←Back to structures
term1_stool_scaffold_19_prodigal-single.1__X__X__00197
Bact-Virterm1_stool_scaffold_19_prodigal-single.1__X__X__00197
Identity
- Kingdom:
- phage
Quality
92.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-49
Domain cluster:
representative
CATH (70)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2xvlA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.79 | 59.0 | 3.70e-01 | 80.4% | 61.1% |
| 2kc8A00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.75 | 56.0 | 4.39e-01 | 80.4% | 57.9% |
| 1tfkA00 | 3.10.450.200 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.75 | 63.0 | 5.01e-01 | 93.5% | 57.4% |
| 3jbtA05 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.74 | 61.0 | 3.63e-01 | 93.5% | 27.0% |
| 4ci8A02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.74 | 59.0 | 3.55e-01 | 89.1% | 18.2% |
| 1r75A00 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.72 | 58.0 | 4.36e-01 | 89.1% | 75.5% |
| 1mdaH00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.71 | 61.0 | 3.56e-01 | 95.7% | 13.0% |
| 2bjfA01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.71 | 50.0 | 3.04e-01 | 76.1% | 91.2% |
| 4ntqA00 | 3.10.380.20 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain | 0.71 | 55.0 | 4.63e-01 | 82.6% | 53.9% |
| 5hkeA01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.71 | 50.0 | 3.05e-01 | 76.1% | 93.8% |
| 3k2yA00 | 3.30.70.2330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.71 | 54.0 | 4.13e-01 | 82.6% | 68.0% |
| 2yadA00 | 3.30.390.150 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › | 0.71 | 57.0 | 4.85e-01 | 91.3% | 58.4% |
| 2dg1C00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.71 | 60.0 | 3.62e-01 | 95.7% | 26.9% |
| 1q7fB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.69 | 60.0 | 3.72e-01 | 100.0% | 79.1% |
| 3dsmA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 59.0 | 3.59e-01 | 100.0% | 82.9% |
| 2fe0A01 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.68 | 53.0 | 4.05e-01 | 87.0% | 81.3% |
| 3u4yA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.68 | 58.0 | 3.52e-01 | 100.0% | 86.5% |
| 4ld1A00 | 2.60.450.20 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › | 0.68 | 48.0 | 3.33e-01 | 76.1% | 22.3% |
| 1zxuA00 | 2.40.160.200 | Mainly Beta › Beta Barrel › Porin › LURP1-related | 0.67 | 52.0 | 3.61e-01 | 87.0% | 43.2% |
| 2hezA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.67 | 47.0 | 2.88e-01 | 76.1% | 91.4% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.66 | 46.0 | 2.97e-01 | 76.1% | 45.0% |
| 7x36A01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.66 | 56.0 | 3.44e-01 | 100.0% | 84.0% |
| 4hdoA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 50.0 | 4.05e-01 | 84.8% | 67.4% |
| 8f5pE01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 58.0 | 3.40e-01 | 100.0% | 90.6% |
| 1fohA03 | 3.40.30.20 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Phenol hydroxylase, C-terminal dimerisation domain | 0.66 | 49.0 | 3.17e-01 | 80.4% | 70.3% |
| 1fwxA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.66 | 56.0 | 3.25e-01 | 100.0% | 77.3% |
| 7b2sA01 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.65 | 54.0 | 3.79e-01 | 95.7% | 74.8% |
| 4qt6A00 | 2.60.120.920 | Mainly Beta › Sandwich › Jelly Rolls › SPRY domain | 0.65 | 56.0 | 3.89e-01 | 100.0% | 74.8% |
| 2p4oA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.65 | 56.0 | 3.44e-01 | 100.0% | 77.1% |
| 1ijqA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.65 | 55.0 | 3.51e-01 | 100.0% | 68.9% |
| 1npeA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.65 | 55.0 | 3.49e-01 | 100.0% | 66.2% |
| 3s2kB01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.65 | 54.0 | 3.39e-01 | 100.0% | 59.1% |
| 1rwiA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.64 | 55.0 | 3.49e-01 | 100.0% | 66.4% |
| 2ogqA01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.64 | 54.0 | 4.05e-01 | 100.0% | 49.2% |
| 3i7dA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 47.0 | 3.27e-01 | 80.4% | 58.0% |
