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term1_stool_scaffold_19_prodigal-single.1__X__X__00006
Bact-Virterm1_stool_scaffold_19_prodigal-single.1__X__X__00006
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-183
Domain cluster:
rep: NC_021330__YP_008059651.1__M202-gp129__00089__D21-171
Pfam (5)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13177.13 best | DNA_pol3_delta2 | 113.0 | 2.00e-32 | 91.6% | 95.0% |
| PF00004.36 | AAA | 40.6 | 4.80e-10 | 80.9% | 97.0% |
| PF13401.13 | AAA_22 | 36.7 | 6.70e-09 | 80.3% | 92.3% |
| PF03215.22 | Rad17 | 24.3 | 3.80e-05 | 46.6% | 36.6% |
| PF05496.19 | RuvB_N | 31.3 | 2.30e-07 | 36.0% | 35.2% |
D2
high
residues 188-248
Domain cluster:
rep: putative_replication_factor_C_small_subunit__YP_007354396__Acanthamoeba_polyphaga_moumouvirus__1269028__D162-222
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1njgB01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.92 | 85.0 | 7.96e-01 | 100.0% | 84.9% |
| 1sxjE02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.90 | 83.0 | 8.14e-01 | 100.0% | 93.8% |
| 3zh9B02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.88 | 80.0 | 7.65e-01 | 100.0% | 91.4% |
| 1hqcA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.88 | 79.0 | 7.36e-01 | 100.0% | 86.8% |
| 1iqpA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.87 | 79.0 | 7.82e-01 | 100.0% | 95.3% |
| 6vvoC02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.87 | 78.0 | 7.70e-01 | 100.0% | 95.3% |
| 3pvsA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.84 | 77.0 | 7.10e-01 | 100.0% | 97.4% |
| 1jqjD03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.84 | 74.0 | 6.62e-01 | 100.0% | 75.6% |
| 2kruA01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.83 | 58.0 | 6.29e-01 | 73.8% | 90.4% |
| 3bosA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.83 | 74.0 | 7.25e-01 | 100.0% | 97.0% |
| 1sxjD02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.82 | 75.0 | 7.14e-01 | 100.0% | 92.9% |
| 1sxjC02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.82 | 72.0 | 6.98e-01 | 100.0% | 97.1% |
| 2c9oB03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.81 | 71.0 | 6.48e-01 | 100.0% | 80.7% |
| 5vjhB02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.80 | 71.0 | 6.18e-01 | 100.0% | 85.9% |
| 3e46A02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.80 | 50.0 | 5.70e-01 | 73.8% | 90.7% |
| 3sykA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.79 | 71.0 | 6.24e-01 | 100.0% | 91.1% |
| 2dnaA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.79 | 55.0 | 5.36e-01 | 85.2% | 67.2% |
| 3uk6A02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.78 | 68.0 | 6.20e-01 | 100.0% | 80.7% |
| 2g3qA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.77 | 49.0 | 5.61e-01 | 98.4% | 93.0% |
| 1xb2B01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.76 | 53.0 | 5.41e-01 | 82.0% | 75.0% |
| 6qs7C01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.76 | 65.0 | 5.16e-01 | 100.0% | 96.2% |
| 2daiA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.74 | 53.0 | 4.80e-01 | 91.8% | 56.6% |
| 4ae4A00 | 1.20.120.1920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UBAP1 SOUBA domain | 0.73 | 57.0 | 4.68e-01 | 100.0% | 46.5% |
| 2l09A01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.71 | 50.0 | 5.28e-01 | 73.8% | 92.3% |
| 4a3vB01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.71 | 61.0 | 5.89e-01 | 100.0% | 93.1% |
| 2kxeA00 | 1.10.8.800 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › D-family DNA polymerase, DP1 subunit N-terminal domain | 0.70 | 57.0 | 5.46e-01 | 93.4% | 80.6% |
| 5e37A02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.68 | 47.0 | 4.23e-01 | 73.8% | 60.5% |
| 3lynB00 | 1.20.150.10 | Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein | 0.65 | 54.0 | 4.36e-01 | 95.1% | 76.6% |
| 2jujA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.62 | 45.0 | 4.67e-01 | 83.6% | 87.5% |
| 1h3fA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.62 | 50.0 | 4.07e-01 | 90.2% | 50.4% |
| 4ag6A02 | 1.10.8.730 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.60 | 47.0 | 3.93e-01 | 86.9% | 61.8% |
| 3lkbA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 46.0 | 3.30e-01 | 100.0% | 80.9% |
| 6wgyA02 | 1.10.230.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 | 0.55 | 38.0 | 3.26e-01 | 72.1% | 53.5% |
