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term3_saliva_scaffold_0_prodigal-single.1__X__X__00060
Bact-Virterm3_saliva_scaffold_0_prodigal-single.1__X__X__00060
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-83
Domain cluster:
representative
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6xrbA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.68 | 53.0 | 4.40e-01 | 81.9% | 50.4% |
| 3nqzA02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.67 | 51.0 | 5.09e-01 | 81.9% | 85.7% |
| 1ugiD00 | 3.10.450.20 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor | 0.66 | 59.0 | 6.01e-01 | 97.6% | 100.0% |
| 4dm5A00 | 3.30.1450.10 | Alpha Beta › 2-Layer Sandwich › Beta-lactamase Inhibitory Protein; Chain:B, domain 1 › | 0.66 | 43.0 | 4.31e-01 | 78.3% | 64.4% |
| 2oviA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.64 | 52.0 | 4.20e-01 | 86.7% | 79.7% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.63 | 53.0 | 4.20e-01 | 91.6% | 72.1% |
| 1v5mA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 48.0 | 4.06e-01 | 80.7% | 66.9% |
| 1av4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.63 | 54.0 | 3.51e-01 | 98.8% | 86.6% |
| 2b02A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.63 | 47.0 | 4.32e-01 | 78.3% | 95.2% |
| 3fzxA00 | 2.40.360.20 | Mainly Beta › Beta Barrel › YmcC-like fold › | 0.62 | 54.0 | 4.09e-01 | 98.8% | 95.8% |
| 3nv0B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 47.0 | 4.01e-01 | 80.7% | 84.6% |
| 2ciuA00 | 3.10.450.320 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 | 0.61 | 53.0 | 4.67e-01 | 97.6% | 90.2% |
| 3tzgA00 | 2.40.160.150 | Mainly Beta › Beta Barrel › Porin › | 0.61 | 47.0 | 3.45e-01 | 85.5% | 32.6% |
| 1gpqB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.61 | 53.0 | 4.61e-01 | 97.6% | 71.9% |
| 4hgzA02 | 2.20.25.570 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 41.0 | 4.59e-01 | 100.0% | 96.7% |
| 4n6tA00 | 3.10.450.10 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 43.0 | 4.41e-01 | 77.1% | 91.1% |
| 8fkmA01 | 3.30.1460.50 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.58 | 47.0 | 3.85e-01 | 90.4% | 84.1% |
| 7a6pB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 46.0 | 3.91e-01 | 85.5% | 76.1% |
| 5n9bA01 | 2.60.40.2160 | Mainly Beta › Sandwich › Immunoglobulin-like › Interleukin-17 receptor A/B, fibronectin-III-like domain 1 | 0.58 | 40.0 | 3.39e-01 | 71.1% | 62.8% |
| 3icyA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.58 | 41.0 | 3.68e-01 | 74.7% | 58.5% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 43.0 | 3.92e-01 | 79.5% | 88.4% |
| 2gr7A00 | 3.30.1300.30 | Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like | 0.57 | 39.0 | 3.67e-01 | 100.0% | 57.4% |
| 1uzxA00 | 3.10.110.10 | Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme | 0.57 | 50.0 | 4.29e-01 | 100.0% | 64.3% |
| 3atsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 42.0 | 3.83e-01 | 79.5% | 97.4% |
| 3rd6A00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.56 | 44.0 | 3.65e-01 | 84.3% | 50.0% |
| 5iu1B00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 41.0 | 3.76e-01 | 79.5% | 87.5% |
| 1v2bB00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.55 | 47.0 | 3.93e-01 | 97.6% | 80.1% |
| 3bwlB00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.55 | 40.0 | 3.57e-01 | 78.3% | 76.4% |
| 3oloA00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.54 | 40.0 | 3.72e-01 | 81.9% | 80.2% |
| 4hh2C04 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 40.0 | 3.60e-01 | 81.9% | 81.2% |
| 2qguA01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 44.0 | 4.15e-01 | 94.0% | 95.0% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5041112 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.67 | 46.0 | 4.97e-01 | 74.7% | 84.3% |
| 3229482 | 71.1.1.19 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › PF25898 | 0.63 | 55.0 | 4.13e-01 | 96.4% | 86.3% |
| 3964928 | 4312.1.1.0 ↗ | a+b two layers › RelE-like › RelE-like › RelE-like | 0.61 | 44.0 | 4.43e-01 | 77.1% | 92.9% |
