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term1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00182
Bact-Virterm1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00182
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-220
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4qakA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.76 | 58.0 | 6.41e-01 | 91.1% | 97.7% |
| 1jh6A00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.74 | 58.0 | 6.34e-01 | 91.1% | 95.6% |
| 1vdxA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.72 | 59.0 | 6.29e-01 | 91.1% | 98.4% |
| 4h7wA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.72 | 60.0 | 6.35e-01 | 91.1% | 98.9% |
| 2vfkA00 | 3.90.1140.10 | Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase | 0.68 | 59.0 | 6.06e-01 | 91.6% | 97.6% |
| 2yeqA01 | 2.60.40.380 | Mainly Beta › Sandwich › Immunoglobulin-like › Purple acid phosphatase-like, N-terminal | 0.62 | 20.0 | 2.83e-01 | 90.7% | 56.0% |
| 3l4jA04 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.59 | 19.0 | 2.70e-01 | 76.6% | 55.9% |
| 2dt9A01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.58 | 17.0 | 2.83e-01 | 85.5% | 68.9% |
| 4g1gA02 | 2.70.20.60 | Mainly Beta › Distorted Sandwich › Topoisomerase I; domain 3 › Viral matrix protein, C-terminal domain | 0.56 | 39.0 | 4.37e-01 | 91.6% | 89.3% |
| 1q8bA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 21.0 | 3.04e-01 | 77.1% | 81.7% |
| 3kulA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 19.0 | 2.79e-01 | 87.4% | 74.2% |
| 2apoA03 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 22.0 | 3.25e-01 | 76.6% | 92.4% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5028063 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.75 | 59.0 | 6.46e-01 | 90.7% | 97.7% |
| 3982264 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.75 | 58.0 | 6.35e-01 | 91.1% | 97.1% |
| 3690734 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.75 | 56.0 | 6.34e-01 | 90.2% | 99.4% |
| 3397353 | 264.1.1.6 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › HVSL | 0.74 | 60.0 | 6.49e-01 | 90.7% | 98.4% |
| 4994515 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.73 | 59.0 | 6.36e-01 | 90.7% | 98.9% |
| None | — | 0.73 | 58.0 | 6.30e-01 | 90.7% | 100.0% | |
| 3531648 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.73 | 59.0 | 6.41e-01 | 90.7% | 100.0% |
| 4453123 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.72 | 58.0 | 6.25e-01 | 90.2% | 98.3% |
| 5061864 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.72 | 57.0 | 6.14e-01 | 89.3% | 95.1% |
| 5067404 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.72 | 58.0 | 6.23e-01 | 91.1% | 97.3% |
| 5000045 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.72 | 59.0 | 6.27e-01 | 91.1% | 97.8% |
| None | — | 0.72 | 59.0 | 6.29e-01 | 91.1% | 98.4% | |
| 2322578 | 264.1.1.6 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › HVSL | 0.72 | 59.0 | 6.30e-01 | 91.1% | 98.4% |
| 4942504 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.72 | 59.0 | 6.32e-01 | 91.1% | 99.5% |
| 5036038 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.71 | 58.0 | 6.27e-01 | 90.2% | 100.0% |
| None | — | 0.71 | 58.0 | 6.23e-01 | 91.1% | 99.4% | |
| 5030633 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.71 | 59.0 | 6.23e-01 | 91.1% | 97.3% |
| 4956981 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.71 | 58.0 | 6.23e-01 | 91.1% | 98.4% |
| 4948034 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.71 | 58.0 | 6.17e-01 | 91.1% | 97.3% |
| 5051264 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.71 | 56.0 | 6.10e-01 | 90.7% | 98.3% |
| 4957217 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.71 | 57.0 | 6.20e-01 | 91.1% | 98.9% |
