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term2_saliva_scaffold_0_prodigal-single.1__X__X__00201
Bact-Virterm2_saliva_scaffold_0_prodigal-single.1__X__X__00201
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-31_76-107_135-159
D2
medium
residues 32-75_108-134
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e4fA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.62 | 46.0 | 3.83e-01 | 83.1% | 70.2% |
| 1wzoA01 | 2.30.30.370 | Mainly Beta › Roll › SH3 type barrels. › FAH | 0.58 | 32.0 | 3.80e-01 | 100.0% | 92.5% |
| 3v5nB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.57 | 35.0 | 2.61e-01 | 91.5% | 22.8% |
| 3ddmA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.57 | 44.0 | 3.78e-01 | 88.7% | 87.2% |
| 1vkcA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 42.0 | 3.41e-01 | 80.3% | 87.1% |
| 2qg3A00 | 3.30.1960.10 | Alpha Beta › 2-Layer Sandwich › SSo0622-like fold › tRNA wybutosine-synthesizing-like | 0.55 | 47.0 | 3.43e-01 | 94.4% | 85.1% |
| 4h4rA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.52 | 41.0 | 3.03e-01 | 84.5% | 87.6% |
| 1z6nA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 41.0 | 3.23e-01 | 91.5% | 78.9% |
| 1wxcB01 | 3.30.1880.10 | Alpha Beta › 2-Layer Sandwich › protein ne1242 fold › protein ne1242 domain like | 0.51 | 38.0 | 4.04e-01 | 93.0% | 96.8% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3527277 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.67 | 59.0 | 4.34e-01 | 100.0% | 65.1% |
| 4353121 | 218.1.1.8 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › HrcA | 0.65 | 50.0 | 4.51e-01 | 84.5% | 99.0% |
| 3708221 | 633.23.1.23 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin | 0.62 | 52.0 | 4.08e-01 | 100.0% | 73.6% |
| 3478959 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.62 | 54.0 | 4.02e-01 | 100.0% | 67.4% |
| 3701133 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.62 | 52.0 | 3.91e-01 | 100.0% | 64.8% |
| 3408722 | 633.23.1.20 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Atthog | 0.61 | 51.0 | 4.05e-01 | 100.0% | 66.7% |
| 4194016 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.61 | 37.0 | 3.89e-01 | 91.5% | 67.7% |
| 5050687 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.60 | 51.0 | 4.11e-01 | 100.0% | 73.5% |
| 3888075 | 633.23.1.1 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › PMP22_Claudin | 0.60 | 51.0 | 3.85e-01 | 100.0% | 68.2% |
| 5025277 | 284.1.1.13 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › FKBP-like_N | 0.60 | 42.0 | 4.57e-01 | 100.0% | 96.4% |
| 3564439 | 2.6.1.0 ↗ | beta barrels › OB-fold › Staphylococcal nuclease › Staphylococcal nuclease | 0.58 | 34.0 | 3.07e-01 | 74.6% | 42.0% |
| 3843423 | 2484.5.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 | 0.56 | 46.0 | 3.89e-01 | 94.4% | 85.4% |
| 3594618 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.56 | 43.0 | 3.18e-01 | 83.1% | 91.9% |
| 3504023 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.54 | 42.0 | 2.86e-01 | 83.1% | 65.2% |
| 1223288 | 4246.1.1.0 ↗ | a+b complex topology › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit › N-terminal domain in RNA-polymerase beta-prime subunit | 0.54 | 30.0 | 3.20e-01 | 100.0% | 58.7% |
| 4955150 | 304.51.1.0 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related | 0.53 | 46.0 | 3.33e-01 | 100.0% | 65.7% |
| 3738846 | 633.23.1.12 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Fig1 | 0.52 | 46.0 | 3.33e-01 | 100.0% | 90.0% |
| 4567436 | 245.2.1.1 ↗ | a+b two layers › Ribonuclease PH domain 2-like › YbaB › YbaB › YbaB_DNA_bd | 0.51 | 39.0 | 3.69e-01 | 83.1% | 74.1% |
| 3598725 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.51 | 42.0 | 3.23e-01 | 100.0% | 63.0% |