| 3o6xA02 | 1.20.120.1560 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.55 | 38.0 | 2.94e-01 | 73.8% | 70.9% |
| 2ewfA02 | 1.20.1270.310 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.54 | 40.0 | 3.67e-01 | 78.7% | 81.5% |
| 1eijA00 | 1.10.8.140 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain | 0.54 | 42.0 | 3.99e-01 | 85.2% | 80.6% |
| 1ej5A00 | 3.90.810.10 | Alpha Beta › Alpha-Beta Complex › SerineThreonine-protein kinase PAK-alpha; Chain A › CRIB domain | 0.52 | 41.0 | 3.57e-01 | 95.1% | 67.3% |
ECOD (100)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4965689 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.97 | 91.0 | 9.22e-01 | 98.4% | 100.0% |
| 4449599 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.95 | 89.0 | 8.44e-01 | 100.0% | 88.6% |
| 3994437 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.94 | 89.0 | 8.67e-01 | 100.0% | 96.9% |
| 5082447 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.94 | 88.0 | 8.14e-01 | 100.0% | 82.7% |
| 3387061 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.94 | 88.0 | 8.60e-01 | 100.0% | 95.4% |
| 3164804 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.93 | 87.0 | 8.28e-01 | 100.0% | 88.6% |
| 4927213 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.93 | 84.0 | 8.53e-01 | 100.0% | 98.3% |
| 3606743 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.93 | 87.0 | 8.00e-01 | 100.0% | 81.3% |
| 4947827 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.93 | 84.0 | 8.46e-01 | 100.0% | 96.7% |
| 5006918 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.93 | 84.0 | 8.50e-01 | 95.1% | 96.7% |
| 4160285 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.93 | 84.0 | 8.47e-01 | 100.0% | 96.7% |
| 3510515 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.92 | 86.0 | 8.21e-01 | 100.0% | 90.0% |
| 4934350 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.92 | 86.0 | 8.47e-01 | 100.0% | 93.8% |
| 4309019 | 148.1.3.21 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_4 | 0.92 | 85.0 | 7.51e-01 | 100.0% | 77.6% |
| 4444764 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.92 | 85.0 | 8.10e-01 | 100.0% | 87.1% |
| 3724955 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.92 | 84.0 | 8.20e-01 | 100.0% | 90.8% |
| 5040775 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.92 | 84.0 | 8.55e-01 | 100.0% | 100.0% |
| 4993112 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.92 | 85.0 | 6.40e-01 | 100.0% | 46.2% |
| 3621809 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.92 | 84.0 | 8.00e-01 | 98.4% | 87.1% |
| 3440546 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.91 | 85.0 | 7.67e-01 | 100.0% | 76.2% |
| 4576684 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.91 | 86.0 | 8.12e-01 | 100.0% | 87.1% |
| 4201751 | 148.1.3.21 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_4 | 0.91 | 84.0 | 7.44e-01 | 100.0% | 77.6% |
| 5036744 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.91 | 84.0 | 7.99e-01 | 100.0% | 87.1% |
| 3793159 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.91 | 84.0 | 8.27e-01 | 100.0% | 95.4% |
| 3950635 | 148.1.3.47 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › DNAX_ATPase_lid | 0.91 | 85.0 | 8.04e-01 | 100.0% | 90.0% |
| 4150365 | 148.1.3.21 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_4 | 0.91 | 84.0 | 7.40e-01 | 100.0% | 77.6% |
| 4994187 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.91 | 84.0 | 8.26e-01 | 100.0% | 93.8% |
| 5027108 | 148.1.3.222 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF27254 | 0.91 | 81.0 | 8.25e-01 | 96.7% | 98.3% |
| 5051561 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.90 | 80.0 | 8.14e-01 | 100.0% | 96.7% |
| 3240928 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.90 | 84.0 | 8.19e-01 | 100.0% | 100.0% |
| 4474463 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.90 | 84.0 | 7.99e-01 | 100.0% | 87.1% |
| 52232 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.90 | 83.0 | 7.67e-01 | 100.0% | 88.0% |
| 4027556 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.90 | 83.0 | 7.89e-01 | 100.0% | 90.0% |
| 5020254 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.90 | 83.0 | 8.13e-01 | 100.0% | 96.9% |
| 4528166 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.90 | 82.0 | 8.05e-01 | 100.0% | 92.3% |
