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term1_saliva_scaffold_5_curated_closed_gap_prodigal-single.1__X__X__00014
Bact-Virterm1_saliva_scaffold_5_curated_closed_gap_prodigal-single.1__X__X__00014
Identity
- Kingdom:
- phage
Quality
74.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-125
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3n3fA01 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.70 | 31.0 | 4.44e-01 | 93.0% | 95.3% |
| 3hshE00 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.70 | 31.0 | 4.10e-01 | 95.0% | 76.4% |
| 1yu0A01 | 2.10.10.30 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.61 | 29.0 | 3.70e-01 | 95.0% | 82.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3405960 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.72 | 32.0 | 4.64e-01 | 94.0% | 97.7% |
| 3917719 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.71 | 32.0 | 4.54e-01 | 95.0% | 93.3% |
| 1505155 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.71 | 32.0 | 4.20e-01 | 95.0% | 76.8% |
| 3900165 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.70 | 32.0 | 4.52e-01 | 95.0% | 97.7% |
| 4967026 | 376.1.2.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain | 0.69 | 32.0 | 3.91e-01 | 70.0% | 67.7% |
| 3987740 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.69 | 29.0 | 4.42e-01 | 95.0% | 97.5% |
| 1281772 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.69 | 31.0 | 4.11e-01 | 95.0% | 77.8% |
| 1107990 | 3761.1.1.1 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N | 0.61 | 29.0 | 3.74e-01 | 95.0% | 84.0% |
D2
high
residues 133-235
Domain cluster:
rep: As_gut_js4906-26-3_S26_scaffold_18_curated_prodigal-single.1__X__X__00248__D81-179
CATH (45)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1z5hA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.77 | 46.0 | 3.89e-01 | 100.0% | 36.5% |
| 6ea2A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.76 | 53.0 | 4.32e-01 | 100.0% | 40.1% |
| 5zi7A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.75 | 53.0 | 4.30e-01 | 100.0% | 40.5% |
| 1vq8A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.70 | 33.0 | 3.75e-01 | 89.3% | 57.7% |
| 1rgxA02 | 2.60.40.4230 | Mainly Beta › Sandwich › Immunoglobulin-like › Resistin head domain | 0.70 | 40.0 | 4.84e-01 | 100.0% | 90.6% |
| 4fkeA01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.69 | 51.0 | 3.96e-01 | 100.0% | 36.4% |
| 2zuvA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 54.0 | 5.39e-01 | 100.0% | 80.2% |
| 2xq0A01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.67 | 48.0 | 3.99e-01 | 100.0% | 43.0% |
| 1rl2A01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 32.0 | 4.08e-01 | 91.3% | 80.4% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 33.0 | 4.42e-01 | 90.3% | 98.0% |
| 4fgmA01 | 2.60.40.3650 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.65 | 46.0 | 3.83e-01 | 100.0% | 43.6% |
| 3l81A02 | 2.60.40.1170 | Mainly Beta › Sandwich › Immunoglobulin-like › Mu homology domain, subdomain B | 0.64 | 44.0 | 4.35e-01 | 100.0% | 66.4% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.63 | 33.0 | 3.99e-01 | 92.2% | 77.6% |
| 1o7dC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.62 | 44.0 | 4.72e-01 | 97.1% | 84.3% |
| 1tg7A05 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.61 | 44.0 | 3.69e-01 | 100.0% | 44.3% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.61 | 33.0 | 3.82e-01 | 92.2% | 74.6% |
| 3fjsC00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.59 | 42.0 | 4.23e-01 | 100.0% | 72.0% |
| 8dhaA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 42.0 | 4.57e-01 | 87.4% | 88.5% |
| 1cs6A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 44.0 | 4.49e-01 | 99.0% | 83.7% |
| 3irpX02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 49.0 | 4.36e-01 | 100.0% | 64.2% |
| 5fq0A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 42.0 | 4.15e-01 | 100.0% | 72.7% |
| 5ikuA01 | 2.60.120.380 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 40.0 | 4.04e-01 | 100.0% | 74.0% |
| 2ww8A02 | 2.60.40.2110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 50.0 | 4.05e-01 | 100.0% | 51.5% |
| 4rd7A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 41.0 | 3.94e-01 | 100.0% | 67.2% |
| 2b8mA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.56 | 42.0 | 4.12e-01 | 100.0% | 74.3% |
