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term1_stool_scaffold_19_prodigal-single.1__X__X__00096
Bact-Virterm1_stool_scaffold_19_prodigal-single.1__X__X__00096
Identity
- Kingdom:
- phage
Quality
88.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-176
Domain cluster:
rep: SRR1747065_scaffold_9_prodigal-single.1__X__X__00037__D2-138
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.58 | 34.0 | 4.15e-01 | 91.4% | 91.7% |
| 1pbyA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.55 | 31.0 | 3.86e-01 | 92.0% | 89.6% |
| 2w7qB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.55 | 47.0 | 4.71e-01 | 100.0% | 89.4% |
| 2lepA00 | 3.30.70.2350 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 18.0 | 2.99e-01 | 85.1% | 82.5% |
| 2rgnB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 25.0 | 2.99e-01 | 89.7% | 65.0% |
| 8es5A01 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 31.0 | 3.40e-01 | 85.1% | 73.9% |
| 5ee2A00 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.50 | 33.0 | 3.82e-01 | 94.9% | 93.4% |
| 6gbuD00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.50 | 21.0 | 3.15e-01 | 89.1% | 98.4% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995507 | 243.6.1.1 ↗ | a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › DUF1947 | 0.59 | 21.0 | 3.11e-01 | 86.9% | 70.7% |
| 2631766 | 3894.1.1.1 ↗ | beta meanders › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › O-GlcNAc transferase GtfA beta-meander domain › Asp1 | 0.55 | 23.0 | 2.71e-01 | 99.4% | 50.8% |
| 4879580 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.55 | 44.0 | 4.67e-01 | 97.1% | 96.1% |
| 3386839 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.54 | 42.0 | 4.40e-01 | 99.4% | 89.3% |
| 3964807 | 9.7.1.2 ↗ | beta barrels › Lipocalins/Streptavidin › Metalloprotease inhibitor › Metalloprotease inhibitor › PF28291 | 0.54 | 30.0 | 3.90e-01 | 89.1% | 98.9% |
| 3838812 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.54 | 42.0 | 4.45e-01 | 100.0% | 91.2% |
| 4115428 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.53 | 45.0 | 4.51e-01 | 100.0% | 89.4% |
| 3965943 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.53 | 46.0 | 4.47e-01 | 100.0% | 86.0% |
| 4133228 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.52 | 45.0 | 4.44e-01 | 100.0% | 88.6% |
| 4309203 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.52 | 44.0 | 4.43e-01 | 99.4% | 90.0% |
| 4285166 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.51 | 45.0 | 4.39e-01 | 100.0% | 86.5% |
| 4598953 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.51 | 24.0 | 2.92e-01 | 100.0% | 67.6% |
| 4123780 | 71.1.1.2 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA | 0.51 | 45.0 | 4.37e-01 | 100.0% | 87.6% |
| 3056895 | 71.1.1.7 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_2 | 0.50 | 44.0 | 4.30e-01 | 100.0% | 87.4% |
| 4965937 | 11.1.1.1419 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_arc | 0.50 | 27.0 | 3.57e-01 | 92.0% | 100.0% |
D2
high
residues 866-956
Domain cluster:
representative
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2chnB03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.62 | 52.0 | 4.20e-01 | 100.0% | 47.2% |
| 2ccyA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.60 | 50.0 | 4.51e-01 | 92.3% | 92.9% |
| 3k3oA02 | 1.20.58.1360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 44.0 | 4.60e-01 | 80.2% | 95.2% |
| 1sdiA00 | 1.10.3890.10 | Mainly Alpha › Orthogonal Bundle › YcfC-like › HflD-like | 0.58 | 51.0 | 3.94e-01 | 100.0% | 78.4% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.58 | 47.0 | 4.82e-01 | 100.0% | 94.3% |
| 2yinA03 | 1.20.58.740 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › DOCK DHR2 domain, lobe C | 0.56 | 46.0 | 4.11e-01 | 89.0% | 92.2% |
| 6bldA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.56 | 46.0 | 3.01e-01 | 91.2% | 57.5% |
| 2pvqA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 46.0 | 4.40e-01 | 97.8% | 79.2% |