| 3jb9L00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.64 | 53.0 | 3.29e-01 | 100.0% | 87.7% |
| 2wc7A02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.64 | 45.0 | 3.81e-01 | 76.1% | 89.9% |
| 4g7nA02 | 3.30.1120.130 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.63 | 53.0 | 4.30e-01 | 100.0% | 93.8% |
| 5xpyA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 48.0 | 3.78e-01 | 84.8% | 64.8% |
| 4tpsA00 | 3.30.310.250 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Sporulation inhibitor of replication protein SirA | 0.62 | 42.0 | 3.08e-01 | 71.7% | 25.0% |
| 6qm7A00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.62 | 53.0 | 3.39e-01 | 100.0% | 65.2% |
| 3hjhA02 | 3.30.2060.10 | Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain | 0.62 | 51.0 | 4.24e-01 | 95.7% | 53.5% |
| 4z9mB02 | 3.30.590.10 | Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain | 0.62 | 43.0 | 2.86e-01 | 76.1% | 35.4% |
| 5h4eA02 | 3.30.920.50 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Beta-1,3-glucanase, C-terminal domain | 0.62 | 50.0 | 3.86e-01 | 97.8% | 64.7% |
| 1n7oA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.61 | 46.0 | 3.88e-01 | 84.8% | 65.9% |
| 2dkhA03 | 3.40.30.20 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Phenol hydroxylase, C-terminal dimerisation domain | 0.61 | 49.0 | 3.15e-01 | 89.1% | 71.8% |
| 3zuaA01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 49.0 | 3.74e-01 | 100.0% | 43.5% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.61 | 50.0 | 3.86e-01 | 100.0% | 54.8% |
| 6jwfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.60 | 48.0 | 2.91e-01 | 100.0% | 91.0% |
| 1evlA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.60 | 45.0 | 3.50e-01 | 84.8% | 76.8% |
| 2zkmX01 | 2.30.29.240 | Mainly Beta › Roll › PH-domain like › | 0.60 | 48.0 | 3.25e-01 | 97.8% | 52.9% |
| 2b7jB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 45.0 | 3.04e-01 | 80.4% | 79.6% |
| 2rrfA00 | 2.30.29.160 | Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal | 0.59 | 48.0 | 3.50e-01 | 97.8% | 70.9% |
| 4hwtA02 | 3.40.50.800 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain | 0.58 | 44.0 | 3.46e-01 | 84.8% | 79.1% |
| 3cjxA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.57 | 45.0 | 3.39e-01 | 100.0% | 92.7% |
| 2vszB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 47.0 | 3.65e-01 | 100.0% | 88.0% |
| 1b7tA02 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.57 | 44.0 | 4.32e-01 | 93.5% | 92.3% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 43.0 | 3.99e-01 | 95.7% | 82.4% |
| 1j8bA00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.55 | 43.0 | 3.42e-01 | 84.8% | 58.7% |
| 6imjA01 | 3.30.470.30 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme | 0.55 | 42.0 | 2.90e-01 | 87.0% | 43.1% |
| 4wfsA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.55 | 37.0 | 2.46e-01 | 71.7% | 26.6% |
| 2vtfA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 39.0 | 3.27e-01 | 80.4% | 93.4% |
| 2pt7C01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 48.0 | 3.65e-01 | 100.0% | 82.1% |
| 6y48D01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.54 | 40.0 | 2.54e-01 | 89.1% | 51.7% |
| 2x8nA01 | 3.30.2020.40 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 | 0.52 | 45.0 | 3.49e-01 | 100.0% | 45.4% |
| 1wfiA00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 38.0 | 2.86e-01 | 82.6% | 31.3% |
| 3f42A00 | 3.30.1310.10 | Alpha Beta › 2-Layer Sandwich › Ybab; Chain: A; › Nucleoid-associated protein YbaB-like domain | 0.52 | 44.0 | 3.52e-01 | 97.8% | 54.8% |
| 7k7jA02 | 2.60.40.1770 | Mainly Beta › Sandwich › Immunoglobulin-like › ephrin a2 ectodomain | 0.52 | 38.0 | 3.53e-01 | 82.6% | 82.3% |
| 1vpkA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.51 | 38.0 | 2.93e-01 | 89.1% | 71.9% |
| 3luuA00 | 3.30.2020.30 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › | 0.51 | 37.0 | 3.23e-01 | 91.3% | 88.8% |
ECOD (89)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3259296 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.81 | 58.0 | 3.99e-01 | 76.1% | 23.3% |