| 1r17A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 50.0 | 4.34e-01 | 100.0% | 64.6% |
| 4cuaA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 45.0 | 3.74e-01 | 88.3% | 92.7% |
| 3vmnA03 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.55 | 46.0 | 4.15e-01 | 91.3% | 97.2% |
| 1o4tA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 40.0 | 3.92e-01 | 99.0% | 69.6% |
| 4b60A02 | 2.60.40.1290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 48.0 | 4.21e-01 | 100.0% | 64.1% |
| 1vw3C01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 44.0 | 4.13e-01 | 97.1% | 70.2% |
| 1sefA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.54 | 40.0 | 3.73e-01 | 100.0% | 61.8% |
| 3l4yA05 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.54 | 44.0 | 4.03e-01 | 90.3% | 98.6% |
| 1i82A00 | 2.60.40.1190 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 45.0 | 3.76e-01 | 95.1% | 82.5% |
| 2wfwB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.53 | 32.0 | 3.82e-01 | 92.2% | 91.0% |
| 3wnkA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.53 | 43.0 | 4.05e-01 | 96.1% | 71.2% |
| 1yllC02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 39.0 | 3.83e-01 | 100.0% | 73.4% |
| 2oa2A01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 41.0 | 3.94e-01 | 100.0% | 71.1% |
| 2qjvA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 42.0 | 4.07e-01 | 99.0% | 76.1% |
| 2vpvA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.52 | 40.0 | 4.15e-01 | 100.0% | 89.4% |
| 4p02B01 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.52 | 44.0 | 4.07e-01 | 100.0% | 72.2% |
| 2i45D00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 36.0 | 3.68e-01 | 100.0% | 75.8% |
| 2x12A01 | 2.60.40.2010 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 40.0 | 3.32e-01 | 100.0% | 46.3% |
| 1lr5B00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.51 | 41.0 | 3.56e-01 | 100.0% | 56.0% |
| 2wz8A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 43.0 | 3.92e-01 | 98.1% | 70.4% |
ECOD (47)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4973274 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.73 | 35.0 | 4.56e-01 | 90.3% | 83.6% |
| 3244240 | 4081.1.1.5 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Peptidase_M1_N | 0.73 | 53.0 | 4.08e-01 | 100.0% | 35.1% |
| 5051013 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.72 | 50.0 | 4.96e-01 | 98.1% | 69.5% |
| 2642946 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.72 | 38.0 | 4.02e-01 | 96.1% | 57.1% |
| 4028153 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.72 | 52.0 | 4.21e-01 | 100.0% | 41.1% |
| 4932962 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.70 | 44.0 | 4.29e-01 | 96.1% | 56.5% |
| 8624 | 929.1.1.1 ↗ | beta duplicates or obligate multimers › Resistin › Resistin › Resistin › Resistin | 0.70 | 40.0 | 4.31e-01 | 100.0% | 65.2% |
| 4955177 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.69 | 51.0 | 5.11e-01 | 100.0% | 76.2% |
| 5028066 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.68 | 35.0 | 4.31e-01 | 94.2% | 78.5% |
| 3741599 | 10.12.1.5 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › PMI_typeI_C | 0.68 | 39.0 | 4.07e-01 | 100.0% | 61.1% |
| 5054268 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.67 | 35.0 | 4.20e-01 | 95.1% | 76.9% |
| 4957573 | 11.41.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Baseplate wedge protein gp6 Ig-like domain › Baseplate wedge protein gp6 Ig-like domain | 0.67 | 47.0 | 5.27e-01 | 100.0% | 98.7% |
| 4327708 | 11.1.5.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C | 0.67 | 44.0 | 4.38e-01 | 100.0% | 63.9% |
| 3969569 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.66 | 33.0 | 4.12e-01 | 91.3% | 80.0% |
| 3913587 | 10.32.1.233 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GBD_Hemicentin | 0.66 | 48.0 | 4.89e-01 | 100.0% | 78.0% |
| 4266680 | 11.1.5.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C | 0.65 | 43.0 | 3.83e-01 | 100.0% | 47.6% |
| 4476087 | 11.1.5.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C | 0.65 | 43.0 | 3.73e-01 | 100.0% | 44.5% |
| 5039702 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 29.0 | 4.14e-01 | 90.3% | 97.8% |
| 4311691 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.63 | 36.0 | 3.29e-01 | 98.1% | 42.2% |
