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term1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00301
Bact-Virterm1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00301
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-46_70-101_150-193
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jwqA00 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.89 | 86.0 | 7.34e-01 | 100.0% | 100.0% |
| 4rn7A00 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.89 | 84.0 | 7.12e-01 | 99.2% | 97.8% |
| 8c2oB01 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.88 | 83.0 | 6.54e-01 | 97.5% | 99.1% |
| 4lq6A00 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.87 | 83.0 | 6.68e-01 | 99.2% | 99.1% |
| 8c0jA01 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.87 | 83.0 | 6.84e-01 | 98.4% | 99.5% |
| 3ne8A00 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.86 | 82.0 | 6.44e-01 | 99.2% | 96.0% |
| 1xovA01 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.79 | 75.0 | 6.49e-01 | 100.0% | 99.4% |
| 1h19A02 | 3.30.2010.30 | Alpha Beta › 2-Layer Sandwich › Zincin-like › | 0.65 | 46.0 | 5.05e-01 | 93.4% | 91.8% |
| 1yqeA01 | 3.40.630.50 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › AF0625-like | 0.62 | 57.0 | 4.90e-01 | 99.2% | 98.4% |
| 2bcoA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.59 | 55.0 | 4.17e-01 | 100.0% | 72.2% |
| 4f1jA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.57 | 52.0 | 4.40e-01 | 99.2% | 97.5% |
| 1hp1A01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.56 | 43.0 | 3.19e-01 | 82.0% | 91.5% |
| 3bjeA01 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.56 | 50.0 | 3.71e-01 | 98.4% | 98.4% |
| 7br2D01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.56 | 48.0 | 4.01e-01 | 94.3% | 95.4% |
| 3e4cB00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 49.0 | 3.88e-01 | 100.0% | 89.2% |
| 3fnrA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 46.0 | 3.41e-01 | 88.5% | 94.1% |
| 1pg2A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 46.0 | 3.36e-01 | 91.0% | 88.1% |
| 4nk4F00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 48.0 | 3.79e-01 | 97.5% | 90.3% |
| 5ig2A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 48.0 | 3.67e-01 | 96.7% | 88.5% |
| 4g0mA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 48.0 | 4.65e-01 | 97.5% | 99.3% |
| 5q22A02 | 3.40.50.12650 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 38.0 | 3.61e-01 | 75.4% | 85.1% |
| 1ukcB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 47.0 | 3.13e-01 | 100.0% | 72.7% |
| 1pyoC00 | 3.40.50.1460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 38.0 | 3.52e-01 | 77.0% | 80.7% |
| 6m5nA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 46.0 | 3.62e-01 | 97.5% | 91.9% |
| 3lm2A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 25.0 | 2.81e-01 | 91.8% | 53.6% |
| 3m1aJ00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.52 | 46.0 | 3.57e-01 | 97.5% | 86.1% |
| 4eziA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 45.0 | 3.54e-01 | 99.2% | 74.7% |
| 1rzuB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 45.0 | 3.52e-01 | 97.5% | 99.6% |
| 2xkbL00 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.51 | 46.0 | 3.26e-01 | 100.0% | 57.8% |
| 3u49D00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 45.0 | 3.65e-01 | 98.4% | 93.4% |
| 4dyvA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 46.0 | 3.83e-01 | 98.4% | 94.4% |
| 1kqpA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.51 | 39.0 | 3.06e-01 | 82.8% | 59.0% |
| 3m1rB01 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.50 | 44.0 | 3.37e-01 | 97.5% | 99.7% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3587576 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.89 | 84.0 | 7.19e-01 | 98.4% | 98.9% |
| 1406254 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.89 | 84.0 | 7.13e-01 | 99.2% | 97.8% |
| 4257112 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.89 | 84.0 | 7.19e-01 | 98.4% | 98.9% |