| 5055911 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.71 | 57.0 | 6.15e-01 | 91.1% | 98.9% |
| 4946449 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.71 | 58.0 | 6.25e-01 | 91.1% | 98.9% |
| 3479830 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.71 | 60.0 | 6.30e-01 | 91.1% | 95.9% |
| 4930187 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.71 | 59.0 | 6.23e-01 | 91.1% | 97.9% |
| 3937447 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.71 | 62.0 | 6.30e-01 | 91.1% | 96.6% |
| 5026546 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.71 | 57.0 | 6.16e-01 | 90.7% | 99.4% |
| 5010662 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.71 | 57.0 | 6.13e-01 | 91.1% | 97.8% |
| 4982807 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.71 | 58.0 | 6.20e-01 | 91.1% | 98.9% |
| 5029239 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.70 | 56.0 | 6.09e-01 | 91.1% | 98.9% |
| 3233020 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.70 | 59.0 | 6.26e-01 | 91.1% | 98.9% |
| 3553577 | 264.1.1.0 ↗ | beta barrels › LigT-like › LigT-related › LigT-related | 0.70 | 55.0 | 6.02e-01 | 91.6% | 98.9% |
| 5058094 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.70 | 55.0 | 6.08e-01 | 91.1% | 100.0% |
| 3253597 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.70 | 60.0 | 6.32e-01 | 90.7% | 99.0% |
| 5047137 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.70 | 57.0 | 6.10e-01 | 91.1% | 98.4% |
| 4979619 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.70 | 53.0 | 5.89e-01 | 86.9% | 98.8% |
| 1869530 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.70 | 61.0 | 6.16e-01 | 91.1% | 94.3% |
| None | — | 0.70 | 53.0 | 5.90e-01 | 86.9% | 99.4% | |
| 4949121 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.70 | 56.0 | 6.03e-01 | 91.1% | 99.4% |
| 3674751 | 264.1.1.6 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › HVSL | 0.69 | 61.0 | 6.06e-01 | 92.1% | 100.0% |
| 3730050 | 264.1.1.5 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2H-phosphodiest | 0.69 | 60.0 | 5.94e-01 | 91.6% | 92.1% |
| 3205096 | 264.1.1.9 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 | 0.69 | 57.0 | 6.08e-01 | 91.1% | 98.9% |
| 3916803 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.69 | 60.0 | 5.89e-01 | 91.1% | 95.6% |
| 4972958 | 264.1.1.1 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase | 0.69 | 56.0 | 6.04e-01 | 91.1% | 98.9% |
| 1117634 | 264.1.1.8 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS,AKAP7_RIRII_bdg | 0.69 | 60.0 | 5.92e-01 | 91.6% | 87.0% |
| 4932664 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.69 | 56.0 | 6.02e-01 | 91.1% | 98.4% |
| 3735878 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.69 | 59.0 | 6.19e-01 | 91.1% | 98.5% |
| 4026533 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.69 | 59.0 | 6.14e-01 | 91.1% | 97.5% |
| 3731250 | 264.1.1.6 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › HVSL | 0.67 | 58.0 | 6.05e-01 | 91.1% | 97.5% |
| 3739681 | 264.1.1.6 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › HVSL | 0.67 | 58.0 | 6.05e-01 | 91.1% | 99.0% |
| 3464521 | 264.1.1.7 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS | 0.67 | 58.0 | 5.78e-01 | 92.1% | 98.2% |
| 4025967 | 264.1.1.6 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › HVSL | 0.66 | 57.0 | 5.44e-01 | 91.6% | 99.2% |
| 3270425 | 264.1.1.6 ↗ | beta barrels › LigT-like › LigT-related › LigT-related › HVSL | 0.64 | 55.0 | 5.78e-01 | 91.1% | 99.5% |
| 5080958 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.56 | 17.0 | 2.78e-01 | 87.4% | 70.7% |
| 3171938 | 896.1.1.2 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP14 | 0.50 | 28.0 | 3.65e-01 | 96.3% | 98.2% |