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term2_saliva_scaffold_0_prodigal-single.1__X__X__00094

Bact-Vir

term2_saliva_scaffold_0_prodigal-single.1__X__X__00094

Identity

Kingdom:
phage

Quality

46.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 22-202
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gafB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 29.0 3.69e-01 85.6% 80.2%
1ah1A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 29.0 3.40e-01 85.1% 77.5%
6gmhH01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 27.0 3.00e-01 83.4% 61.1%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5017373 11.4.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › DUF4352 0.58 38.0 4.44e-01 91.7% 93.6%
3994570 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.58 33.0 3.68e-01 89.5% 69.7%
3286862 319.3.1.2 ↗ beta sandwiches › HSP20-like › B2 domain of PilQ › B2 domain of PilQ › AMIN-like 0.52 32.0 3.58e-01 75.7% 80.0%
3441397 11.1.1.51 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LEA_2 0.51 31.0 3.34e-01 83.4% 70.7%
D2 medium residues 203-267
PDB
D3 medium residues 588-763
PDB
D4 medium residues 764-852
PDB
D5 medium residues 853-937
PDB
D6 medium residues 938-1024
PDB
D7 medium residues 1025-1138
PDB
D8 medium residues 1327-1352_1387-1497_1510-1520_1616-1637
PDB
D9 medium residues 1638-1714
PDB