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term2_saliva_scaffold_1_prodigal-single.1__X__X__00161
Bact-Virterm2_saliva_scaffold_1_prodigal-single.1__X__X__00161
Identity
- Kingdom:
- phage
Quality
53.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 15-139
Domain cluster:
representative
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hraA01 | 3.40.30.70 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › | 0.68 | 38.0 | 4.44e-01 | 87.2% | 76.4% |
| 4mp4A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.67 | 40.0 | 4.64e-01 | 92.8% | 82.0% |
| 4kh7B01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.62 | 42.0 | 4.91e-01 | 76.8% | 97.8% |
| 4gdhA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.62 | 46.0 | 3.97e-01 | 77.6% | 100.0% |
| 1ovnB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.62 | 44.0 | 4.50e-01 | 74.4% | 87.0% |
| 1b48A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 40.0 | 4.52e-01 | 93.6% | 86.5% |
| 2fa8B00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 41.0 | 4.72e-01 | 75.2% | 100.0% |
| 1d7aA00 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 43.0 | 4.01e-01 | 75.2% | 94.4% |
| 1g7eA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.60 | 42.0 | 4.25e-01 | 72.0% | 89.3% |
| 4hz2A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 38.0 | 4.55e-01 | 72.8% | 100.0% |
| 4exjB01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.59 | 39.0 | 4.33e-01 | 93.6% | 84.2% |
| 1moqA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.58 | 45.0 | 3.81e-01 | 84.0% | 72.0% |
| 5c5dD00 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 42.0 | 3.90e-01 | 76.0% | 93.7% |
| 6gs2C01 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.56 | 43.0 | 3.52e-01 | 82.4% | 95.4% |
| 4w66B00 | 1.20.1050.130 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 48.0 | 4.00e-01 | 95.2% | 84.5% |
| 1tjyA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 40.0 | 3.73e-01 | 80.8% | 99.4% |
| 4rsmD01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 41.0 | 3.78e-01 | 84.0% | 98.2% |
| 1nbwB00 | 3.40.50.10150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › B12-dependent dehydatase associated subunit | 0.51 | 40.0 | 4.18e-01 | 82.4% | 100.0% |
| 3ahcA03 | 3.40.50.920 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 44.0 | 3.89e-01 | 93.6% | 92.3% |
| 4rk6A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 40.0 | 4.01e-01 | 81.6% | 100.0% |
| 2vk2A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 38.0 | 3.80e-01 | 79.2% | 99.2% |
| 1xovA01 | 3.40.630.40 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn-dependent exopeptidases | 0.50 | 43.0 | 3.96e-01 | 99.2% | 98.9% |
| 2hzlB01 | 3.40.190.170 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 | 0.50 | 40.0 | 3.34e-01 | 84.8% | 75.7% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1153934 | 2485.1.1.40 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_3 | 0.73 | 41.0 | 5.28e-01 | 72.0% | 100.0% |
| 4861947 | 109.1.1.28 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › CLIC-like_N | 0.67 | 46.0 | 5.30e-01 | 81.6% | 98.9% |
| 3995118 | 2485.1.1.74 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_4 | 0.67 | 44.0 | 4.91e-01 | 72.8% | 84.0% |
| 3388891 | 2485.1.1.74 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_4 | 0.67 | 47.0 | 5.44e-01 | 72.8% | 100.0% |
| 3392058 | 2485.1.1.74 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_4 | 0.66 | 44.0 | 5.19e-01 | 73.6% | 100.0% |
| 2983383 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.61 | 39.0 | 4.48e-01 | 77.6% | 92.9% |
| None | — | 0.61 | 51.0 | 4.33e-01 | 91.2% | 92.9% | |
| None | — | 0.60 | 52.0 | 4.29e-01 | 96.8% | 88.1% | |
| None | — | 0.59 | 51.0 | 4.12e-01 | 93.6% | 86.0% | |
| None | — | 0.58 | 51.0 | 4.21e-01 | 96.0% | 92.4% | |
| 3743784 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.58 | 49.0 | 4.15e-01 | 92.8% | 94.4% |
| 3645697 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.58 | 51.0 | 3.89e-01 | 95.2% | 88.8% |
| None | — | 0.58 | 50.0 | 4.24e-01 | 95.2% | 94.4% | |
| None | — | 0.58 | 51.0 | 4.24e-01 | 96.8% | 91.4% | |
| 3944246 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.58 | 50.0 | 4.22e-01 | 94.4% | 94.3% |
| 3703801 | 2485.1.1.13 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N | 0.58 | 46.0 | 4.68e-01 | 84.8% | 92.5% |
| 3689047 | 7510.1.1.1 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh | 0.57 | 49.0 | 4.27e-01 | 95.2% | 100.0% |
| 419706 | 2007.1.9.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › AIRC | 0.57 | 42.0 | 3.89e-01 | 76.0% | 93.1% |
| 3707931 | 2485.1.1.13 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N | 0.57 | 48.0 | 4.13e-01 | 92.0% | 96.0% |
| None | — | 0.57 | 50.0 | 4.25e-01 | 96.8% | 94.6% | |
| 3618460 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.57 | 50.0 | 4.22e-01 | 97.6% | 90.2% |
| 3675467 | 2485.1.1.13 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N | 0.56 | 48.0 | 4.20e-01 | 92.8% | 91.6% |
| None | — | 0.56 | 50.0 | 4.15e-01 | 96.8% | 90.7% | |
| 3829678 | 109.1.1.36 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_N | 0.56 | 48.0 | 3.95e-01 | 93.6% | 87.0% |
| 4596170 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.55 | 48.0 | 4.09e-01 | 96.0% | 92.9% |
| None | — | 0.55 | 49.0 | 4.14e-01 | 96.8% | 92.7% | |
| None | — | 0.55 | 48.0 | 4.12e-01 | 97.6% | 93.8% | |
| 3708128 | 109.1.1.36 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_N | 0.55 | 48.0 | 4.08e-01 | 96.8% | 91.4% |
| None | — | 0.55 | 47.0 | 3.85e-01 | 94.4% | 87.9% | |
| 3615386 | 109.1.1.42 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › Glutaredoxin | 0.55 | 49.0 | 3.79e-01 | 98.4% | 88.6% |
| 3643401 | 109.1.1.26 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_N_3 | 0.55 | 47.0 | 3.97e-01 | 95.2% | 93.6% |
| 3686073 | 109.1.1.37 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_N_2 | 0.55 | 47.0 | 3.77e-01 | 94.4% | 88.3% |
| 3969234 | 109.1.1.26 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_N_3 | 0.55 | 47.0 | 4.03e-01 | 94.4% | 96.1% |
| 3708318 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.54 | 46.0 | 3.89e-01 | 92.0% | 91.0% |
| 5056365 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.54 | 38.0 | 4.29e-01 | 74.4% | 96.8% |
| 4014248 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.54 | 46.0 | 3.76e-01 | 92.8% | 88.6% |
| 3608344 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.53 | 44.0 | 4.23e-01 | 91.2% | 83.4% |
| 4972318 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.53 | 37.0 | 4.15e-01 | 73.6% | 98.9% |
| 3594249 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.53 | 40.0 | 3.44e-01 | 80.0% | 97.0% |
| 3271767 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.52 | 45.0 | 3.39e-01 | 96.8% | 89.8% |
| 3929588 | 109.1.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C | 0.52 | 43.0 | 3.90e-01 | 94.4% | 84.2% |
| 1675270 | 2011.1.1.2 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M14,Pepdidase_M14_N | 0.51 | 42.0 | 3.05e-01 | 90.4% | 70.0% |
D2
medium
residues 142-247