| 2jexA01 | 1.10.287.30 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 | 0.55 | 46.0 | 4.53e-01 | 92.3% | 100.0% |
| 4hz4A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 44.0 | 4.16e-01 | 89.0% | 85.7% |
| 3nynA03 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.55 | 41.0 | 4.30e-01 | 85.7% | 92.6% |
| 1b48A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 48.0 | 4.54e-01 | 97.8% | 81.7% |
| 3cuxA02 | 1.20.1220.12 | Mainly Alpha › Up-down Bundle › Malate Synthase G; Chain: A; Domain 4 › Malate synthase, domain III | 0.54 | 46.0 | 4.21e-01 | 95.6% | 98.3% |
| 4pxoA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 47.0 | 4.19e-01 | 97.8% | 73.3% |
| 2hujA00 | 1.20.120.440 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YppE-like | 0.53 | 46.0 | 4.17e-01 | 95.6% | 76.8% |
| 3nf4A01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.53 | 39.0 | 3.68e-01 | 80.2% | 96.6% |
| 1bgcA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.53 | 44.0 | 3.70e-01 | 91.2% | 87.3% |
| 1qhhA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 33.0 | 2.82e-01 | 93.4% | 34.1% |
| 4ofzA01 | 1.20.58.1800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 46.0 | 4.33e-01 | 97.8% | 85.8% |
| 3ln6A01 | 3.30.590.20 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › | 0.52 | 46.0 | 2.99e-01 | 100.0% | 52.3% |
| 5xdcB01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.52 | 38.0 | 3.63e-01 | 79.1% | 100.0% |
| 6z0fA02 | 1.25.40.680 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Type VII secretion system EssB, C-terminal-like domain | 0.52 | 41.0 | 3.45e-01 | 91.2% | 48.2% |
| 4hwhE00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.51 | 43.0 | 4.44e-01 | 100.0% | 100.0% |
| 3hgtA00 | 3.40.50.12360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 42.0 | 3.05e-01 | 93.4% | 93.0% |
ECOD (24)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4946612 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.63 | 52.0 | 4.86e-01 | 91.2% | 93.9% |
| 3176286 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.62 | 52.0 | 3.97e-01 | 92.3% | 61.4% |
| 2992201 | 6171.1.1.1 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › JHD | 0.59 | 45.0 | 4.27e-01 | 82.4% | 76.4% |
| 4025845 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.59 | 44.0 | 3.37e-01 | 78.0% | 78.1% |
| 3228669 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.58 | 48.0 | 4.00e-01 | 92.3% | 72.7% |
| 3954514 | 604.5.1.61 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PF30641 | 0.58 | 51.0 | 5.00e-01 | 100.0% | 89.8% |
| 4343245 | 601.7.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN | 0.57 | 43.0 | 3.98e-01 | 82.4% | 79.2% |
| 3801950 | 3755.4.1.0 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain | 0.57 | 47.0 | 3.68e-01 | 91.2% | 42.0% |
| 3494082 | 109.4.1.464 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Exportin-T | 0.57 | 49.0 | 3.59e-01 | 96.7% | 48.1% |
| 3764093 | 6171.1.1.1 ↗ | alpha bundles › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › C-terminal helical domain in Jumonji domain-containing histone demethylases › JHD | 0.57 | 49.0 | 4.83e-01 | 100.0% | 89.5% |
| 4200315 | 604.6.1.59 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › PigN | 0.56 | 50.0 | 4.39e-01 | 100.0% | 69.6% |
| 3284612 | 604.10.1.10 ↗ | alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PF30641 | 0.56 | 49.0 | 4.81e-01 | 100.0% | 89.0% |
| 3272245 | 4121.1.1.1 ↗ | a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA | 0.56 | 50.0 | 3.59e-01 | 100.0% | 79.3% |
| 3768971 | 192.29.1.11 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › FerA | 0.55 | 45.0 | 4.30e-01 | 91.2% | 90.0% |
| 3533886 | 109.4.1.1635 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26779 | 0.55 | 45.0 | 3.94e-01 | 91.2% | 82.9% |
| 4943811 | 3883.1.1.0 ↗ | alpha bundles › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain › CDP-alcohol phosphotransferase helical bundle domain | 0.55 | 42.0 | 3.32e-01 | 96.7% | 37.6% |
| 3408177 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 44.0 | 3.84e-01 | 90.1% | 67.1% |