| 3080975 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.90 | 82.0 | 8.07e-01 | 100.0% | 93.8% |
| 4948160 | 148.1.3.405 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Rep_fac_C | 0.89 | 83.0 | 8.12e-01 | 100.0% | 93.8% |
| 4977023 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.89 | 82.0 | 7.79e-01 | 100.0% | 85.7% |
| 3742104 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.89 | 81.0 | 8.17e-01 | 100.0% | 100.0% |
| 3893638 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.89 | 81.0 | 7.99e-01 | 100.0% | 93.8% |
| 3653509 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.89 | 81.0 | 8.00e-01 | 100.0% | 93.8% |
| 4980405 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.89 | 82.0 | 8.01e-01 | 100.0% | 93.8% |
| 5054243 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.89 | 82.0 | 8.04e-01 | 100.0% | 93.8% |
| 3466646 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.89 | 81.0 | 7.52e-01 | 100.0% | 81.3% |
| 4199378 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.89 | 82.0 | 8.02e-01 | 100.0% | 95.4% |
| 3548812 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.89 | 81.0 | 7.96e-01 | 100.0% | 93.8% |
| 3619511 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.89 | 81.0 | 7.99e-01 | 100.0% | 93.8% |
| 5003869 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.88 | 81.0 | 7.99e-01 | 100.0% | 98.5% |
| 4078005 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.88 | 81.0 | 8.18e-01 | 100.0% | 100.0% |
| 4579163 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.88 | 80.0 | 6.80e-01 | 100.0% | 63.2% |
| 3802314 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.88 | 81.0 | 7.51e-01 | 100.0% | 92.0% |
| 3269672 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.88 | 81.0 | 7.91e-01 | 100.0% | 98.5% |
| 4029750 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.88 | 80.0 | 7.90e-01 | 100.0% | 93.8% |
| 4069825 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.88 | 81.0 | 7.90e-01 | 100.0% | 93.8% |
| 5060756 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.88 | 80.0 | 7.83e-01 | 100.0% | 93.8% |
| 3503914 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.88 | 80.0 | 7.81e-01 | 100.0% | 92.3% |
| 4966288 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.88 | 80.0 | 7.88e-01 | 100.0% | 93.8% |
| 5062561 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.88 | 80.0 | 7.81e-01 | 100.0% | 92.3% |
| 5046176 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.88 | 80.0 | 7.87e-01 | 100.0% | 95.4% |
| 4462629 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.87 | 81.0 | 7.92e-01 | 100.0% | 93.8% |
| 3821228 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.87 | 80.0 | 7.83e-01 | 100.0% | 95.4% |
| 4979456 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.87 | 80.0 | 7.40e-01 | 100.0% | 81.3% |
| 3785772 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.87 | 79.0 | 7.56e-01 | 100.0% | 90.0% |
| 4940300 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.87 | 80.0 | 7.82e-01 | 100.0% | 93.8% |
| 5040633 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.86 | 79.0 | 7.73e-01 | 100.0% | 95.4% |
| 3247646 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.86 | 78.0 | 7.65e-01 | 100.0% | 93.8% |
| 4032558 | 148.1.3.222 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF27254 | 0.86 | 78.0 | 7.64e-01 | 100.0% | 98.5% |
| 3742139 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.86 | 80.0 | 7.85e-01 | 100.0% | 95.4% |
| 4590512 | 148.1.3.15 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_assoc_2 | 0.86 | 78.0 | 7.26e-01 | 100.0% | 84.0% |
| 3191809 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.86 | 79.0 | 6.39e-01 | 100.0% | 98.2% |
| 5031386 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.86 | 78.0 | 7.67e-01 | 100.0% | 93.8% |
| 3932276 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.86 | 78.0 | 7.67e-01 | 100.0% | 93.8% |
| 4029284 | 148.1.3.15 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_assoc_2 | 0.86 | 77.0 | 7.01e-01 | 100.0% | 86.3% |
| 4379243 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.86 | 78.0 | 7.64e-01 | 100.0% | 98.5% |
| 3312436 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.85 | 78.0 | 7.43e-01 | 100.0% | 87.1% |
| 4140805 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.85 | 78.0 | 7.64e-01 | 100.0% | 93.8% |
| 3388508 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.85 | 77.0 | 7.57e-01 | 100.0% | 93.8% |