| 3077250 | 234.3.1.0 ↗ | a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain | 0.80 | 64.0 | 5.16e-01 | 89.1% | 52.3% |
| 4845616 | 3735.1.1.14 ↗ | beta meanders › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › Rearrangement hotspot (RHS) repeats protein › TEN_YD-shell | 0.76 | 53.0 | 5.46e-01 | 73.9% | 81.8% |
| 5017944 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.75 | 66.0 | 3.97e-01 | 100.0% | 15.2% |
| 6280 | 234.3.1.1 ↗ | a+b two layers › Microbial ribonucleases-like › Colicin D nuclease domain › Colicin D nuclease domain › Colicin_D | 0.75 | 63.0 | 4.81e-01 | 93.5% | 50.5% |
| 3260249 | 325.1.7.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › GCV_H | 0.75 | 64.0 | 4.70e-01 | 97.8% | 90.4% |
| 3566475 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.75 | 62.0 | 3.76e-01 | 91.3% | 20.0% |
| 4573580 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.75 | 62.0 | 3.77e-01 | 91.3% | 20.4% |
| 5048444 | 5.1.4.143 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF6454 | 0.74 | 64.0 | 3.99e-01 | 95.7% | 38.0% |
| 3786288 | 3257.1.1.1 ↗ | a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N | 0.74 | 66.0 | 4.40e-01 | 100.0% | 26.9% |
| 3953047 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.73 | 60.0 | 3.65e-01 | 93.5% | 27.1% |
| 4994722 | 5.1.11.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed | 0.73 | 66.0 | 3.82e-01 | 100.0% | 60.5% |
| 3450480 | 5.1.4.297 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 | 0.72 | 58.0 | 3.66e-01 | 91.3% | 22.0% |
| 3519730 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.72 | 61.0 | 3.66e-01 | 95.7% | 30.4% |
| 3376278 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.72 | 64.0 | 3.83e-01 | 100.0% | 44.7% |
| 3417431 | 5.1.4.297 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 | 0.72 | 59.0 | 3.38e-01 | 91.3% | 13.0% |
| 3672647 | 5.1.4.297 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 | 0.72 | 59.0 | 3.43e-01 | 93.5% | 19.5% |
| 3960750 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.72 | 58.0 | 4.32e-01 | 91.3% | 49.2% |
| 3572586 | 5.1.3.140 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL, DUF5128 | 0.71 | 62.0 | 3.76e-01 | 100.0% | 75.4% |
| None | — | 0.71 | 62.0 | 3.59e-01 | 100.0% | 54.1% | |
| 3809547 | 5.1.4.297 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 | 0.71 | 58.0 | 3.46e-01 | 93.5% | 24.2% |
| 3500002 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.71 | 60.0 | 3.67e-01 | 95.7% | 31.2% |
| 4628779 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.71 | 62.0 | 3.46e-01 | 100.0% | 39.1% |
| 4956008 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.71 | 58.0 | 3.41e-01 | 91.3% | 13.2% |
| 3917075 | 5.1.3.140 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL, DUF5128 | 0.71 | 61.0 | 3.73e-01 | 100.0% | 80.6% |
| 4003936 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.71 | 62.0 | 3.86e-01 | 100.0% | 83.4% |
| 4868007 | 5.1.2.4 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › NHL | 0.70 | 60.0 | 3.74e-01 | 95.7% | 36.2% |
| 3264242 | 5.1.4.297 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 | 0.70 | 58.0 | 3.39e-01 | 93.5% | 22.3% |
| 5024619 | 5.1.4.64 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › YNCE | 0.70 | 62.0 | 3.45e-01 | 100.0% | 26.3% |
| None | — | 0.70 | 59.0 | 3.57e-01 | 95.7% | 27.5% | |
| 4161413 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.70 | 59.0 | 3.57e-01 | 95.7% | 27.5% |
| 3797457 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.70 | 61.0 | 3.73e-01 | 100.0% | 75.6% |
| 5034716 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.70 | 61.0 | 3.78e-01 | 100.0% | 78.5% |
| 3453961 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.70 | 60.0 | 3.57e-01 | 100.0% | 86.6% |
| 3627390 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.70 | 60.0 | 3.69e-01 | 100.0% | 72.4% |
| 3229434 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.69 | 59.0 | 3.56e-01 | 95.7% | 29.7% |