| 3888027 | 109.4.1.1635 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF26779 | 0.54 | 42.0 | 3.52e-01 | 86.8% | 79.4% |
| 3401878 | 3890.1.1.0 ↗ | alpha bundles › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins | 0.53 | 42.0 | 3.28e-01 | 87.9% | 75.8% |
| 3231735 | 106.1.1.1 ↗ | alpha arrays › Globin-like › Globin-like › Globin-like › Globin | 0.53 | 41.0 | 3.25e-01 | 82.4% | 61.6% |
| 4477679 | 604.27.1.1 ↗ | alpha bundles › Spectrin repeat-like › Triple-helical domain in insecticidal protein Cry1Ac › Triple-helical domain in insecticidal protein Cry1Ac › Endotoxin_C2 | 0.52 | 45.0 | 4.38e-01 | 100.0% | 84.8% |
| 3534307 | 601.1.1.98 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › PF27524 | 0.52 | 44.0 | 3.87e-01 | 96.7% | 66.9% |
| 3909447 | 601.1.2.63 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › HIP1R | 0.51 | 44.0 | 4.01e-01 | 98.9% | 73.6% |
| 1718749 | 109.4.1.1798 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ANAPC3, TPR_8, TPR_12, TPR_16, TTC7_N | 0.50 | 42.0 | 2.59e-01 | 97.8% | 25.0% |
D3
high
residues 979-1070
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4q7fA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.62 | 46.0 | 3.22e-01 | 78.3% | 61.3% |
| 4uhiA01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.59 | 42.0 | 2.69e-01 | 72.8% | 86.2% |
| 3czhA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.59 | 44.0 | 2.78e-01 | 77.2% | 84.1% |
| 3wuyA00 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.59 | 44.0 | 3.14e-01 | 80.4% | 59.9% |
| 8e83B01 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.59 | 41.0 | 2.65e-01 | 72.8% | 82.5% |
| 3ejbB01 | 3.30.43.20 | Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 2 › | 0.58 | 37.0 | 3.83e-01 | 84.8% | 69.9% |
| 1bvyB00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.57 | 41.0 | 2.65e-01 | 75.0% | 85.6% |
| 1s3lA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.57 | 42.0 | 3.52e-01 | 79.3% | 52.7% |
| 2q5iA03 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.56 | 37.0 | 3.46e-01 | 94.6% | 52.1% |
| 2gb7D00 | 3.40.91.80 | Alpha Beta › 3-Layer(aba) Sandwich › Restriction Endonuclease › | 0.56 | 42.0 | 3.00e-01 | 80.4% | 61.0% |
| 4axsA00 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.56 | 41.0 | 2.91e-01 | 77.2% | 90.4% |
| 2i4lA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.56 | 42.0 | 2.96e-01 | 83.7% | 65.9% |
| 6l4lA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.55 | 39.0 | 3.62e-01 | 73.9% | 99.1% |
| 3bfmA01 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.54 | 44.0 | 3.72e-01 | 93.5% | 88.3% |
| 2kknA00 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.54 | 41.0 | 3.52e-01 | 81.5% | 65.6% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.54 | 38.0 | 2.95e-01 | 73.9% | 50.2% |
| 5khaB01 | 3.60.110.10 | Alpha Beta › 4-Layer Sandwich › Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase › Carbon-nitrogen hydrolase | 0.52 | 38.0 | 2.88e-01 | 79.3% | 51.9% |
| 1htwA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 38.0 | 3.24e-01 | 77.2% | 72.8% |
| 2qb7B02 | 3.10.310.20 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › DHHA2 domain | 0.52 | 43.0 | 3.88e-01 | 96.7% | 95.7% |
| 2az4A01 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.52 | 37.0 | 2.77e-01 | 77.2% | 86.3% |
| 8dvhB01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.51 | 37.0 | 3.01e-01 | 76.1% | 89.4% |
| 2qsfA04 | 3.30.70.2460 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Rad4, beta-hairpin domain BHD3 | 0.51 | 34.0 | 3.78e-01 | 73.9% | 90.0% |
| 2edmA00 | 2.60.40.2770 | Mainly Beta › Sandwich › Immunoglobulin-like › WSSV envelope protein-like | 0.50 | 39.0 | 3.37e-01 | 87.0% | 67.1% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4056470 | 3585.1.1.1 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA_pol_IIIA_C | 0.78 | 54.0 | 5.73e-01 | 70.7% | 90.0% |
| 3263231 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.63 | 47.0 | 3.45e-01 | 79.3% | 70.8% |
