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term1_stool_scaffold_19_prodigal-single.1__X__X__00173
Bact-Virterm1_stool_scaffold_19_prodigal-single.1__X__X__00173
Identity
- Kingdom:
- phage
Quality
90.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-107
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 32.0 | 3.50e-01 | 75.0% | 59.2% |
| 4htgA03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.59 | 35.0 | 3.80e-01 | 83.7% | 68.4% |
| 6n9aB02 | 3.30.420.200 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.56 | 34.0 | 3.81e-01 | 82.6% | 79.7% |
| 2qkdA01 | 2.20.25.420 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain | 0.56 | 31.0 | 3.84e-01 | 72.8% | 100.0% |
| 2w9jA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.55 | 35.0 | 3.91e-01 | 93.5% | 84.5% |
| 4wyqB00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 33.0 | 3.55e-01 | 83.7% | 72.0% |
| 3fkaB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 28.0 | 2.65e-01 | 75.0% | 36.7% |
| 2imjD01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 41.0 | 3.56e-01 | 94.6% | 54.2% |
| 5cdhG00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.51 | 38.0 | 2.59e-01 | 78.3% | 96.6% |
| 5n1tA03 | 3.90.760.10 | Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain | 0.51 | 37.0 | 4.05e-01 | 82.6% | 98.6% |
| 8in8C01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.51 | 42.0 | 3.09e-01 | 92.4% | 46.2% |
| 6blkC00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.51 | 37.0 | 3.08e-01 | 76.1% | 86.1% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5022726 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.61 | 35.0 | 4.27e-01 | 81.5% | 100.0% |
| 3933100 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.61 | 31.0 | 3.55e-01 | 81.5% | 64.3% |
| 3514660 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.59 | 34.0 | 3.44e-01 | 83.7% | 56.7% |
| 5075465 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.59 | 31.0 | 3.68e-01 | 70.7% | 76.7% |
| 3519114 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.58 | 36.0 | 3.46e-01 | 87.0% | 52.7% |
| 3846927 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.58 | 33.0 | 3.27e-01 | 82.6% | 52.6% |
| 3669367 | 2484.1.1.165 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 40.0 | 2.73e-01 | 89.1% | 19.4% |
| 5054433 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.57 | 31.0 | 3.90e-01 | 76.1% | 96.0% |
| 3925738 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.57 | 33.0 | 3.18e-01 | 83.7% | 48.2% |
| 3788141 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.57 | 33.0 | 3.60e-01 | 82.6% | 69.3% |
| 3263815 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.54 | 35.0 | 3.57e-01 | 82.6% | 66.7% |
| 4386515 | 330.1.1.30 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › PF27148 | 0.54 | 32.0 | 3.64e-01 | 82.6% | 81.5% |
| 4011588 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.53 | 33.0 | 3.61e-01 | 82.6% | 77.3% |
| 5067760 | 283.1.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase | 0.53 | 29.0 | 3.02e-01 | 77.2% | 53.3% |
| 3327575 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.53 | 32.0 | 3.20e-01 | 82.6% | 56.0% |
| 3841070 | 330.1.1.5 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM | 0.52 | 34.0 | 3.37e-01 | 83.7% | 62.0% |
| 3728262 | 243.5.1.3 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region › DUF1965 | 0.51 | 38.0 | 3.38e-01 | 81.5% | 62.9% |