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term2_saliva_scaffold_0_prodigal-single.1__X__X__00140
Bact-Virterm2_saliva_scaffold_0_prodigal-single.1__X__X__00140
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-75
D2
high
residues 87-263
Domain cluster:
rep: IMGVR_UViG_3300048043_000031-3300048043-Ga0497334_000918_4408_7440__D132-304
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7lscA01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.82 | 65.0 | 7.08e-01 | 94.4% | 98.0% |
| 3ci6B00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.81 | 65.0 | 6.74e-01 | 100.0% | 89.7% |
| 3o5yB00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.81 | 64.0 | 7.03e-01 | 98.3% | 100.0% |
| 4g3vA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.80 | 63.0 | 6.59e-01 | 96.0% | 88.3% |
| 3eeaA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.80 | 65.0 | 6.97e-01 | 96.6% | 98.0% |
| 6p58A00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.79 | 63.0 | 6.85e-01 | 96.0% | 98.7% |
| 5l10B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.78 | 65.0 | 6.62e-01 | 96.0% | 90.0% |
| 3e0yA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.77 | 58.0 | 6.20e-01 | 98.3% | 88.4% |
| 2vzwB00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.76 | 60.0 | 6.54e-01 | 96.0% | 97.3% |
| 4bwiB01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.75 | 68.0 | 6.57e-01 | 96.6% | 86.5% |
| 2vjwA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.75 | 56.0 | 6.27e-01 | 96.6% | 98.6% |
| 6uv8A01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.75 | 66.0 | 6.58e-01 | 94.4% | 91.1% |
| 1ykdB01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.73 | 64.0 | 6.26e-01 | 98.3% | 85.5% |
| 2v0uA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.70 | 54.0 | 5.90e-01 | 93.2% | 97.3% |
| 4r70B01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.68 | 64.0 | 6.11e-01 | 100.0% | 88.2% |
| 4i5sA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.66 | 38.0 | 4.89e-01 | 72.9% | 100.0% |
| 5tjjB02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.65 | 58.0 | 5.85e-01 | 94.4% | 98.9% |
| 6bwsB00 | 3.30.450.150 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain | 0.63 | 46.0 | 5.12e-01 | 92.1% | 95.6% |
| 3fpwA01 | 3.30.450.150 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain | 0.63 | 44.0 | 5.11e-01 | 91.0% | 100.0% |
| 5w1eA01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.63 | 55.0 | 5.48e-01 | 93.8% | 97.9% |
| 2g7uC02 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.63 | 56.0 | 5.59e-01 | 93.8% | 97.2% |
| 4r3aA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 51.0 | 5.19e-01 | 96.0% | 86.4% |
| 4nkpA01 | 3.30.450.150 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem-degrading domain | 0.63 | 45.0 | 5.17e-01 | 92.1% | 100.0% |
| 5hpfA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.63 | 56.0 | 5.63e-01 | 93.8% | 100.0% |
| 3eqvA02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.62 | 44.0 | 5.00e-01 | 93.8% | 94.7% |
| 2vfrA04 | 3.30.70.2520 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 27.0 | 3.62e-01 | 93.8% | 77.7% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.58 | 30.0 | 3.46e-01 | 81.4% | 65.4% |
| 5svgC00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 38.0 | 4.49e-01 | 70.6% | 97.5% |
| 3tupA02 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.57 | 26.0 | 3.43e-01 | 93.8% | 77.1% |
| 1b7yB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.56 | 25.0 | 3.42e-01 | 90.4% | 82.6% |
| 2dgkA02 | 3.90.1150.160 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › | 0.55 | 24.0 | 3.01e-01 | 93.2% | 63.6% |
| 5df7A02 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.55 | 49.0 | 3.96e-01 | 96.0% | 96.5% |
| 4u3tB00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.55 | 49.0 | 4.01e-01 | 94.4% | 97.8% |
| 6kghA02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 41.0 | 4.35e-01 | 93.2% | 90.9% |
