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term1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00305
Bact-Virterm1_saliva_scaffold_3_curated_closed_complete_prodigal-single.1__X__X__00305
Identity
- Kingdom:
- phage
Quality
62.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 21-107
Domain cluster:
rep: Filtrate_w_scaffold_6_prodigal-single.1__X__X__00003__D20-93
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1k07A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.56 | 41.0 | 2.93e-01 | 78.2% | 80.5% |
| 1qh5A00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.51 | 41.0 | 2.99e-01 | 90.8% | 82.3% |
| 5wcmA00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.50 | 37.0 | 2.66e-01 | 78.2% | 68.8% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2495545 | 207.2.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Beta_helix | 0.52 | 44.0 | 2.88e-01 | 100.0% | 68.8% |
| 3265965 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.52 | 42.0 | 2.63e-01 | 87.4% | 65.2% |
| 3875076 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.50 | 36.0 | 3.12e-01 | 74.7% | 56.6% |
D2
medium
residues 108-165
Domain cluster:
representative
D3
medium
residues 381-525_549-601
Domain cluster:
rep: MT325768.1__QJI52473.1__X__00176__D16-168
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002641 | 209.1.2.0 ↗ | a+b complex topology › C-type lectin-like › C-type lectin-like › Sulfatase-modifying factor-like | 0.70 | 60.0 | 4.76e-01 | 100.0% | 47.4% |
| 3619387 | 382.1.1.0 ↗ | few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like | 0.51 | 24.0 | 3.45e-01 | 99.0% | 93.7% |
D4
medium
residues 602-686