| 4435772 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.59 | 51.0 | 4.67e-01 | 97.8% | 100.0% |
| 5064873 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.59 | 45.0 | 3.21e-01 | 81.5% | 66.7% |
| 5029060 | 246.3.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos | 0.58 | 43.0 | 3.34e-01 | 80.4% | 64.1% |
| 5009813 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.58 | 41.0 | 3.29e-01 | 76.1% | 67.2% |
| 3620960 | 2008.1.1.147 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PF29557 | 0.57 | 40.0 | 2.72e-01 | 72.8% | 66.0% |
| 5024737 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.57 | 41.0 | 3.46e-01 | 76.1% | 66.3% |
| 3703066 | 246.3.1.0 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like | 0.57 | 42.0 | 3.29e-01 | 80.4% | 77.3% |
| 4946846 | 2008.1.1.4 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Cas_Cas4 | 0.56 | 38.0 | 3.17e-01 | 70.7% | 43.0% |
| 5028297 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.56 | 46.0 | 4.26e-01 | 93.5% | 100.0% |
| 4175432 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.56 | 42.0 | 3.05e-01 | 82.6% | 64.6% |
| 4280402 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.55 | 47.0 | 4.20e-01 | 96.7% | 99.3% |
| 4041870 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.55 | 47.0 | 4.35e-01 | 95.7% | 100.0% |
| 4672117 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.55 | 46.0 | 4.22e-01 | 94.6% | 100.0% |
| 5080291 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.55 | 45.0 | 4.24e-01 | 91.3% | 100.0% |
| 4628908 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.55 | 46.0 | 4.22e-01 | 96.7% | 100.0% |
| 3453900 | 246.1.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Carbon-nitrogen hydrolase › Carbon-nitrogen hydrolase › CN_hydrolase | 0.55 | 43.0 | 3.01e-01 | 85.9% | 63.4% |
| 3582144 | 2008.2.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like | 0.55 | 39.0 | 3.71e-01 | 73.9% | 88.9% |
| 5029885 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.54 | 45.0 | 4.26e-01 | 95.7% | 100.0% |
| 3956851 | 3785.1.1.0 ↗ | a+b three layers › Suppressor of Fused, C-terminal domain › Suppressor of Fused, C-terminal domain › Suppressor of Fused, C-terminal domain | 0.54 | 40.0 | 3.69e-01 | 76.1% | 72.2% |
| 3954346 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.54 | 41.0 | 2.91e-01 | 80.4% | 96.9% |
| 4122987 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.54 | 45.0 | 4.24e-01 | 96.7% | 100.0% |
| 4948107 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.54 | 44.0 | 4.15e-01 | 94.6% | 100.0% |
| 4086119 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.54 | 45.0 | 4.20e-01 | 96.7% | 100.0% |
| 4183414 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.53 | 44.0 | 4.10e-01 | 93.5% | 99.2% |
| 3799509 | 225.1.1.7 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c_3 | 0.53 | 37.0 | 2.85e-01 | 70.7% | 77.1% |
| 5063520 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.53 | 45.0 | 4.29e-01 | 97.8% | 99.1% |
| 4217008 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.53 | 45.0 | 4.09e-01 | 97.8% | 98.5% |
| 4279209 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.53 | 45.0 | 4.15e-01 | 97.8% | 100.0% |
| 4298327 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.53 | 44.0 | 4.06e-01 | 95.7% | 100.0% |
| 4966826 | 2008.1.1.16 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat | 0.52 | 38.0 | 3.53e-01 | 75.0% | 72.2% |
| 4669968 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.52 | 41.0 | 3.86e-01 | 85.9% | 78.8% |
| 4449296 | 2004.1.1.84 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TsaE | 0.52 | 38.0 | 3.42e-01 | 78.3% | 81.5% |
| 3969876 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.52 | 37.0 | 2.78e-01 | 73.9% | 93.9% |
| 4411782 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.52 | 44.0 | 4.17e-01 | 96.7% | 100.0% |
D4
medium
residues 213-341
Domain cluster:
rep: PH2015_10_scaffold_0_prodigal-single.1__X__X__00129__D1-123
