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term2_saliva_scaffold_1_prodigal-single.1__X__X__00016
Bact-Virterm2_saliva_scaffold_1_prodigal-single.1__X__X__00016
Identity
- Kingdom:
- phage
Quality
72.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-163
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3aa0B02 | 3.90.1150.210 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › F-actin capping protein, beta subunit | 0.69 | 49.0 | 5.02e-01 | 72.0% | 87.1% |
| 1tk1A00 | 3.40.1500.10 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic | 0.66 | 47.0 | 4.21e-01 | 72.0% | 86.8% |
| 4htgA03 | 3.30.160.40 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain | 0.65 | 33.0 | 4.55e-01 | 70.2% | 98.7% |
| 2daxA01 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.54 | 37.0 | 3.98e-01 | 71.4% | 88.7% |
| 2zxkA00 | 3.40.1500.20 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › | 0.53 | 44.0 | 3.74e-01 | 89.4% | 94.0% |
| 4kghA00 | 3.15.10.10 | Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 | 0.51 | 43.0 | 4.05e-01 | 88.8% | 97.9% |
| 4akmB00 | 2.40.160.110 | Mainly Beta › Beta Barrel › Porin › | 0.51 | 39.0 | 4.00e-01 | 80.7% | 86.0% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5065294 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.67 | 49.0 | 4.83e-01 | 74.5% | 91.2% |
| 3885687 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.66 | 46.0 | 3.84e-01 | 71.4% | 99.6% |
| 3504606 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.61 | 43.0 | 3.50e-01 | 70.2% | 66.6% |
| 2373 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.60 | 43.0 | 3.63e-01 | 73.3% | 99.6% |
| 3254677 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.57 | 37.0 | 4.35e-01 | 71.4% | 94.5% |
| 5001418 | 3080.1.1.0 ↗ | a+b complex topology › Necrosis and ethylene-inducing peptide 1-like proteins › Necrosis and ethylene-inducing peptide 1-like proteins › Necrosis and ethylene-inducing peptide 1-like proteins | 0.57 | 48.0 | 3.93e-01 | 89.4% | 99.0% |
| 3820181 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.56 | 39.0 | 4.27e-01 | 72.7% | 85.2% |
| 3488509 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.56 | 41.0 | 3.95e-01 | 75.2% | 98.3% |
| 3952882 | 331.3.1.27 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF2505 | 0.56 | 43.0 | 4.26e-01 | 81.4% | 90.8% |
| 3262176 | 216.1.1.4 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › RWD | 0.55 | 39.0 | 3.71e-01 | 72.0% | 65.3% |
| 3433806 | 5.1.2.29 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF1668 | 0.54 | 34.0 | 3.06e-01 | 92.5% | 44.9% |
| 4060896 | 4252.1.1.5 ↗ | beta barrels › AttH-like › AttH-like › AttH-like › Svf1 | 0.54 | 46.0 | 4.28e-01 | 91.9% | 73.4% |
| 3931298 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.53 | 37.0 | 4.13e-01 | 71.4% | 90.4% |
| 4142339 | 4099.1.1.4 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › CENP-O | 0.53 | 37.0 | 3.94e-01 | 72.0% | 80.7% |
| 4168239 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.50 | 43.0 | 3.57e-01 | 93.2% | 81.4% |
| 4185639 | 5087.2.1.2 ↗ | beta meanders › Lipovitellin-phosvitin complex › Lipovitellin LV-1N › Lipovitellin LV-1N › PF29934 | 0.50 | 43.0 | 3.52e-01 | 93.2% | 83.6% |