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term4_saliva_scaffold_12_prodigal-single.1__X__X__00163
Bact-Virterm4_saliva_scaffold_12_prodigal-single.1__X__X__00163
Identity
- Kingdom:
- phage
Quality
70.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 48-115
Domain cluster:
representative
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d5pA00 | 3.40.1580.10 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › SMI1/KNR4-like | 0.72 | 53.0 | 4.21e-01 | 100.0% | 39.8% |
| 3tc9A02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.66 | 58.0 | 3.74e-01 | 100.0% | 43.7% |
| 3kyaA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.66 | 57.0 | 3.63e-01 | 100.0% | 39.8% |
| 3hrpA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.62 | 55.0 | 3.61e-01 | 100.0% | 40.5% |
| 2p4oA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.62 | 56.0 | 3.63e-01 | 100.0% | 28.8% |
| 3ffvA00 | 3.40.1580.20 | Alpha Beta › 3-Layer(aba) Sandwich › SMI1/KNR4-like › Syd protein | 0.62 | 47.0 | 3.49e-01 | 100.0% | 31.5% |
| 1pwaA00 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.61 | 44.0 | 3.76e-01 | 80.9% | 78.0% |
| 3e5zA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.60 | 53.0 | 3.47e-01 | 100.0% | 39.0% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.60 | 43.0 | 3.97e-01 | 92.6% | 59.1% |
| 8djfA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.59 | 52.0 | 3.48e-01 | 100.0% | 36.7% |
| 2qc5A00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 52.0 | 3.43e-01 | 100.0% | 33.6% |
| 1q7fB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.59 | 51.0 | 3.44e-01 | 100.0% | 33.3% |
| 3dsmA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.59 | 51.0 | 3.34e-01 | 100.0% | 35.5% |
| 4govA01 | 2.80.10.50 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › | 0.59 | 45.0 | 3.75e-01 | 86.8% | 74.8% |
| 1npeA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.58 | 50.0 | 3.43e-01 | 100.0% | 38.0% |
| 1ijqA01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.58 | 50.0 | 3.44e-01 | 100.0% | 37.4% |
| 3s8zA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.57 | 50.0 | 3.26e-01 | 100.0% | 29.7% |
| 3s2kB01 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.57 | 50.0 | 3.31e-01 | 100.0% | 36.1% |
| 3i24B00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.57 | 51.0 | 4.01e-01 | 98.5% | 92.1% |
| 3go5A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.56 | 41.0 | 4.14e-01 | 77.9% | 81.4% |
| 3lm4A01 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.56 | 45.0 | 3.69e-01 | 92.6% | 77.2% |
| 3bwsA02 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.55 | 47.0 | 3.09e-01 | 100.0% | 33.4% |
| 1tfkA00 | 3.10.450.200 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.54 | 40.0 | 3.70e-01 | 88.2% | 59.6% |
| 5x7qA01 | 2.60.40.1760 | Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) | 0.53 | 39.0 | 2.76e-01 | 79.4% | 61.1% |
| 3i7dA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.53 | 39.0 | 3.06e-01 | 79.4% | 88.5% |
| 2r7dA03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 38.0 | 4.09e-01 | 76.5% | 86.7% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3863134 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.71 | 53.0 | 3.40e-01 | 77.9% | 48.6% |
| 3992505 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.66 | 44.0 | 2.97e-01 | 98.5% | 18.4% |
| 3380688 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.64 | 55.0 | 3.59e-01 | 95.6% | 27.6% |
| 3464286 | 5.1.5.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF295 | 0.62 | 56.0 | 3.64e-01 | 100.0% | 35.5% |
| 3641403 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.62 | 55.0 | 3.68e-01 | 100.0% | 34.2% |
| 3514014 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.61 | 54.0 | 3.57e-01 | 100.0% | 33.0% |
| 3423257 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.61 | 54.0 | 3.36e-01 | 97.1% | 28.9% |
| 3447653 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.61 | 55.0 | 3.54e-01 | 100.0% | 33.1% |
| None | — | 0.60 | 53.0 | 3.55e-01 | 100.0% | 35.3% | |
