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term1_saliva_scaffold_5_curated_closed_gap_prodigal-single.1__X__X__00103
Bact-Virterm1_saliva_scaffold_5_curated_closed_gap_prodigal-single.1__X__X__00103
Identity
- Kingdom:
- phage
Quality
79.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-175
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oq8A00 | 2.60.40.2930 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.63 | 33.0 | 3.50e-01 | 100.0% | 56.0% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.62 | 21.0 | 3.48e-01 | 91.2% | 82.5% |
| 1wznA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.62 | 21.0 | 3.67e-01 | 91.2% | 92.9% |
| 3fmbA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 36.0 | 4.49e-01 | 100.0% | 100.0% |
| 3bn7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 36.0 | 4.52e-01 | 98.8% | 100.0% |
| 2oojA00 | 2.40.350.10 | Mainly Beta › Beta Barrel › AOC barrel-like › SO1590-like | 0.59 | 35.0 | 3.91e-01 | 74.3% | 75.6% |
| 2ns9A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.55 | 33.0 | 3.57e-01 | 81.9% | 68.2% |
| 4bd4A00 | 2.60.40.200 | Mainly Beta › Sandwich › Immunoglobulin-like › Superoxide dismutase, copper/zinc binding domain | 0.55 | 29.0 | 3.55e-01 | 91.2% | 78.0% |
| 2zf3C00 | 2.50.20.30 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › | 0.51 | 27.0 | 2.67e-01 | 86.0% | 47.8% |
| 1wpuA00 | 3.40.1510.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hut operon positive regulatory protein HutP › Hut operon regulatory protein HutP | 0.50 | 28.0 | 2.96e-01 | 95.9% | 59.2% |
ECOD (14)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3808505 | 243.3.1.1 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin | 0.76 | 28.0 | 3.95e-01 | 92.4% | 68.2% |
| 3223328 | 304.8.1.78 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7637 | 0.69 | 42.0 | 5.24e-01 | 92.4% | 99.0% |
| 3210886 | 304.8.1.78 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7637 | 0.68 | 42.0 | 5.21e-01 | 91.8% | 100.0% |
| 3220212 | 304.12.1.11 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › DUF7637 | 0.68 | 43.0 | 5.23e-01 | 93.6% | 98.2% |
| 3934872 | 3122.1.1.2 ↗ | a+b complex topology › MESD › MESD › MESD › SCVP | 0.66 | 40.0 | 4.94e-01 | 87.1% | 98.1% |
| 3231858 | 304.8.1.72 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › SCVP | 0.65 | 38.0 | 4.75e-01 | 78.4% | 97.0% |
| 5034706 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.65 | 25.0 | 3.67e-01 | 93.0% | 78.7% |
| 150490 | 3123.1.1.1 ↗ | a+b two layers › Nuclease AFV1-157 › Nuclease AFV1-157 › Nuclease AFV1-157 › DUF3258 | 0.63 | 33.0 | 3.46e-01 | 100.0% | 54.2% |
| 2765234 | 243.3.1.12 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › SQAPI | 0.62 | 27.0 | 3.56e-01 | 97.1% | 71.1% |
| 3729608 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.60 | 40.0 | 4.57e-01 | 99.4% | 92.0% |
| 3703973 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.57 | 30.0 | 3.47e-01 | 96.5% | 66.9% |
| 3339476 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.55 | 35.0 | 3.52e-01 | 88.9% | 61.1% |
| 3456369 | 897.1.1.1 ↗ | a+b two layers › Acidic mitochondrial matrix protein p32-like › Acidic mitochondrial matrix protein p32 › Acidic mitochondrial matrix protein p32 › MAM33 | 0.53 | 36.0 | 3.57e-01 | 90.6% | 62.7% |
| 3801259 | 210.2.1.1 ↗ | a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C | 0.52 | 46.0 | 3.56e-01 | 97.1% | 82.1% |
D2
high
residues 181-306