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01612.27 best | DNA_pol_A_exo1 | 26.3 | 8.60e-06 | 91.5% | 56.1% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1d8yA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.88 | 77.0 | 6.25e-01 | 96.1% | 53.5% |
| 7r0kB01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.83 | 71.0 | 5.55e-01 | 93.0% | 46.0% |
| 7sxqA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.81 | 68.0 | 5.32e-01 | 99.2% | 45.2% |
| 6vddD01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.81 | 60.0 | 5.31e-01 | 91.5% | 54.9% |
| 2e6mA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.80 | 67.0 | 5.86e-01 | 100.0% | 61.3% |
| 7pbkA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.79 | 59.0 | 4.82e-01 | 96.1% | 44.6% |
| 2a1rB01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.78 | 68.0 | 5.08e-01 | 91.5% | 67.8% |
| 2d5rA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.77 | 68.0 | 5.33e-01 | 93.0% | 73.0% |
| 1uocB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.74 | 67.0 | 5.31e-01 | 96.9% | 70.9% |
| 1j54A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.73 | 54.0 | 4.82e-01 | 76.0% | 70.7% |
| 1vk0A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.72 | 65.0 | 5.52e-01 | 98.4% | 61.5% |
| 1s5jA02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.72 | 53.0 | 4.56e-01 | 76.0% | 67.5% |
| 1noyB02 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.70 | 52.0 | 4.24e-01 | 76.0% | 69.9% |
| 7wrnA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.69 | 50.0 | 4.31e-01 | 76.0% | 67.2% |
| 3iayA03 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.69 | 51.0 | 4.28e-01 | 77.5% | 70.4% |
| 4okeA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.65 | 48.0 | 4.42e-01 | 76.0% | 74.4% |
| 2gx9A00 | 3.30.420.330 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Influenza virus non-structural protein, effector domain | 0.53 | 42.0 | 4.26e-01 | 90.7% | 86.5% |
| 4g4sP00 | 3.40.50.10900 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › PAC-like subunit | 0.51 | 36.0 | 3.13e-01 | 71.3% | 90.0% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4975018 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.90 | 68.0 | 5.74e-01 | 90.7% | 51.3% |
| 3163747 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.89 | 77.0 | 4.94e-01 | 96.1% | 23.5% |
| 3965745 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.89 | 79.0 | 5.88e-01 | 96.9% | 42.9% |
| 4165451 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.88 | 79.0 | 6.17e-01 | 100.0% | 49.0% |
| 3980678 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.87 | 79.0 | 5.56e-01 | 98.4% | 35.8% |
| 4233346 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.86 | 77.0 | 5.47e-01 | 100.0% | 36.1% |
| 2469642 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.86 | 66.0 | 5.44e-01 | 93.8% | 48.8% |
| 4995738 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.85 | 78.0 | 6.33e-01 | 96.9% | 56.4% |
| 4037090 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.84 | 75.0 | 6.12e-01 | 100.0% | 55.0% |
| 4821698 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.83 | 74.0 | 7.08e-01 | 96.1% | 82.9% |
| 3388110 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.82 | 75.0 | 5.39e-01 | 99.2% | 37.3% |
| 4029824 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.81 | 68.0 | 5.11e-01 | 99.2% | 40.0% |
| 4821686 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.81 | 69.0 | 7.31e-01 | 90.7% | 100.0% |
| 2579558 | 2484.1.1.96 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_polI_exo1 | 0.80 | 66.0 | 5.54e-01 | 100.0% | 55.0% |
| 3956762 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.79 | 67.0 | 5.58e-01 | 100.0% | 54.3% |
| 160349 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.79 | 68.0 | 5.87e-01 | 100.0% | 60.3% |
| 3803681 | 2484.1.1.45 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › CAF1 | 0.79 | 72.0 | 5.29e-01 | 96.9% | 67.9% |
| 3283743 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.79 | 66.0 | 4.78e-01 | 100.0% | 34.0% |