| 3ramA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.50 | 25.0 | 2.93e-01 | 93.8% | 65.3% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4968253 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.85 | 72.0 | 7.19e-01 | 98.3% | 86.1% |
| 5050153 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.84 | 70.0 | 7.20e-01 | 96.6% | 89.4% |
| 4950560 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.84 | 69.0 | 5.54e-01 | 95.5% | 47.2% |
| 4939836 | 223.1.1.3 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF | 0.84 | 72.0 | 6.98e-01 | 98.3% | 81.0% |
| 3600849 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.79 | 62.0 | 6.76e-01 | 98.9% | 96.0% |
| 5049059 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.75 | 48.0 | 5.48e-01 | 86.4% | 83.7% |
| 4265963 | 223.1.1.23 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_2 | 0.75 | 63.0 | 6.23e-01 | 96.0% | 83.8% |
| None | — | 0.73 | 63.0 | 4.83e-01 | 98.3% | 42.4% | |
| 3645566 | 223.1.1.79 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_NLP | 0.72 | 62.0 | 6.25e-01 | 91.5% | 98.3% |
| 3308989 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.71 | 61.0 | 6.21e-01 | 91.0% | 93.5% |
| 5051461 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.70 | 49.0 | 5.02e-01 | 91.0% | 72.9% |
| 3645719 | 223.1.1.79 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GAF_NLP | 0.70 | 61.0 | 5.97e-01 | 93.2% | 96.9% |
| 5053192 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.70 | 51.0 | 5.75e-01 | 92.1% | 97.0% |
| 1680002 | 223.1.1.28 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › bHLH-MYC_N | 0.70 | 60.0 | 6.02e-01 | 90.4% | 97.8% |
| 5053322 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.69 | 46.0 | 5.09e-01 | 88.1% | 82.1% |
| 3781073 | 223.2.1.29 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DENND11 | 0.68 | 48.0 | 5.36e-01 | 83.6% | 90.7% |
| 5050533 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 44.0 | 4.88e-01 | 87.6% | 83.6% |
| 5049631 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 45.0 | 5.03e-01 | 81.9% | 87.1% |
| 3711910 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.66 | 49.0 | 5.14e-01 | 86.4% | 83.7% |
| 3970024 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.65 | 58.0 | 5.87e-01 | 93.8% | 100.0% |
| 3940520 | 223.2.1.34 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 | 0.65 | 44.0 | 4.69e-01 | 85.3% | 77.4% |
| 2725646 | 4.8.1.29 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › SH3_AEBP2_C | 0.65 | 27.0 | 3.19e-01 | 73.4% | 52.4% |
| 3584409 | 223.2.1.34 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 | 0.65 | 45.0 | 4.66e-01 | 85.3% | 74.1% |
| 3168866 | 223.2.1.34 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 | 0.64 | 46.0 | 4.76e-01 | 89.3% | 77.4% |
| 4962164 | 223.1.1.4 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › IclR | 0.64 | 57.0 | 5.57e-01 | 94.4% | 94.7% |
| 3779994 | 223.2.1.34 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › NPR2 | 0.63 | 43.0 | 4.47e-01 | 86.4% | 73.3% |
| 4488170 | 223.1.1.4 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › IclR | 0.63 | 56.0 | 5.60e-01 | 93.8% | 98.9% |
| 3914739 | 223.1.1.78 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › GPR158_179_EC | 0.62 | 48.0 | 4.61e-01 | 80.2% | 83.4% |
| 3059233 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 53.0 | 5.56e-01 | 98.3% | 100.0% |
| 4949741 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.61 | 41.0 | 4.74e-01 | 76.3% | 95.2% |
| 4944155 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.61 | 48.0 | 5.15e-01 | 95.5% | 95.5% |
| 3574420 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.56 | 43.0 | 4.53e-01 | 81.9% | 87.5% |
| 3995035 | 223.1.1.29 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_11 | 0.55 | 37.0 | 3.93e-01 | 72.9% | 76.1% |
| 4999233 | 304.21.1.1 ↗ | a+b two layers › Alpha-beta plaits › Formylmethanofuran:tetrahydromethanopterin formyltransferase › Formylmethanofuran:tetrahydromethanopterin formyltransferase › FTR | 0.50 | 27.0 | 2.75e-01 | 93.8% | 49.1% |
| 3536897 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.50 | 25.0 | 2.98e-01 | 94.4% | 68.7% |