| 4976401 | 230.1.1.3 ↗ | a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS | 0.69 | 51.0 | 3.54e-01 | 84.8% | 23.9% |
| 3283531 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.69 | 59.0 | 3.67e-01 | 95.7% | 27.8% |
| 3937996 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.69 | 60.0 | 3.66e-01 | 97.8% | 20.7% |
| 3917456 | 5.1.5.93 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N | 0.69 | 56.0 | 3.28e-01 | 93.5% | 46.6% |
| 3496419 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 57.0 | 3.12e-01 | 95.7% | 5.9% |
| 3502898 | 5.1.3.140 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL, DUF5128 | 0.68 | 59.0 | 3.62e-01 | 100.0% | 46.7% |
| 3193273 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 56.0 | 3.18e-01 | 95.7% | 15.4% |
| 4029991 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.68 | 55.0 | 3.26e-01 | 93.5% | 29.7% |
| 4002675 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.68 | 57.0 | 3.54e-01 | 95.7% | 33.0% |
| 3781621 | 5.1.4.19 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Coatomer_WDAD | 0.68 | 56.0 | 3.49e-01 | 95.7% | 29.1% |
| 3888357 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.68 | 58.0 | 3.56e-01 | 100.0% | 75.2% |
| 145091 | 5.1.4.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Lactonase | 0.68 | 58.0 | 3.52e-01 | 100.0% | 86.5% |
| 3244937 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.67 | 59.0 | 3.68e-01 | 100.0% | 86.2% |
| 4100064 | 5.1.3.192 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF5050 | 0.67 | 57.0 | 3.57e-01 | 100.0% | 78.5% |
| 3414341 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.67 | 55.0 | 3.44e-01 | 93.5% | 18.5% |
| 4961310 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.67 | 56.0 | 3.50e-01 | 100.0% | 75.9% |
| 3783703 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.67 | 56.0 | 3.36e-01 | 95.7% | 29.3% |
| 3515664 | 5.1.4.34 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 | 0.67 | 58.0 | 3.27e-01 | 100.0% | 73.0% |
| 3177260 | 292.2.1.1 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › POLO_box | 0.66 | 56.0 | 3.61e-01 | 100.0% | 25.5% |
| 3419955 | 5.1.3.207 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › WD40, NBCH_WD40 | 0.66 | 54.0 | 3.24e-01 | 93.5% | 16.0% |
| 3666904 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.66 | 57.0 | 3.44e-01 | 100.0% | 45.5% |
| 3705889 | 5.1.4.255 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2, WD40_RLD | 0.66 | 54.0 | 3.23e-01 | 93.5% | 31.3% |
| 4951111 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.66 | 57.0 | 3.43e-01 | 100.0% | 85.5% |
| 4996489 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.66 | 56.0 | 3.42e-01 | 100.0% | 85.2% |
| 3441598 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.65 | 55.0 | 3.40e-01 | 100.0% | 46.6% |
| 3967100 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.65 | 47.0 | 2.94e-01 | 76.1% | 52.9% |
| 3536979 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.65 | 57.0 | 3.49e-01 | 100.0% | 83.7% |
| 3228392 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.65 | 56.0 | 3.47e-01 | 100.0% | 63.2% |
| 3279701 | 319.1.1.16 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › PF26059 | 0.65 | 51.0 | 4.31e-01 | 89.1% | 62.5% |
| 3781209 | 4.1.1.308 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31073 | 0.64 | 54.0 | 4.30e-01 | 100.0% | 66.0% |
| 3419193 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.64 | 53.0 | 3.47e-01 | 95.7% | 29.5% |
| 3660624 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.64 | 53.0 | 3.19e-01 | 100.0% | 81.1% |
| 3282767 | 2485.1.1.30 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Phe_hydrox_dim | 0.63 | 48.0 | 3.09e-01 | 82.6% | 66.4% |
| 5010183 | 5.1.3.278 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29948 | 0.63 | 52.0 | 3.17e-01 | 95.7% | 51.2% |
| 3932184 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.63 | 51.0 | 3.22e-01 | 100.0% | 66.8% |
| 1320692 | 331.21.1.1 ↗ | a+b two layers › TBP-like › Sporulation inhibitor of replication protein SirA › Sporulation inhibitor of replication protein SirA › SirA | 0.62 | 42.0 | 3.08e-01 | 71.7% | 25.0% |