| 3266621 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.79 | 70.0 | 6.39e-01 | 93.8% | 81.8% |
| 3242153 | 2484.1.1.45 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › CAF1 | 0.79 | 72.0 | 5.05e-01 | 96.9% | 53.4% |
| 3990932 | 2484.1.1.45 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › CAF1 | 0.78 | 71.0 | 5.32e-01 | 96.9% | 69.3% |
| 3894412 | 2484.1.1.45 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › CAF1 | 0.78 | 68.0 | 4.88e-01 | 91.5% | 65.3% |
| 3261268 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.78 | 70.0 | 4.81e-01 | 93.8% | 31.7% |
| 2810987 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.78 | 59.0 | 5.00e-01 | 96.9% | 50.2% |
| 3407164 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.78 | 68.0 | 5.55e-01 | 96.1% | 53.6% |
| 3817603 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.77 | 73.0 | 4.82e-01 | 100.0% | 29.8% |
| 3685910 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.76 | 68.0 | 5.66e-01 | 100.0% | 57.2% |
| 3892440 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.76 | 67.0 | 5.32e-01 | 93.8% | 51.0% |
| 3580193 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.76 | 64.0 | 5.39e-01 | 96.9% | 56.1% |
| 3656569 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.75 | 64.0 | 5.35e-01 | 98.4% | 55.2% |
| 5000651 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.75 | 56.0 | 3.92e-01 | 78.3% | 69.0% |
| 3428835 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.74 | 67.0 | 5.38e-01 | 97.7% | 68.8% |
| 3528675 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.73 | 68.0 | 5.49e-01 | 100.0% | 56.2% |
| 3368406 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.73 | 66.0 | 5.67e-01 | 100.0% | 63.6% |
| 4603831 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.73 | 66.0 | 5.26e-01 | 100.0% | 51.0% |
| 4929239 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.73 | 54.0 | 3.97e-01 | 77.5% | 56.3% |
| 4672299 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.72 | 54.0 | 4.67e-01 | 77.5% | 64.9% |
| 3357118 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.72 | 64.0 | 5.46e-01 | 98.4% | 61.0% |
| 5016375 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.72 | 53.0 | 4.56e-01 | 76.0% | 60.0% |
| 3664145 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.71 | 65.0 | 5.51e-01 | 98.4% | 61.5% |
| 3961715 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.71 | 67.0 | 5.89e-01 | 100.0% | 82.8% |
| 4649118 | 2484.1.1.197 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1, DNA_pol_B_exo2 | 0.70 | 53.0 | 3.67e-01 | 78.3% | 69.1% |
| 4959338 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.69 | 52.0 | 4.52e-01 | 76.7% | 70.8% |
| 4022366 | 2484.1.1.161 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.69 | 51.0 | 3.23e-01 | 77.5% | 23.5% |
| 3463966 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 62.0 | 5.06e-01 | 98.4% | 65.5% |
| 3392123 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 51.0 | 4.24e-01 | 77.5% | 57.1% |
| 4932453 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.68 | 50.0 | 3.72e-01 | 77.5% | 50.6% |
| 5056578 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.68 | 51.0 | 3.85e-01 | 78.3% | 53.6% |
| 3482008 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.68 | 51.0 | 4.10e-01 | 77.5% | 63.0% |
| 5023018 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.67 | 50.0 | 4.25e-01 | 77.5% | 68.6% |
| 4504110 | 2484.1.1.197 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1, DNA_pol_B_exo2 | 0.67 | 51.0 | 3.48e-01 | 78.3% | 62.9% |
| 4505558 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.67 | 49.0 | 4.19e-01 | 76.7% | 64.9% |
| 3555725 | 2484.1.1.82 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_P_Exo | 0.66 | 57.0 | 3.95e-01 | 92.2% | 36.9% |
| 3766382 | 2484.1.1.82 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_P_Exo | 0.66 | 56.0 | 4.48e-01 | 91.5% | 58.8% |
| 5051934 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.66 | 56.0 | 4.59e-01 | 89.9% | 64.4% |
