←Back to structures
term2_saliva_scaffold_1_prodigal-single.1__X__X__00126
Bact-Virterm2_saliva_scaffold_1_prodigal-single.1__X__X__00126
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-49_129-147
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zdiC00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.59 | 39.0 | 3.07e-01 | 91.2% | 31.8% |
| 2iqiB00 | 3.40.50.10610 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ABC-type transport auxiliary lipoprotein component | 0.56 | 40.0 | 2.92e-01 | 73.5% | 64.3% |
| 2vszB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 34.0 | 2.87e-01 | 70.6% | 34.2% |
| 1wi0A00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.52 | 37.0 | 3.13e-01 | 75.0% | 45.1% |
| 3qthB00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.51 | 35.0 | 2.78e-01 | 75.0% | 79.9% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3630462 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.66 | 33.0 | 2.57e-01 | 75.0% | 22.9% |
| 3942661 | 620.1.1.2 ↗ | alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB | 0.62 | 44.0 | 3.38e-01 | 73.5% | 89.0% |
| 4973468 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.61 | 39.0 | 3.05e-01 | 83.8% | 31.4% |
| 5026722 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.61 | 40.0 | 3.18e-01 | 89.7% | 34.1% |
| 4027679 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.60 | 35.0 | 3.01e-01 | 73.5% | 38.1% |
| 3640935 | 3543.1.1.4 ↗ | alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › DUF716 | 0.60 | 44.0 | 3.10e-01 | 79.4% | 37.9% |
| 4458171 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.60 | 39.0 | 3.19e-01 | 91.2% | 35.4% |
| 4564040 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.60 | 40.0 | 3.18e-01 | 91.2% | 34.8% |
| 3932006 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 39.0 | 3.22e-01 | 89.7% | 39.1% |
| 4494181 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.59 | 41.0 | 3.21e-01 | 94.1% | 34.5% |
| 4211030 | 4002.1.1.4 ↗ | alpha bundles › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › alpha-helical domain in dehydroquinate synthase-like enzymes › DHQS_C | 0.58 | 41.0 | 2.92e-01 | 73.5% | 30.3% |
| 4956419 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.58 | 39.0 | 3.20e-01 | 91.2% | 38.2% |
| 3575976 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.58 | 38.0 | 2.94e-01 | 89.7% | 31.7% |
| 4463557 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.57 | 36.0 | 3.21e-01 | 77.9% | 46.3% |
| 3390284 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.57 | 38.0 | 2.90e-01 | 91.2% | 30.7% |
| 3592209 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.56 | 39.0 | 3.32e-01 | 94.1% | 44.5% |
| 3212393 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.56 | 38.0 | 3.28e-01 | 94.1% | 44.5% |
| 3703290 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 38.0 | 2.96e-01 | 94.1% | 32.7% |
| 3583546 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 38.0 | 3.07e-01 | 94.1% | 36.3% |
| 4403516 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 38.0 | 3.15e-01 | 94.1% | 39.5% |
| 3800501 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.55 | 40.0 | 3.08e-01 | 94.1% | 35.9% |
| 3175074 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 47.0 | 2.77e-01 | 100.0% | 81.4% |
| 3990696 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.54 | 39.0 | 2.79e-01 | 97.1% | 25.5% |
| 3398317 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.54 | 37.0 | 2.82e-01 | 94.1% | 30.0% |
| 3816396 | 3543.1.1.4 ↗ | alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › DUF716 | 0.54 | 41.0 | 2.89e-01 | 83.8% | 34.9% |
| 3985268 | 5085.1.1.1 ↗ | a+b duplicates or obligate multimers › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) › OEP | 0.54 | 38.0 | 2.51e-01 | 73.5% | 86.3% |
| 3173926 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.54 | 37.0 | 2.71e-01 | 86.8% | 27.2% |
| 3502564 | 312.1.1.6 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › CwfJ_C_2,CwfJ_C_1 | 0.53 | 42.0 | 3.37e-01 | 88.2% | 100.0% |
| 3941423 | 252.2.1.5 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_3 | 0.53 | 37.0 | 3.48e-01 | 75.0% | 94.1% |
D2
medium
residues 50-128
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r8eA02 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.50 | 36.0 | 3.75e-01 | 78.5% | 87.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004560 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 54.0 | 6.24e-01 | 83.5% | 100.0% |
| 4995817 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.76 | 62.0 | 6.51e-01 | 92.4% | 100.0% |
| 4283531 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.60 | 41.0 | 4.31e-01 | 72.2% | 91.4% |
| 4953943 | 102.2.1.6 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH › HI0933_like_1st | 0.58 | 41.0 | 4.34e-01 | 75.9% | 94.3% |
| 4985201 | 7584.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins | 0.56 | 39.0 | 2.80e-01 | 75.9% | 23.2% |
| 4949606 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.55 | 38.0 | 2.76e-01 | 75.9% | 22.7% |
| 4981687 | 7584.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins › Rossmann-like domain in Acetyl-CoA synthetase-like proteins | 0.54 | 38.0 | 2.73e-01 | 75.9% | 23.2% |
| 3967480 | 142.1.1.3 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › Sigma70_r2 | 0.54 | 38.0 | 3.53e-01 | 75.9% | 65.7% |