| 4387556 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.62 | 48.0 | 3.78e-01 | 87.0% | 71.7% |
| 210920 | 284.2.1.0 ↗ | a+b two layers › FKBP-like › Chitinase insertion domain › Chitinase insertion domain | 0.61 | 42.0 | 3.51e-01 | 73.9% | 81.6% |
| 3356611 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.59 | 45.0 | 4.34e-01 | 89.1% | 74.5% |
| 4039215 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.59 | 44.0 | 3.64e-01 | 84.8% | 90.5% |
| 3824752 | 5.3.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-Prism II › beta-Prism II › S_locus_glycop | 0.58 | 47.0 | 3.45e-01 | 91.3% | 69.2% |
| 4957284 | 219.1.1.153 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › BtrH_N | 0.58 | 45.0 | 3.19e-01 | 95.7% | 45.7% |
| 3962103 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.58 | 45.0 | 3.43e-01 | 84.8% | 51.4% |
| 4117037 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.58 | 43.0 | 3.38e-01 | 84.8% | 74.8% |
| 3487125 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.58 | 45.0 | 3.66e-01 | 89.1% | 76.7% |
| 4396346 | 7502.1.1.1 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon | 0.57 | 44.0 | 3.44e-01 | 80.4% | 77.1% |
| 4623460 | 4205.1.1.1 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › Syd | 0.55 | 42.0 | 2.92e-01 | 89.1% | 24.3% |
| 4886250 | 4205.1.1.1 ↗ | a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like › Syd | 0.55 | 41.0 | 2.87e-01 | 89.1% | 25.0% |
| 3800251 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 42.0 | 3.68e-01 | 87.0% | 66.7% |
| 4068261 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.53 | 45.0 | 4.09e-01 | 97.8% | 81.5% |
| 3270892 | 2002.1.1.56 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Dus | 0.53 | 39.0 | 2.38e-01 | 82.6% | 32.9% |
| 3952816 | 245.2.1.2 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › DUF2710 | 0.52 | 44.0 | 3.96e-01 | 97.8% | 80.0% |
| 4236240 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.50 | 43.0 | 3.42e-01 | 97.8% | 53.7% |
D2
high
residues 52-119
Domain cluster:
representative
CATH (57)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7dl8C01 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.71 | 48.0 | 4.39e-01 | 100.0% | 53.9% |
| 3fssA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.70 | 45.0 | 4.23e-01 | 100.0% | 52.3% |
| 5agvA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.69 | 45.0 | 3.58e-01 | 100.0% | 34.4% |
| 3dfeA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 44.0 | 4.17e-01 | 100.0% | 53.7% |
| 5agvA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.69 | 42.0 | 3.48e-01 | 100.0% | 33.9% |
| 5w7zA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.68 | 42.0 | 3.55e-01 | 100.0% | 37.2% |
| 4trtA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.67 | 41.0 | 3.38e-01 | 100.0% | 34.5% |
| 3t0pA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.67 | 40.0 | 2.92e-01 | 89.7% | 21.2% |
| 2n3lA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.66 | 44.0 | 4.08e-01 | 100.0% | 52.8% |
| 3ibwA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 44.0 | 4.26e-01 | 100.0% | 59.5% |
| 1ge8A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.66 | 38.0 | 2.64e-01 | 89.7% | 16.0% |
| 3c4sA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.66 | 37.0 | 4.00e-01 | 94.1% | 64.9% |
| 6f95A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 49.0 | 3.87e-01 | 82.4% | 100.0% |
| 1vpkA01 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.65 | 41.0 | 3.39e-01 | 100.0% | 35.8% |
| 5fiiB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 45.0 | 4.33e-01 | 100.0% | 64.1% |
| 4m7xA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.64 | 53.0 | 4.87e-01 | 94.1% | 89.0% |
| 3fvcA03 | 2.30.29.100 | Mainly Beta › Roll › PH-domain like › | 0.63 | 55.0 | 4.77e-01 | 100.0% | 92.7% |
| 1p9rA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.63 | 56.0 | 4.76e-01 | 100.0% | 74.8% |