| 3742269 | 2484.1.1.90 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DEDDh_C | 0.66 | 49.0 | 4.21e-01 | 77.5% | 56.5% |
| 5035328 | 2484.1.1.34 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 | 0.65 | 48.0 | 3.93e-01 | 77.5% | 52.8% |
| 3951189 | 2484.1.1.68 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H_2 | 0.64 | 48.0 | 3.88e-01 | 77.5% | 47.8% |
| 3610983 | 2484.1.1.20 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 | 0.63 | 47.0 | 3.57e-01 | 76.7% | 39.7% |
| 4629102 | 2484.1.1.36 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_2 | 0.59 | 44.0 | 2.97e-01 | 76.7% | 28.3% |
| 3273761 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.51 | 37.0 | 2.89e-01 | 73.6% | 91.9% |
| 4971322 | 2484.3.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › Creatinase_N | 0.51 | 44.0 | 4.19e-01 | 95.3% | 92.3% |
| 4945376 | 2484.3.1.7 ↗ | mixed a+b and a/b › Ribonuclease H-like › Creatinase/prolidase N-terminal domain › Creatinase/prolidase N-terminal domain › Peptidase_M24 | 0.51 | 44.0 | 4.29e-01 | 96.1% | 95.2% |
| 3223923 | 7579.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S10 | 0.50 | 42.0 | 2.35e-01 | 92.2% | 92.6% |
D5
medium
residues 449-569
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6vddA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.88 | 79.0 | 8.10e-01 | 100.0% | 98.3% |
| 1bdp002 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.86 | 73.0 | 7.70e-01 | 100.0% | 99.1% |
| 1t7pA02 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.78 | 70.0 | 6.36e-01 | 95.0% | 100.0% |
| 2jexA01 | 1.10.287.30 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › E2 (early) protein, N terminal domain, subdomain 1 | 0.72 | 41.0 | 4.66e-01 | 93.4% | 71.9% |
| 1bbhA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.72 | 38.0 | 3.74e-01 | 95.0% | 47.3% |
| 7r0kA01 | 1.20.1060.10 | Mainly Alpha › Up-down Bundle › Taq DNA Polymerase; Chain T, domain 4 › Taq DNA Polymerase; Chain T, domain 4 | 0.71 | 58.0 | 6.08e-01 | 86.0% | 100.0% |
| 1l8dA00 | 1.10.287.510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.67 | 39.0 | 4.20e-01 | 95.9% | 68.0% |
| 1s35A02 | 1.20.58.60 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.62 | 41.0 | 4.27e-01 | 99.2% | 72.7% |
| 1n4kA02 | 1.25.10.30 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain | 0.61 | 35.0 | 3.26e-01 | 90.9% | 46.6% |
| 1qdbA02 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.59 | 34.0 | 3.22e-01 | 98.3% | 48.3% |
| 3dcfA02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 32.0 | 3.09e-01 | 90.9% | 44.4% |
| 4lmoA00 | 1.10.132.70 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › | 0.57 | 47.0 | 3.79e-01 | 90.9% | 97.6% |
| 1mn8D00 | 1.10.150.180 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Gamma-retroviral matrix domain | 0.54 | 36.0 | 3.92e-01 | 72.7% | 82.5% |
| 6srbA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 28.0 | 2.99e-01 | 90.9% | 53.2% |
| 1yowA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.53 | 42.0 | 3.45e-01 | 90.9% | 45.2% |
| 5af7B03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 45.0 | 4.21e-01 | 90.9% | 96.6% |
| 4ceiA03 | 6.10.250.2380 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.53 | 44.0 | 4.61e-01 | 89.3% | 97.3% |
| 3mk7A00 | 1.20.210.10 | Mainly Alpha › Up-down Bundle › Cytochrome C Oxidase; Chain A › Cytochrome c oxidase-like, subunit I domain | 0.53 | 46.0 | 3.05e-01 | 94.2% | 98.3% |
| 2dfkC01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.52 | 44.0 | 3.70e-01 | 94.2% | 76.9% |
| 7d3uC01 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 32.0 | 3.44e-01 | 92.6% | 72.0% |
| 1xjuA00 | 1.10.530.40 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.50 | 35.0 | 3.26e-01 | 71.1% | 98.1% |
| 1rp3G02 | 1.20.140.160 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain | 0.50 | 34.0 | 3.24e-01 | 86.8% | 58.5% |
ECOD (34)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3163747 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.92 | 83.0 | 5.29e-01 | 100.0% | 23.3% |