| 5057800 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 77.0 | 7.56e-01 | 100.0% | 93.8% |
| 4975494 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 77.0 | 7.54e-01 | 100.0% | 93.8% |
| 4016413 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 77.0 | 6.86e-01 | 100.0% | 94.1% |
| 3520054 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.85 | 77.0 | 7.55e-01 | 100.0% | 98.5% |
| 4995735 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.85 | 74.0 | 7.51e-01 | 100.0% | 96.7% |
| 3738684 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 75.0 | 7.61e-01 | 100.0% | 100.0% |
| 4889454 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.84 | 74.0 | 7.05e-01 | 95.1% | 91.4% |
| 3482017 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.84 | 77.0 | 7.16e-01 | 100.0% | 93.3% |
| 3611993 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.84 | 76.0 | 7.24e-01 | 98.4% | 98.6% |
| 3720295 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.83 | 77.0 | 6.41e-01 | 100.0% | 98.0% |
| 4017701 | 148.1.3.173 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_RFC1 | 0.83 | 75.0 | 6.69e-01 | 100.0% | 92.9% |
| 3688793 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.83 | 76.0 | 6.16e-01 | 100.0% | 64.5% |
| 3728370 | 148.1.3.42 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RCF1-5-like_lid | 0.83 | 75.0 | 6.66e-01 | 100.0% | 92.9% |
| 4034060 | 327.10.1.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Ribosome-binding factor A (RbfA)-related › Ribosome-binding factor A (RbfA)-related | 0.83 | 74.0 | 7.10e-01 | 100.0% | 92.9% |
| 3987908 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.82 | 73.0 | 7.22e-01 | 100.0% | 96.9% |
| 5082288 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.82 | 74.0 | 6.91e-01 | 100.0% | 84.0% |
| 3840044 | 2004.1.1.995 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27254 | 0.82 | 70.0 | 7.11e-01 | 100.0% | 96.7% |
| 4045986 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.82 | 73.0 | 6.82e-01 | 100.0% | 92.0% |
| 3839830 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.81 | 72.0 | 6.78e-01 | 100.0% | 81.3% |
| 3965627 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.80 | 71.0 | 6.96e-01 | 100.0% | 98.5% |
| 4984945 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.80 | 71.0 | 7.22e-01 | 96.7% | 98.3% |
| 4931896 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.80 | 71.0 | 7.04e-01 | 100.0% | 95.4% |
| 4936540 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.79 | 71.0 | 7.01e-01 | 100.0% | 95.4% |
D3
high
residues 253-355
Domain cluster:
representative
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.87 | 81.0 | 7.53e-01 | 100.0% | 95.2% |
| 1jr3C02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.84 | 78.0 | 7.34e-01 | 100.0% | 95.1% |
| 2qw6D00 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.68 | 50.0 | 5.35e-01 | 100.0% | 93.0% |
| 3llkA02 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.65 | 45.0 | 4.04e-01 | 92.2% | 51.7% |
| 3q15B00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.64 | 35.0 | 2.38e-01 | 100.0% | 16.6% |
| 4jgiA01 | 1.10.1240.10 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › Methionine synthase domain | 0.58 | 41.0 | 4.46e-01 | 93.2% | 93.8% |
| 3iqtA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.55 | 42.0 | 4.06e-01 | 79.6% | 98.2% |
| 2gfpA00 | 1.20.1720.10 | Mainly Alpha › Up-down Bundle › Multidrug resistance protein D › Multidrug resistance protein D | 0.55 | 48.0 | 3.37e-01 | 100.0% | 85.6% |
| 1puoB00 | 1.20.920.50 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.55 | 44.0 | 4.04e-01 | 89.3% | 94.4% |
| 6y4rA01 | 1.25.40.590 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type IV / VI secretion system, DotU | 0.54 | 41.0 | 3.60e-01 | 80.6% | 54.5% |
| 8b70A01 | 1.20.1740.10 | Mainly Alpha › Up-down Bundle › Amino acid/polyamine transporter I › Amino acid/polyamine transporter I | 0.53 | 43.0 | 2.94e-01 | 89.3% | 59.3% |
| 1ldjA01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.53 | 46.0 | 4.32e-01 | 94.2% | 83.2% |
| 3nbxX03 | 1.20.58.1510 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.52 | 38.0 | 3.93e-01 | 83.5% | 78.2% |
| 4okmD00 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.51 | 44.0 | 3.25e-01 | 100.0% | 46.1% |