| 1e8oA00 | 3.30.720.10 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Signal recognition particle alu RNA binding heterodimer, srp9/1 | 0.63 | 43.0 | 4.19e-01 | 70.6% | 67.6% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.63 | 43.0 | 4.10e-01 | 100.0% | 59.8% |
| 1p6pA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.63 | 46.0 | 3.76e-01 | 77.9% | 72.0% |
| 2wnyA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.62 | 43.0 | 3.45e-01 | 100.0% | 36.5% |
| 1vq8S00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 41.0 | 3.92e-01 | 100.0% | 59.3% |
| 4rkiA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.61 | 41.0 | 3.35e-01 | 100.0% | 36.9% |
| 2go8A01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 40.0 | 3.96e-01 | 100.0% | 63.5% |
| 1ykdB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.60 | 50.0 | 3.81e-01 | 100.0% | 56.7% |
| 1dglA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.60 | 52.0 | 3.64e-01 | 100.0% | 63.7% |
| 4trtA03 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.59 | 42.0 | 3.49e-01 | 100.0% | 42.5% |
| 2bc4A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 46.0 | 4.00e-01 | 86.8% | 63.3% |
| 5wceA02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.58 | 39.0 | 3.21e-01 | 100.0% | 37.2% |
| 3b5iB01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 44.0 | 3.08e-01 | 100.0% | 23.7% |
| 4pg4B03 | 3.30.70.3100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 39.0 | 3.83e-01 | 100.0% | 64.0% |
| 4csbA00 | 2.40.128.480 | Mainly Beta › Beta Barrel › Lipocalin › Rhodococcus equi virulence-associated protein | 0.57 | 48.0 | 4.08e-01 | 92.6% | 85.0% |
| 2q0oA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.57 | 50.0 | 3.78e-01 | 100.0% | 57.7% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.57 | 41.0 | 2.79e-01 | 100.0% | 20.4% |
| 1sxjH02 | 3.10.150.10 | Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 | 0.56 | 43.0 | 3.46e-01 | 100.0% | 43.0% |
| 3gtyX02 | 3.10.50.30 | Alpha Beta › Roll › Chitinase A; domain 3 › Transcription elongation factor, GreA/GreB, C-terminal domain | 0.56 | 49.0 | 4.51e-01 | 100.0% | 75.0% |
| 3m4pA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 41.0 | 3.56e-01 | 79.4% | 81.2% |
| 3fehA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 46.0 | 3.89e-01 | 95.6% | 59.7% |
| 3cm1A00 | 2.30.31.20 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB | 0.55 | 42.0 | 3.52e-01 | 88.2% | 68.4% |
| 1t6lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.55 | 41.0 | 2.78e-01 | 98.5% | 21.7% |
| 3ifvC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.55 | 39.0 | 2.67e-01 | 100.0% | 20.8% |
| 4ebrA00 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.54 | 41.0 | 3.18e-01 | 82.4% | 46.5% |
| 1h10A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.54 | 38.0 | 3.33e-01 | 100.0% | 45.3% |
| 2b5iB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 44.0 | 3.96e-01 | 89.7% | 100.0% |
| 2yd1A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 38.0 | 3.35e-01 | 100.0% | 51.5% |
| 1xkiA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.53 | 41.0 | 3.45e-01 | 88.2% | 65.6% |
| 1azpA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.53 | 35.0 | 3.61e-01 | 83.8% | 72.7% |
| 3fqmA01 | 2.20.25.210 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Hepatitis C NS5A, domain 1B | 0.52 | 36.0 | 3.81e-01 | 97.1% | 80.3% |
| 1mknA00 | 2.20.60.10 | Mainly Beta › Single Sheet › Heparin-binding Growth Factor, Midkine; Chain A › Pleiotrophin/Midkine, N-terminal domain | 0.52 | 30.0 | 3.15e-01 | 86.8% | 61.0% |
| 1qs8A01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.52 | 44.0 | 3.35e-01 | 98.5% | 97.7% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.51 | 41.0 | 3.56e-01 | 100.0% | 54.2% |
| 2bolA03 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 46.0 | 4.17e-01 | 100.0% | 82.8% |
| 3p91A00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.51 | 45.0 | 3.07e-01 | 100.0% | 90.2% |
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.51 | 40.0 | 3.49e-01 | 98.5% | 56.3% |
| 4l2iB00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 41.0 | 2.87e-01 | 95.6% | 44.9% |