| 3747178 | 11.1.1.969 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_TRAPPC10 | 0.61 | 47.0 | 4.30e-01 | 100.0% | 62.2% |
| 3989692 | 4081.1.1.12 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › DUF2207 | 0.61 | 49.0 | 3.86e-01 | 100.0% | 41.9% |
| 3590148 | 11.1.5.53 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › GBS104-like_Ig | 0.61 | 44.0 | 3.52e-01 | 100.0% | 38.5% |
| 3486034 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.61 | 45.0 | 4.67e-01 | 100.0% | 84.2% |
| 4584501 | 2.1.1.57 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecO_N | 0.61 | 34.0 | 3.84e-01 | 92.2% | 71.2% |
| 4237578 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.60 | 34.0 | 3.23e-01 | 96.1% | 45.8% |
| 3682877 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.60 | 43.0 | 3.81e-01 | 100.0% | 52.0% |
| 4972663 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.59 | 46.0 | 4.62e-01 | 96.1% | 80.0% |
| 4569091 | 11.1.1.88 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM9_1 | 0.59 | 49.0 | 4.14e-01 | 91.3% | 82.3% |
| 3348374 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.59 | 42.0 | 4.48e-01 | 98.1% | 84.4% |
| 4098296 | 11.1.5.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C | 0.59 | 42.0 | 3.62e-01 | 100.0% | 47.5% |
| 2427475 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 28.0 | 3.28e-01 | 84.5% | 62.7% |
| 3695452 | 11.1.1.577 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PFF1_C | 0.58 | 40.0 | 3.14e-01 | 100.0% | 31.6% |
| 4185866 | 11.1.5.85 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › PFF1_C | 0.58 | 39.0 | 3.25e-01 | 99.0% | 38.0% |
| 4459811 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.58 | 41.0 | 3.91e-01 | 100.0% | 62.5% |
| 4327703 | 11.1.1.577 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PFF1_C | 0.57 | 38.0 | 3.25e-01 | 99.0% | 40.0% |
| 4026174 | 5095.1.1.1 ↗ | beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 | 0.57 | 42.0 | 3.86e-01 | 100.0% | 60.8% |
| 4941750 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.57 | 41.0 | 3.86e-01 | 100.0% | 60.8% |
| 4234366 | 2.4.1.2 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE_2 | 0.56 | 32.0 | 3.05e-01 | 97.1% | 46.4% |
| 4262088 | 10.12.1.58 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › DMSP_lyase | 0.56 | 40.0 | 3.16e-01 | 100.0% | 35.8% |
| 4954606 | 10.1.2.186 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) › DUF3344 | 0.56 | 44.0 | 4.07e-01 | 100.0% | 66.9% |
| 3279676 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.54 | 41.0 | 3.99e-01 | 100.0% | 71.3% |
| 3781038 | 10.12.1.27 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_3 | 0.53 | 38.0 | 3.66e-01 | 74.8% | 90.8% |
| 3093592 | 12.1.1.21 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_66 | 0.53 | 42.0 | 4.01e-01 | 97.1% | 71.5% |
| 3254415 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.53 | 45.0 | 4.54e-01 | 100.0% | 91.4% |
| 1779244 | 12.1.1.21 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Glyco_hydro_66 | 0.52 | 44.0 | 4.16e-01 | 91.3% | 96.8% |
| 4443040 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.51 | 37.0 | 3.69e-01 | 95.1% | 74.0% |
| 3734469 | 10.12.1.39 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › Cupin_2 | 0.51 | 41.0 | 3.51e-01 | 89.3% | 86.5% |
D3
medium
residues 366-409
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3hshE00 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.80 | 62.0 | 5.79e-01 | 86.4% | 80.0% |
| 3n3fA01 | 3.40.1620.70 | Alpha Beta › 3-Layer(aba) Sandwich › YefM-like fold › | 0.75 | 57.0 | 5.76e-01 | 84.1% | 100.0% |
| 1ob8A00 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.72 | 61.0 | 4.51e-01 | 97.7% | 90.8% |
| 4q6bA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 61.0 | 4.27e-01 | 100.0% | 85.1% |
| 1wquA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.66 | 52.0 | 4.01e-01 | 95.5% | 44.7% |
| 4bndA01 | 3.40.50.1000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like | 0.64 | 51.0 | 3.64e-01 | 97.7% | 52.6% |
| 4paaA02 | 3.30.9.10 | Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 | 0.64 | 48.0 | 3.33e-01 | 86.4% | 61.2% |
| 1yu0A01 | 2.10.10.30 | Mainly Beta › Ribbon › Seminal Fluid Protein PDC-109 (Domain B) › | 0.63 | 52.0 | 5.03e-01 | 97.7% | 84.3% |
| 4dunA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.61 | 49.0 | 3.66e-01 | 95.5% | 74.0% |
| 1ym5A01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.56 | 45.0 | 3.31e-01 | 95.5% | 46.3% |