| 4848449 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.91 | 68.0 | 6.95e-01 | 87.6% | 79.5% |
| 4319500 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.90 | 82.0 | 5.28e-01 | 100.0% | 24.0% |
| 4061480 | 2484.1.1.58 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Taq-exonuc | 0.90 | 82.0 | 5.76e-01 | 100.0% | 34.8% |
| 3580212 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.90 | 69.0 | 7.74e-01 | 85.1% | 100.0% |
| 4339694 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.90 | 80.0 | 5.19e-01 | 100.0% | 24.3% |
| 4072515 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.89 | 81.0 | 5.36e-01 | 100.0% | 27.4% |
| 3964115 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.89 | 80.0 | 7.79e-01 | 97.5% | 86.9% |
| 1391185 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.89 | 79.0 | 6.72e-01 | 100.0% | 61.1% |
| 57665 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.88 | 80.0 | 6.90e-01 | 100.0% | 64.6% |
| 3274000 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.86 | 82.0 | 6.86e-01 | 100.0% | 91.1% |
| 3333792 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.85 | 81.0 | 6.97e-01 | 100.0% | 68.6% |
| 3595357 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.85 | 81.0 | 6.92e-01 | 100.0% | 72.2% |
| 3676005 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.85 | 80.0 | 5.35e-01 | 100.0% | 30.0% |
| 3616267 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.85 | 81.0 | 7.05e-01 | 100.0% | 74.1% |
| 3505184 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.83 | 80.0 | 6.10e-01 | 100.0% | 54.3% |
| 3555725 | 2484.1.1.82 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_P_Exo | 0.83 | 77.0 | 5.16e-01 | 100.0% | 28.7% |
| 2970331 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.82 | 78.0 | 6.74e-01 | 100.0% | 74.4% |
| 1503978 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.82 | 76.0 | 6.33e-01 | 100.0% | 61.0% |
| 3211911 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.81 | 77.0 | 6.81e-01 | 100.0% | 79.4% |
| 3483300 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.79 | 74.0 | 5.93e-01 | 99.2% | 70.0% |
| 3407160 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.78 | 72.0 | 6.59e-01 | 100.0% | 78.0% |
| 4027632 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.77 | 71.0 | 7.18e-01 | 95.9% | 96.7% |
| 2810986 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.76 | 71.0 | 6.03e-01 | 100.0% | 65.2% |
| 4032335 | 4970.1.1.0 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I | 0.73 | 68.0 | 5.74e-01 | 100.0% | 63.7% |
| 4024559 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.72 | 67.0 | 5.82e-01 | 100.0% | 71.3% |
| 3598489 | 4970.1.1.2 ↗ | alpha bundles › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › fingers domain in bacteriophage RB69-like DNA polymerase I › DNA_pol_A | 0.69 | 64.0 | 5.88e-01 | 100.0% | 78.7% |
| 3916642 | 192.2.1.56 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › KIF9 | 0.67 | 45.0 | 4.18e-01 | 95.9% | 55.3% |
| 3728304 | 604.12.1.24 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › DUF6604 | 0.59 | 37.0 | 4.03e-01 | 92.6% | 75.0% |
| 3990094 | 5086.1.1.94 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HB_LcnD | 0.55 | 40.0 | 3.56e-01 | 92.6% | 53.5% |
| 3499191 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.55 | 49.0 | 4.57e-01 | 98.3% | 76.7% |
| 3215086 | 188.1.1.1 ↗ | alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Hormone_recep | 0.55 | 42.0 | 3.38e-01 | 81.8% | 77.1% |
| 4352465 | 632.5.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylocoagulase › Staphylocoagulase › Coagulase | 0.51 | 38.0 | 3.63e-01 | 85.1% | 66.4% |
| 4025303 | 3860.1.1.155 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm › RIFIN | 0.50 | 38.0 | 3.13e-01 | 78.5% | 57.1% |
D6
medium
residues 625-751
Domain cluster:
rep: SRR1747045_scaffold_1_prodigal-single.1__X__X__00021__D31-141
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00476.27 best | DNA_pol_A | 69.9 | 2.80e-19 | 98.4% | 27.3% |