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term1_saliva_scaffold_5_curated_closed_gap_prodigal-single.1__X__X__00049
Bact-Virterm1_saliva_scaffold_5_curated_closed_gap_prodigal-single.1__X__X__00049
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-93
Domain cluster:
rep: MG752970.1__AVH85358.1__RsoM2USA_430__00430__D11-89
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00166.27 best | Cpn10 | 76.9 | 1.40e-21 | 100.0% | 91.4% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6mrc100 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.89 | 83.0 | 7.85e-01 | 100.0% | 85.0% |
| 1p3hB00 | 2.30.33.40 | Mainly Beta › Roll › 10 Kd Chaperonin, Protein Cpn10; Chain O › GroES chaperonin | 0.79 | 74.0 | 7.02e-01 | 100.0% | 87.8% |
| 2ke9A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 30.0 | 3.39e-01 | 80.0% | 64.2% |
| 1jqbA01 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.56 | 51.0 | 3.78e-01 | 100.0% | 52.1% |
| 2j4xA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 38.0 | 4.00e-01 | 70.6% | 93.1% |
| 4gudB00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.52 | 37.0 | 2.89e-01 | 75.3% | 36.3% |
| 7k7jA02 | 2.60.40.1770 | Mainly Beta › Sandwich › Immunoglobulin-like › ephrin a2 ectodomain | 0.52 | 26.0 | 2.93e-01 | 72.9% | 58.1% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4147631 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.95 | 72.0 | 7.71e-01 | 100.0% | 88.0% |
| 3674955 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.93 | 70.0 | 7.21e-01 | 100.0% | 82.5% |
| 3508217 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.92 | 88.0 | 7.89e-01 | 100.0% | 88.2% |
| 3938500 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.92 | 86.0 | 8.45e-01 | 98.8% | 93.3% |
| 4378688 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.91 | 87.0 | 8.30e-01 | 100.0% | 89.5% |
| 3252896 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.90 | 86.0 | 8.24e-01 | 100.0% | 91.6% |
| 4341607 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.90 | 85.0 | 8.07e-01 | 100.0% | 86.7% |
| 3175923 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.89 | 83.0 | 7.82e-01 | 100.0% | 86.0% |
| 4082853 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.88 | 83.0 | 8.03e-01 | 100.0% | 89.4% |
| 3594024 | 236.1.2.0 ↗ | beta barrels › GroES-like › GroES-related › GroES | 0.85 | 76.0 | 7.43e-01 | 100.0% | 88.9% |
| 4173931 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.85 | 80.0 | 7.70e-01 | 100.0% | 89.5% |
| 4029028 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.82 | 77.0 | 7.27e-01 | 100.0% | 86.0% |
| 4182470 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.81 | 75.0 | 7.21e-01 | 100.0% | 89.4% |
| 4417276 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.78 | 73.0 | 6.88e-01 | 100.0% | 91.0% |
| 2794380 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.74 | 66.0 | 6.43e-01 | 100.0% | 87.1% |
| 4024554 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.74 | 70.0 | 6.62e-01 | 100.0% | 89.8% |
| 2794379 | 236.1.2.1 ↗ | beta barrels › GroES-like › GroES-related › GroES › Cpn10 | 0.71 | 61.0 | 5.88e-01 | 100.0% | 84.2% |
| 3243536 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 33.0 | 3.34e-01 | 74.1% | 51.8% |
| 5079397 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.58 | 36.0 | 3.67e-01 | 100.0% | 62.4% |
| 3865764 | 2.1.1.261 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › NRG2_N | 0.55 | 43.0 | 3.84e-01 | 100.0% | 57.0% |
| 3212056 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 36.0 | 3.70e-01 | 98.8% | 71.2% |
| 3587555 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 31.0 | 3.39e-01 | 88.2% | 71.4% |