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term1_stool_scaffold_19_prodigal-single.1__X__X__00092

Bact-Vir

term1_stool_scaffold_19_prodigal-single.1__X__X__00092

Identity

Kingdom:
phage

Quality

80.0 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-183
PDB
Domain cluster: representative
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6y1xB01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.69 49.0 4.46e-01 73.1% 93.5%
1ep3A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.64 59.0 4.90e-01 100.0% 94.2%
3e74A02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.63 57.0 4.73e-01 98.9% 85.6%
4ur7A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.63 58.0 4.87e-01 99.5% 73.3%
3hurA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.63 55.0 5.12e-01 92.9% 91.9%
1gteB05 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 57.0 4.77e-01 98.9% 94.4%
3kzpA00 3.20.20.450 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › EAL domain 0.62 53.0 4.90e-01 90.7% 93.1%
3eb2A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.62 56.0 4.79e-01 97.3% 81.2%
1mehA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 56.0 4.52e-01 100.0% 83.9%
1kfwA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 55.0 4.39e-01 98.9% 95.7%
3fn9A03 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 56.0 4.73e-01 100.0% 81.8%
1dl3B00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 54.0 5.32e-01 100.0% 89.2%
3inpA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 56.0 5.29e-01 100.0% 99.1%
1telA02 3.20.20.110 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Ribulose bisphosphate carboxylase, large subunit, C-terminal domain 0.61 56.0 4.82e-01 100.0% 90.1%
3d0cB00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.61 53.0 4.52e-01 95.1% 94.0%
1nqkA00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.60 56.0 4.50e-01 100.0% 83.8%
1ta3A00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.60 55.0 4.81e-01 100.0% 90.1%
1mi3A00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.59 55.0 4.53e-01 100.0% 92.2%
3btnA02 3.20.20.10 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Alanine racemase 0.59 54.0 5.06e-01 100.0% 85.2%
4gieA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.59 54.0 4.65e-01 100.0% 89.2%
1i4nA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 53.0 4.80e-01 98.9% 83.7%
3go2A02 3.20.20.120 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain 0.59 54.0 4.71e-01 100.0% 77.6%
4n4pD00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.59 52.0 4.50e-01 97.3% 97.6%
4us5C00 3.20.20.30 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Luciferase-like domain 0.59 54.0 4.41e-01 100.0% 88.0%
4wfsA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 54.0 5.03e-01 100.0% 94.1%
5csrC00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.58 54.0 5.08e-01 100.0% 85.5%
2qhaA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.58 54.0 4.37e-01 100.0% 76.5%
1np6B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 34.0 3.83e-01 76.9% 75.7%
1o5xA00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.57 52.0 4.70e-01 98.9% 87.4%
4ijrA00 3.20.20.100 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain 0.57 52.0 4.29e-01 100.0% 73.2%
3o63A00 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 51.0 4.89e-01 100.0% 95.3%
2qr6A02 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.56 51.0 4.15e-01 100.0% 85.4%
3wg9A02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.55 32.0 3.64e-01 97.8% 73.6%
1jqxA01 3.20.20.70 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I 0.55 50.0 4.40e-01 100.0% 89.1%
3k9cB01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 32.0 3.71e-01 92.9% 85.5%
3kcnB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.50 33.0 3.73e-01 86.8% 86.9%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4996057 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.66 61.0 5.12e-01 100.0% 93.8%
4999002 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.66 61.0 4.88e-01 100.0% 79.3%
4228869 2002.1.1.122 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM,BATS 0.65 59.0 5.10e-01 98.9% 94.0%
3739997 2002.1.1.189 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRMT5_TIM 0.65 59.0 5.20e-01 98.9% 97.4%
3258555 2002.1.1.255 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_cc 0.63 56.0 4.97e-01 96.7% 92.5%
135604 2002.1.1.53 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Ala_racemase_N 0.63 55.0 5.01e-01 92.9% 86.5%
5021164 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.63 56.0 4.66e-01 95.1% 82.0%
5023628 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.63 57.0 5.16e-01 97.3% 97.1%
5023851 2002.1.1.66 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHquinase_I 0.62 57.0 5.38e-01 98.9% 100.0%
4989163 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.62 43.0 3.94e-01 70.3% 82.1%
4999481 2002.1.1.8 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Cellulase 0.62 57.0 4.86e-01 100.0% 92.1%
4983495 2002.1.1.236 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DHQS 0.62 52.0 5.38e-01 96.7% 95.9%
4614863 2002.1.1.28 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI 0.61 56.0 5.30e-01 100.0% 84.1%
4554871 2002.1.1.28 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI 0.61 55.0 5.21e-01 98.9% 96.8%
4174222 2002.1.1.28 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI 0.60 56.0 5.25e-01 100.0% 86.8%
2067692 2002.1.1.280 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IMPDH, NMO 0.60 56.0 4.69e-01 100.0% 92.9%
4391262 2002.1.1.13 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.60 55.0 4.54e-01 100.0% 88.6%
3973661 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.60 54.0 5.19e-01 98.9% 97.1%
5023012 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.59 50.0 4.79e-01 100.0% 78.1%
5013088 2002.1.1.224 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › SPASM 0.59 55.0 4.69e-01 100.0% 87.4%
5026936 2002.1.1.57 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › URO-D 0.59 54.0 4.43e-01 100.0% 96.7%
3515209 2002.1.1.13 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.59 54.0 4.38e-01 100.0% 87.4%
3189802 2002.1.1.432 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › IGPS, PRAI 0.58 54.0 3.83e-01 100.0% 42.1%
4030834 2002.1.1.28 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRAI 0.58 54.0 5.22e-01 100.0% 91.2%
1841240 2002.1.1.3 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM 0.58 54.0 5.11e-01 100.0% 87.0%
3691693 2002.1.1.16 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Bac_luciferase 0.58 53.0 4.20e-01 100.0% 83.4%
3970135 2002.1.1.0 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels 0.58 53.0 4.29e-01 100.0% 87.0%
5076525 2002.1.1.3 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM 0.58 53.0 4.93e-01 100.0% 84.7%
3216037 2002.1.1.83 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Amidohydro_1 0.58 53.0 4.03e-01 100.0% 81.8%
4630647 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.55 43.0 3.75e-01 81.3% 100.0%
3495297 2487.1.1.7 ↗ a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA 0.52 34.0 3.59e-01 96.7% 72.5%