| 3sreA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 39.0 | 2.62e-01 | 91.2% | 85.1% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3230359 | 207.1.1.66 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DUF3557 | 0.74 | 55.0 | 3.54e-01 | 77.9% | 20.0% |
| 3782651 | 211.1.1.0 ↗ | a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase | 0.74 | 64.0 | 6.08e-01 | 100.0% | 80.0% |
| 426904 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.70 | 44.0 | 3.58e-01 | 100.0% | 35.0% |
| 2141304 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.68 | 43.0 | 3.49e-01 | 100.0% | 33.6% |
| 5014879 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.68 | 44.0 | 3.69e-01 | 100.0% | 40.0% |
| 3015239 | 227.1.1.8 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_3 | 0.66 | 42.0 | 3.47e-01 | 100.0% | 36.1% |
| 3609138 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.66 | 45.0 | 3.82e-01 | 100.0% | 43.6% |
| 3287602 | 886.1.1.3 ↗ | a+b duplicates or obligate multimers › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Probable bacterial effector-binding domain › Cass2 | 0.66 | 49.0 | 3.87e-01 | 100.0% | 38.2% |
| 143428 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.65 | 43.0 | 3.57e-01 | 100.0% | 38.3% |
| 3839477 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.65 | 44.0 | 3.64e-01 | 100.0% | 38.4% |
| 3926365 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.65 | 46.0 | 2.81e-01 | 75.0% | 21.3% |
| 2522057 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.65 | 40.0 | 3.32e-01 | 100.0% | 34.1% |
| 3931122 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.64 | 43.0 | 3.85e-01 | 70.6% | 49.5% |
| 3989004 | 2004.1.1.42 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE | 0.64 | 56.0 | 3.66e-01 | 100.0% | 29.0% |
| 4047098 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.63 | 41.0 | 3.43e-01 | 100.0% | 37.5% |
| 4941490 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.63 | 40.0 | 3.18e-01 | 100.0% | 32.6% |
| 5074321 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.63 | 43.0 | 3.50e-01 | 100.0% | 38.4% |
| 4860663 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.63 | 39.0 | 3.12e-01 | 100.0% | 30.7% |
| 3166028 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.62 | 49.0 | 4.46e-01 | 88.2% | 78.9% |
| 3598260 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.62 | 39.0 | 3.27e-01 | 89.7% | 35.2% |
| 3015240 | 227.1.1.7 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta_2 | 0.62 | 39.0 | 3.28e-01 | 100.0% | 35.2% |
| 4059466 | 227.1.1.3 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › DNA_pol3_beta | 0.62 | 39.0 | 3.78e-01 | 100.0% | 55.1% |
| 3513343 | 304.109.1.2 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23,Ribosomal_L23eN | 0.62 | 42.0 | 3.48e-01 | 100.0% | 40.0% |
| 4055466 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.62 | 44.0 | 3.58e-01 | 100.0% | 41.1% |
| 3164102 | 252.2.1.0 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like | 0.62 | 39.0 | 4.61e-01 | 98.5% | 97.8% |
| 3307519 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.61 | 53.0 | 5.27e-01 | 100.0% | 98.6% |
| 3593122 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.61 | 41.0 | 3.42e-01 | 100.0% | 40.0% |
| 2588759 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.61 | 42.0 | 3.53e-01 | 100.0% | 41.3% |
| 4457840 | 812.1.1.1 ↗ | a+b duplicates or obligate multimers › MinE-like › Cell division protein MinE topological specificity domain › Cell division protein MinE topological specificity domain › MinE | 0.61 | 48.0 | 4.54e-01 | 100.0% | 70.6% |
| 4372908 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.60 | 37.0 | 3.05e-01 | 89.7% | 32.8% |
| 2106290 | 304.109.1.1 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e › Ribosomal_L23 | 0.60 | 41.0 | 3.60e-01 | 100.0% | 47.5% |
| 5043507 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.60 | 43.0 | 3.55e-01 | 100.0% | 42.5% |
| 4646871 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.60 | 41.0 | 3.39e-01 | 100.0% | 39.2% |
