | 29.0 | 3.34e-01 | 89.5% | 73.3% |
| 5071331 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 28.0 | 3.48e-01 | 88.8% | 89.4% |