| 4ayoA00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.51 | 41.0 | 2.81e-01 | 91.3% | 48.6% |
| 2yksA02 | 1.20.58.390 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Neurotransmitter-gated ion-channel transmembrane domain | 0.51 | 41.0 | 3.98e-01 | 96.1% | 77.8% |
| 6xz3A01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.50 | 44.0 | 4.25e-01 | 100.0% | 84.6% |
| 2pbeA02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.50 | 35.0 | 3.36e-01 | 72.8% | 88.9% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965546 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.87 | 82.0 | 7.76e-01 | 100.0% | 94.2% |
| 3971248 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.86 | 81.0 | 7.76e-01 | 100.0% | 98.3% |
| 4683333 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.85 | 79.0 | 7.47e-01 | 100.0% | 97.5% |
| 3164843 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.84 | 79.0 | 6.91e-01 | 100.0% | 75.9% |
| 4388053 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.84 | 78.0 | 7.29e-01 | 100.0% | 88.8% |
| 3510536 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.83 | 78.0 | 7.38e-01 | 100.0% | 87.5% |
| 4256309 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.83 | 76.0 | 7.35e-01 | 100.0% | 100.0% |
| 4031429 | 138.1.1.3 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNApol3-delta_C | 0.82 | 75.0 | 7.23e-01 | 99.0% | 95.7% |
| 4660983 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.80 | 74.0 | 7.02e-01 | 100.0% | 91.7% |
| 5027339 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.77 | 68.0 | 6.92e-01 | 97.1% | 99.0% |
| 4175240 | 138.1.1.3 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNApol3-delta_C | 0.71 | 65.0 | 6.16e-01 | 100.0% | 89.2% |
| 4957321 | 3896.1.1.0 ↗ | alpha duplicates or obligate multimers › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase-related › Intramembrane CDP-DAG synthetase | 0.57 | 46.0 | 3.70e-01 | 89.3% | 45.1% |
| 3915784 | 5059.1.1.0 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter | 0.56 | 49.0 | 3.67e-01 | 100.0% | 66.5% |
| 5045194 | 1002.1.1.1 ↗ | alpha complex topology › Fluoride ion channel › Fluoride ion channel › Fluoride ion channel › CRCB | 0.56 | 40.0 | 3.83e-01 | 82.5% | 64.2% |
| 4451042 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.55 | 49.0 | 3.22e-01 | 100.0% | 88.4% |
| 3280418 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.55 | 49.0 | 3.58e-01 | 100.0% | 61.0% |
| 3787546 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.55 | 44.0 | 3.08e-01 | 86.4% | 73.0% |
| 3454589 | 109.46.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Helical domain in TOPLESS related protein 2 (TPR2) › Helical domain in TOPLESS related protein 2 (TPR2) | 0.55 | 37.0 | 3.50e-01 | 84.5% | 58.3% |
| 3782312 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.55 | 42.0 | 3.04e-01 | 82.5% | 71.9% |
| 3943261 | 5050.1.1.53 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MarC | 0.54 | 41.0 | 3.30e-01 | 81.6% | 92.1% |
| 5041443 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.53 | 48.0 | 3.49e-01 | 100.0% | 63.4% |
| 3450939 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.53 | 41.0 | 3.25e-01 | 80.6% | 65.0% |
| 4384912 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.52 | 39.0 | 2.97e-01 | 81.6% | 96.2% |
| 3901936 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.51 | 40.0 | 3.21e-01 | 84.5% | 80.9% |
| 3952682 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.51 | 41.0 | 3.19e-01 | 88.3% | 69.6% |
| 5001129 | 3542.1.1.1 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin | 0.51 | 42.0 | 3.03e-01 | 90.3% | 73.9% |
| 5050002 | 5050.1.1.10 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_2 | 0.51 | 37.0 | 2.78e-01 | 82.5% | 30.4% |
| 3513146 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 40.0 | 3.22e-01 | 85.4% | 83.3% |
| 5048286 | 601.7.1.34 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › DUF4129 | 0.51 | 41.0 | 4.00e-01 | 98.1% | 79.8% |
| 4994772 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.51 | 44.0 | 3.29e-01 | 100.0% | 61.8% |
| 3912101 | 604.6.1.1 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › GAT | 0.51 | 38.0 | 3.90e-01 | 88.3% | 81.0% |
| 4092649 | 5050.1.1.32 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn | 0.50 | 38.0 | 3.17e-01 | 82.5% | 72.5% |
| 5031064 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.50 | 38.0 | 3.90e-01 | 100.0% | 84.0% |