| 3489236 | 243.1.1.12 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like › TIM21 | 0.61 | 52.0 | 4.85e-01 | 96.4% | 100.0% |
| 3272573 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.60 | 44.0 | 4.67e-01 | 80.7% | 88.0% |
| 3559952 | 71.2.1.4 ↗ | beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › CATIP_N | 0.59 | 52.0 | 3.79e-01 | 98.8% | 37.9% |
| 4961805 | 295.1.1.55 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PF26414 | 0.59 | 43.0 | 4.41e-01 | 84.3% | 78.8% |
| 3978775 | 4200.1.1.1 ↗ | beta barrels › YmcC-like › YmcC-like › YmcC-like › YjbF | 0.59 | 51.0 | 3.96e-01 | 98.8% | 48.7% |
| 4466630 | 5.1.4.52 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sortilin-Vps10 | 0.59 | 44.0 | 2.47e-01 | 80.7% | 8.5% |
| 3270992 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.59 | 51.0 | 4.37e-01 | 100.0% | 71.4% |
| 4958640 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.58 | 52.0 | 4.12e-01 | 100.0% | 54.6% |
| 3806989 | 5.1.5.66 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 | 0.58 | 44.0 | 3.05e-01 | 80.7% | 23.9% |
| 4661118 | 218.1.1.2 ↗ | a+b two layers › Enolase-N/ribosomal protein › Enolase N-terminal domain-like › Enolase N-terminal domain-like › Enolase_N | 0.58 | 40.0 | 3.50e-01 | 71.1% | 96.0% |
| 3261183 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.58 | 51.0 | 4.02e-01 | 98.8% | 87.4% |
| 3980770 | 79.1.1.0 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain | 0.57 | 42.0 | 3.41e-01 | 90.4% | 39.4% |
| 5005613 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.57 | 43.0 | 3.67e-01 | 80.7% | 71.1% |
| 3243080 | 243.5.1.0 ↗ | a+b two layers › Cystatin-like › Amine oxidase N-terminal region › Amine oxidase N-terminal region | 0.56 | 47.0 | 4.48e-01 | 98.8% | 77.0% |
| 3744012 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.56 | 49.0 | 3.22e-01 | 97.6% | 30.0% |
| 4996177 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.56 | 43.0 | 3.84e-01 | 85.5% | 80.8% |
| 4996179 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.55 | 43.0 | 2.73e-01 | 86.7% | 21.4% |
| 4940002 | 223.1.1.122 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HisKA | 0.55 | 43.0 | 3.30e-01 | 86.7% | 53.0% |
| 2448551 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.55 | 40.0 | 3.60e-01 | 95.2% | 54.6% |
| 3246034 | 216.1.1.2 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › Autophagy_act_C | 0.55 | 41.0 | 3.51e-01 | 84.3% | 96.7% |
| 3991437 | 2003.1.5.13 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Spermine_synth | 0.54 | 44.0 | 3.25e-01 | 89.2% | 32.5% |
| 5048444 | 5.1.4.143 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF6454 | 0.54 | 46.0 | 3.30e-01 | 94.0% | 38.0% |
| 4956163 | 71.1.1.0 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB | 0.54 | 47.0 | 3.71e-01 | 98.8% | 86.7% |
| 4346250 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.54 | 42.0 | 3.58e-01 | 85.5% | 55.7% |
| 4939835 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.54 | 44.0 | 3.99e-01 | 91.6% | 88.7% |
| 3484227 | 4051.1.1.0 ↗ | a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz | 0.53 | 45.0 | 3.68e-01 | 98.8% | 65.3% |
| 5047585 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.53 | 41.0 | 3.70e-01 | 86.7% | 81.7% |
| 3428522 | 331.3.1.43 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PDF2_C | 0.53 | 44.0 | 3.30e-01 | 97.6% | 83.7% |
| 3734539 | 239.3.1.1 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain › Fasciclin | 0.52 | 39.0 | 3.21e-01 | 86.7% | 42.1% |
| 3735671 | 330.4.1.1 ↗ | a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC | 0.52 | 37.0 | 3.55e-01 | 75.9% | 71.0% |
| 4996829 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.52 | 42.0 | 2.69e-01 | 90.4% | 24.0% |
| 4537309 | 4023.1.1.0 ↗ | a+b two layers › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core › N-terminal a+b domain in DNA primase core | 0.51 | 45.0 | 4.38e-01 | 100.0% | 92.6% |
| 5048718 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.50 | 41.0 | 2.68e-01 | 92.8% | 52.4% |