| 3738030 | 227.1.1.4 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad1 | 0.60 | 43.0 | 3.44e-01 | 100.0% | 38.5% |
| 4976500 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.59 | 42.0 | 3.40e-01 | 100.0% | 39.1% |
| 4608521 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.59 | 54.0 | 3.77e-01 | 100.0% | 34.0% |
| 1553952 | 304.8.1.19 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › HSD_C | 0.58 | 40.0 | 3.85e-01 | 100.0% | 62.3% |
| 1556730 | 304.8.1.19 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › HSD_C | 0.58 | 40.0 | 3.61e-01 | 100.0% | 52.2% |
| 3217638 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.58 | 47.0 | 4.59e-01 | 94.1% | 98.7% |
| 3329735 | 327.11.2.37 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_DEAH11_1st | 0.57 | 40.0 | 4.02e-01 | 100.0% | 72.9% |
| 3932751 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.57 | 41.0 | 3.31e-01 | 100.0% | 39.2% |
| 5028240 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.57 | 35.0 | 2.89e-01 | 97.1% | 32.3% |
| 3225752 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.57 | 44.0 | 3.36e-01 | 89.7% | 85.8% |
| 4232371 | 227.1.1.0 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp | 0.57 | 39.0 | 3.27e-01 | 100.0% | 40.8% |
| 3281612 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.57 | 39.0 | 2.82e-01 | 72.1% | 77.1% |
| 5000468 | 227.1.1.6 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C | 0.57 | 41.0 | 3.41e-01 | 100.0% | 42.4% |
| 3967665 | 896.1.1.0 ↗ | a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related | 0.56 | 49.0 | 4.89e-01 | 100.0% | 97.1% |
| 5072976 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.56 | 46.0 | 3.37e-01 | 100.0% | 32.8% |
| 4971679 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.56 | 49.0 | 3.43e-01 | 100.0% | 36.8% |
| 3996686 | 220.1.1.47 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 | 0.56 | 41.0 | 3.23e-01 | 100.0% | 36.0% |
| 5010231 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.55 | 48.0 | 3.55e-01 | 100.0% | 38.8% |
| 3199190 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.54 | 46.0 | 3.21e-01 | 100.0% | 26.9% |
| 3506579 | 2003.1.5.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › NNMT_PNMT_TEMT | 0.54 | 44.0 | 3.06e-01 | 100.0% | 25.2% |
| 3308456 | 301.5.1.1 ↗ | a+b three layers › Bacillus chorismate mutase-like › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF › YgbB | 0.53 | 43.0 | 3.88e-01 | 100.0% | 100.0% |
| 3627817 | 220.1.1.47 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 | 0.53 | 42.0 | 2.80e-01 | 88.2% | 24.7% |
| 3385764 | 4954.1.1.0 ↗ | a+b complex topology › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit › central helical domain in RNA-polymerase beta-prime subunit | 0.52 | 42.0 | 4.08e-01 | 100.0% | 80.0% |
| 3265225 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 42.0 | 2.71e-01 | 88.2% | 31.1% |
| 4300927 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.52 | 46.0 | 3.89e-01 | 100.0% | 73.9% |
| 3471665 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.52 | 39.0 | 3.89e-01 | 83.8% | 82.9% |
| 3516032 | 2003.1.5.9 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › NNMT_PNMT_TEMT | 0.52 | 41.0 | 2.91e-01 | 100.0% | 25.8% |
| 3698212 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.52 | 41.0 | 2.65e-01 | 88.2% | 29.1% |
| 4188283 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 40.0 | 3.88e-01 | 100.0% | 73.8% |
| 4481648 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.51 | 44.0 | 3.75e-01 | 100.0% | 60.8% |
| 5058329 | 2003.1.5.81 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 | 0.51 | 43.0 | 3.13e-01 | 100.0% | 38.6% |
| 4528715 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.51 | 44.0 | 3.79e-01 | 100.0% | 63.5% |
| 4527067 | 206.1.3.40 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › ATP-grasp › ATPgrasp_YheCD | 0.51 | 42.0 | 3.00e-01 | 100.0% | 39.6% |
| 3507499 | 227.1.1.11 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 | 0.50 | 42.0 | 3.36e-01 | 100.0% | 46.7% |