| 4005299 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.88 | 84.0 | 6.29e-01 | 99.2% | 84.2% |
| 3947578 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.88 | 84.0 | 6.46e-01 | 99.2% | 95.0% |
| 2772634 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.88 | 83.0 | 6.88e-01 | 99.2% | 99.5% |
| 5062843 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.87 | 84.0 | 6.46e-01 | 100.0% | 96.2% |
| 3954478 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.87 | 83.0 | 6.59e-01 | 99.2% | 95.9% |
| 4378040 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.87 | 80.0 | 6.26e-01 | 95.9% | 96.1% |
| 5029849 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.87 | 83.0 | 6.63e-01 | 99.2% | 97.7% |
| 1736724 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.87 | 82.0 | 7.06e-01 | 99.2% | 98.3% |
| 4180517 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.87 | 82.0 | 7.02e-01 | 98.4% | 98.3% |
| 3962927 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.87 | 83.0 | 6.68e-01 | 99.2% | 100.0% |
| 3288160 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.86 | 83.0 | 6.34e-01 | 100.0% | 97.6% |
| 2889942 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.86 | 82.0 | 7.07e-01 | 99.2% | 98.3% |
| 4230376 | 2011.1.1.5 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Amidase_3 | 0.86 | 83.0 | 7.06e-01 | 100.0% | 98.9% |
| 5065240 | 7539.1.1.1 ↗ | a/b three-layered sandwiches › Creatininase › Creatininase › Creatininase › Creatininase | 0.65 | 60.0 | 4.75e-01 | 99.2% | 92.1% |
| 4991539 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.61 | 54.0 | 4.26e-01 | 95.9% | 86.4% |
| 5071116 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.60 | 53.0 | 4.22e-01 | 95.9% | 78.3% |
| 3273259 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.60 | 53.0 | 4.28e-01 | 100.0% | 94.7% |
| 3604777 | 2011.2.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PNP_UDP_1 | 0.59 | 52.0 | 3.77e-01 | 95.1% | 91.3% |
| 3635988 | 7590.1.1.7 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › MID_MedPIWI | 0.58 | 53.0 | 4.31e-01 | 100.0% | 78.7% |
| 4969295 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.55 | 48.0 | 4.20e-01 | 98.4% | 99.5% |
| 3232093 | 2003.1.1.141 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Polysacc_synt_2, GDP_Man_Dehyd | 0.53 | 47.0 | 2.97e-01 | 96.7% | 38.2% |
| 3638813 | 7512.1.1.101 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_5, Glyco_trans_1_4 | 0.53 | 47.0 | 3.10e-01 | 98.4% | 29.6% |
| 3742745 | 7512.1.1.137 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1, Glyco_transf_5, PF26775 | 0.52 | 46.0 | 3.02e-01 | 98.4% | 27.0% |
| 3854580 | 2007.9.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain | 0.52 | 46.0 | 3.89e-01 | 97.5% | 100.0% |
| 3640586 | 2006.1.6.19 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › IML1 | 0.52 | 41.0 | 3.39e-01 | 85.2% | 100.0% |
| 5047970 | 2003.1.6.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Tubulin nucleotide-binding domain-like › Tubulin | 0.52 | 45.0 | 3.57e-01 | 95.9% | 98.4% |
| 4434474 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.52 | 46.0 | 3.46e-01 | 97.5% | 75.7% |
| None | — | 0.51 | 45.0 | 3.35e-01 | 95.9% | 72.9% | |
| 5045192 | 7512.1.1.13 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › PS_pyruv_trans | 0.51 | 46.0 | 3.94e-01 | 99.2% | 82.6% |
| 3109967 | 7575.1.1.1 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C14 | 0.51 | 37.0 | 3.39e-01 | 77.0% | 79.8% |
D2
medium
residues 47-69_102-149
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hdiA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.52 | 41.0 | 3.05e-01 | 87.3% | 80.3% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3495203 | 109.6.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ras GEF › Ras GEF › RasGEF,RasGEF_N | 0.57 | 48.0 | 2.97e-01 | 91.5% | 47.6% |
| 3614243 | 109.4.1.339 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TRAPPC-Trs85 | 0.54 | 42.0 | 2.43e-01 | 85.9% | 84.2% |
| 3477419 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.52 | 37.0 | 3.01e-01 | 76.1% | 66.7% |