| 4oj5B01 | 3.30.2020.50 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.55 | 43.0 | 3.73e-01 | 97.7% | 92.7% |
| 3c7xA00 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.55 | 46.0 | 3.05e-01 | 97.7% | 56.6% |
| 5ha4A02 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.55 | 40.0 | 3.14e-01 | 95.5% | 69.9% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 46.0 | 3.41e-01 | 100.0% | 39.5% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3900165 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.83 | 61.0 | 6.25e-01 | 79.5% | 95.3% |
| 3405960 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.83 | 64.0 | 6.47e-01 | 84.1% | 100.0% |
| 3917719 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.81 | 60.0 | 5.96e-01 | 79.5% | 91.1% |
| 1505155 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.80 | 62.0 | 5.79e-01 | 86.4% | 78.6% |
| 3921177 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.78 | 63.0 | 5.84e-01 | 88.6% | 72.7% |
| 3528795 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.78 | 62.0 | 6.22e-01 | 88.6% | 93.3% |
| 3623217 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.77 | 66.0 | 6.35e-01 | 95.5% | 92.0% |
| 3987740 | 3761.1.1.0 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related | 0.76 | 58.0 | 6.03e-01 | 84.1% | 100.0% |
| 1281772 | 3761.1.1.2 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Collagen_trimer | 0.76 | 58.0 | 5.51e-01 | 86.4% | 81.5% |
| 3989854 | 3761.1.1.4 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › CFSR | 0.75 | 65.0 | 5.26e-01 | 100.0% | 88.2% |
| 3545467 | 391.1.2.10 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_1st | 0.72 | 50.0 | 5.25e-01 | 75.0% | 80.0% |
| 5010105 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.71 | 61.0 | 4.44e-01 | 97.7% | 92.0% |
| 3893051 | 391.1.1.5 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › TILa | 0.71 | 47.0 | 5.06e-01 | 70.5% | 85.7% |
| 3989853 | 77.1.1.13 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › CFSR | 0.71 | 62.0 | 3.72e-01 | 100.0% | 34.9% |
| 4149106 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.71 | 60.0 | 4.29e-01 | 97.7% | 85.2% |
| 4177188 | 3312.1.1.0 ↗ | a+b two layers › Domain 2 in immunoglobulin A protease › Domain 2 in immunoglobulin A protease › Domain 2 in immunoglobulin A protease | 0.70 | 56.0 | 4.70e-01 | 88.6% | 69.3% |
| 4632068 | 4126.1.1.6 ↗ | a/b three-layered sandwiches › beta-carbonic anhydrase-like › beta-carbonic anhydrase › beta-carbonic anhydrase › DabA | 0.70 | 58.0 | 3.71e-01 | 100.0% | 46.7% |
| 4999472 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.69 | 53.0 | 3.54e-01 | 86.4% | 22.6% |
| 3890372 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.67 | 56.0 | 4.31e-01 | 100.0% | 57.3% |
| 3219762 | 3105.1.1.0 ↗ | a+b three layers › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related › thylakoid acid phosphatase domain-related | 0.66 | 55.0 | 3.82e-01 | 97.7% | 67.9% |
| 4004053 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.66 | 51.0 | 4.04e-01 | 88.6% | 69.5% |
| 4928895 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.65 | 55.0 | 3.43e-01 | 100.0% | 24.3% |
| 5002640 | 3761.1.1.1 ↗ | beta duplicates or obligate multimers › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Major tropism determinant (Mtd) trimerization domain-related › Mtd_N | 0.62 | 51.0 | 5.00e-01 | 100.0% | 96.0% |
| 3967702 | 286.1.1.2 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › PhzC-PhzF | 0.61 | 48.0 | 3.64e-01 | 95.5% | 79.2% |
| 3970156 | 286.1.1.0 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like | 0.61 | 47.0 | 3.64e-01 | 93.2% | 81.7% |
| 3719395 | 6110.1.1.1 ↗ | alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 | 0.56 | 48.0 | 2.80e-01 | 97.7% | 33.3% |
| 3699229 | 6110.1.1.1 ↗ | alpha superhelices › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › Linker domain of cytoplasmic dynein heavy chain › DHC_N2 | 0.56 | 47.0 | 2.67e-01 | 95.5% | 21.3% |
| 3930754 | 5.1.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › Hemopexin | 0.55 | 46.0 | 3.05e-01 | 100.0% | 56.0% |
| 3939920 | 5.1.1.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed | 0.55 | 42.0 | 2.79e-01 | 88.6% | 37.7% |
| 3708790 | 2004.1.1.26 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin | 0.51 | 34.0 | 2.12e-01 | 90.9% | 10.2% |