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term2_saliva_scaffold_1_prodigal-single.1__X__X__00048
Bact-Virterm2_saliva_scaffold_1_prodigal-single.1__X__X__00048
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-69
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lttA00 | 2.30.31.70 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.77 | 66.0 | 6.23e-01 | 100.0% | 78.4% |
| 3nv0B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 53.0 | 4.08e-01 | 91.7% | 51.5% |
| 6ro0F00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.64 | 44.0 | 3.81e-01 | 73.3% | 99.0% |
| 2qiyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.60 | 50.0 | 3.92e-01 | 93.3% | 49.3% |
| 2vijA01 | 2.40.70.10 | Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases | 0.60 | 48.0 | 3.88e-01 | 95.0% | 97.7% |
| 2x45A00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 42.0 | 3.19e-01 | 75.0% | 31.2% |
| 3q90B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 52.0 | 4.09e-01 | 100.0% | 49.2% |
| 1of5B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 49.0 | 3.90e-01 | 95.0% | 88.3% |
| 1ar0A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 49.0 | 3.94e-01 | 96.7% | 52.8% |
| 1jkgA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 50.0 | 3.83e-01 | 96.7% | 54.0% |
| 3blzA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 48.0 | 3.87e-01 | 95.0% | 86.3% |
| 2xu7A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.57 | 48.0 | 3.02e-01 | 98.3% | 21.7% |
| 5aigA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 47.0 | 3.75e-01 | 93.3% | 68.5% |
| 5tgnA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.56 | 47.0 | 3.90e-01 | 93.3% | 51.4% |
| 1jmxA02 | 2.40.128.120 | Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 | 0.56 | 43.0 | 3.58e-01 | 85.0% | 56.0% |
| 6ro0D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 38.0 | 3.27e-01 | 73.3% | 99.1% |
| 2b02A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 45.0 | 3.80e-01 | 90.0% | 76.0% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 47.0 | 4.11e-01 | 100.0% | 93.7% |
| 2h36X00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.55 | 47.0 | 3.94e-01 | 100.0% | 82.4% |
| 4d47A00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 46.0 | 2.86e-01 | 100.0% | 35.0% |
| 3bm4A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.54 | 41.0 | 2.97e-01 | 85.0% | 62.9% |
| 2kigA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.54 | 46.0 | 3.45e-01 | 100.0% | 42.2% |
| 5a67A00 | 2.40.320.10 | Mainly Beta › Beta Barrel › Hypothetical Protein Pfu-838710-001 › Hypothetical Protein Pfu-838710-001 | 0.53 | 44.0 | 3.14e-01 | 96.7% | 32.5% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.53 | 46.0 | 3.40e-01 | 100.0% | 67.1% |
| 3n8bA00 | 3.10.450.700 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 44.0 | 4.15e-01 | 96.7% | 76.0% |
| 6hmjA01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.52 | 45.0 | 3.78e-01 | 100.0% | 78.1% |
| 3k7cA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 39.0 | 3.31e-01 | 85.0% | 88.9% |
| 3p9vA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.51 | 42.0 | 3.17e-01 | 95.0% | 74.1% |
ECOD (32)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1033236 | 295.1.1.1 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 | 0.74 | 66.0 | 6.18e-01 | 100.0% | 79.7% |
| 3666026 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.68 | 56.0 | 4.93e-01 | 91.7% | 67.8% |
| 3997515 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.67 | 53.0 | 3.54e-01 | 93.3% | 20.8% |
| 3466699 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.66 | 52.0 | 4.44e-01 | 86.7% | 66.3% |
| 4348187 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.64 | 53.0 | 4.84e-01 | 96.7% | 72.9% |
| 3419997 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.64 | 53.0 | 4.35e-01 | 91.7% | 53.2% |
| 4968133 | 4312.1.1.1 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like › BrnT_toxin | 0.63 | 53.0 | 4.70e-01 | 100.0% | 66.7% |
| 3219430 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.62 | 53.0 | 4.29e-01 | 96.7% | 55.7% |
| 4984555 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.61 | 51.0 | 3.32e-01 | 98.3% | 29.7% |
| 4177861 | 243.1.1.66 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TcaA_5th | 0.61 | 49.0 | 3.97e-01 | 90.0% | 75.0% |
| 4011330 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.60 | 52.0 | 4.08e-01 | 100.0% | 49.6% |
| 4339414 | 243.3.1.1 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Cystatin | 0.60 | 51.0 | 4.35e-01 | 96.7% | 58.0% |
| 4870077 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.60 | 51.0 | 3.98e-01 | 98.3% | 50.4% |
| 5037223 | 2.1.1.12 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S28e | 0.59 | 47.0 | 4.75e-01 | 88.3% | 93.3% |
| 3658474 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.59 | 49.0 | 4.34e-01 | 98.3% | 78.9% |
| 3947188 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.58 | 50.0 | 4.25e-01 | 100.0% | 69.5% |
| 4594248 | 243.1.1.2 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › NTF2 | 0.58 | 50.0 | 3.84e-01 | 96.7% | 52.9% |
| 3279044 | 2.1.1.314 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF27099 | 0.57 | 45.0 | 4.40e-01 | 88.3% | 90.8% |
| 1907494 | 243.1.1.18 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_2 | 0.56 | 47.0 | 3.90e-01 | 93.3% | 51.4% |
| 3213694 | 243.1.1.75 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 | 0.56 | 48.0 | 3.92e-01 | 96.7% | 84.3% |
| 4959306 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 46.0 | 2.99e-01 | 98.3% | 27.5% |
| 4249355 | 5.1.2.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N | 0.56 | 46.0 | 3.01e-01 | 100.0% | 34.5% |
| 3527512 | 220.1.1.32 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind | 0.55 | 45.0 | 3.63e-01 | 100.0% | 80.7% |
| 4932581 | 2.1.1.12 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S28e | 0.55 | 40.0 | 3.96e-01 | 83.3% | 87.7% |
| 4124096 | 809.1.1.1 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA | 0.54 | 42.0 | 3.85e-01 | 86.7% | 82.5% |
| 2878158 | 243.1.1.8 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › MlaC | 0.54 | 41.0 | 3.07e-01 | 86.7% | 76.7% |
| 3619496 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.53 | 46.0 | 2.90e-01 | 100.0% | 20.0% |
| 3593024 | 331.9.1.0 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain | 0.53 | 43.0 | 3.49e-01 | 88.3% | 46.1% |
| 146266 | 295.1.1.8 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF3276 | 0.53 | 44.0 | 4.03e-01 | 96.7% | 67.9% |
| 4661228 | 809.1.1.1 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP › SmpA_OmlA | 0.52 | 44.0 | 3.91e-01 | 98.3% | 80.0% |
| 3782242 | 331.9.1.4 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla | 0.52 | 43.0 | 3.56e-01 | 93.3% | 51.8% |
| 3818341 | 331.9.1.4 ↗ | a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Coatomer_g_Cpla | 0.51 | 41.0 | 3.86e-01 | 93.3% | 74.4% |