| 2985816 | 12.3.1.19 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Gal_mutarotas_2 | 0.60 | 46.0 | 3.66e-01 | 83.8% | 65.7% |
| 4271896 | 5.1.3.18 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SdiA-regulated | 0.60 | 51.0 | 3.48e-01 | 100.0% | 40.7% |
| 3419181 | 5.1.3.144 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like | 0.60 | 54.0 | 3.51e-01 | 100.0% | 33.9% |
| 3466402 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.60 | 53.0 | 3.67e-01 | 100.0% | 51.5% |
| None | — | 0.60 | 52.0 | 3.22e-01 | 100.0% | 22.6% | |
| 3917075 | 5.1.3.140 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL, DUF5128 | 0.60 | 52.0 | 3.40e-01 | 100.0% | 33.0% |
| 3323488 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.60 | 53.0 | 3.45e-01 | 100.0% | 36.7% |
| 3485978 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.59 | 52.0 | 3.43e-01 | 100.0% | 35.6% |
| 3804813 | 5.1.3.65 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 | 0.59 | 53.0 | 3.45e-01 | 100.0% | 36.9% |
| 4425568 | 5.1.4.163 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vgb_lyase | 0.59 | 52.0 | 3.43e-01 | 100.0% | 33.9% |
| 4434299 | 5.1.4.163 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vgb_lyase | 0.59 | 52.0 | 3.42e-01 | 100.0% | 33.3% |
| 3505973 | 5.1.3.7 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL | 0.59 | 51.0 | 3.38e-01 | 100.0% | 38.1% |
| 5010183 | 5.1.3.278 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › PF29948 | 0.59 | 52.0 | 3.33e-01 | 100.0% | 32.1% |
| 3936800 | 10.1.1.92 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › PF26430 | 0.58 | 43.0 | 2.96e-01 | 77.9% | 42.9% |
| 3930104 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 51.0 | 3.43e-01 | 100.0% | 33.3% |
| 3647885 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.58 | 52.0 | 3.35e-01 | 100.0% | 52.1% |
| 3432908 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.58 | 51.0 | 3.27e-01 | 100.0% | 37.9% |
| 4003936 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 50.0 | 3.40e-01 | 100.0% | 38.1% |
| 5002442 | 5.1.3.39 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › TrAA12 | 0.58 | 51.0 | 3.23e-01 | 100.0% | 28.2% |
| 3647333 | 5.1.10.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed | 0.58 | 51.0 | 4.47e-01 | 97.1% | 75.0% |
| 3799990 | 5.1.4.258 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 | 0.58 | 50.0 | 3.15e-01 | 100.0% | 18.2% |
| 3830535 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.57 | 48.0 | 3.19e-01 | 94.1% | 40.0% |
| 3727614 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 48.0 | 3.25e-01 | 94.1% | 51.5% |
| 3806993 | 5.1.3.67 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 | 0.57 | 50.0 | 3.43e-01 | 100.0% | 57.1% |
| 5052539 | 4294.1.1.0 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like | 0.57 | 39.0 | 3.81e-01 | 80.9% | 65.3% |
| 3960750 | 6.1.1.0 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil | 0.56 | 42.0 | 3.62e-01 | 83.8% | 67.8% |
| 3414341 | 5.1.3.2 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Ldl_recept_b | 0.56 | 48.0 | 3.24e-01 | 97.1% | 26.0% |
| 3250883 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.55 | 44.0 | 3.92e-01 | 91.2% | 98.1% |
| 4187379 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.55 | 40.0 | 3.36e-01 | 97.1% | 44.2% |
| 4957480 | 5.1.4.40 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 | 0.55 | 47.0 | 2.98e-01 | 100.0% | 23.4% |
| None | — | 0.55 | 47.0 | 3.13e-01 | 100.0% | 33.3% | |
| 3495285 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.55 | 39.0 | 3.06e-01 | 85.3% | 34.7% |
| 3281754 | 101.1.2.8 ↗ | alpha arrays › HTH › HTH › winged helix domain › Trans_reg_C | 0.54 | 42.0 | 3.59e-01 | 85.3% | 73.9% |
| 3983892 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.54 | 39.0 | 3.31e-01 | 76.5% | 67.0% |
| 4376466 | 2.1.1.7 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 | 0.54 | 38.0 | 3.58e-01 | 75.0% | 89.4% |
| 4029250 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 35.0 | 3.27e-01 | 82.4% | 52.3% |
| 4951171 | 809.1.1.0 ↗ | a+b two layers › BLIP-like › beta-lactamase-inhibitor protein, BLIP › beta-lactamase-inhibitor protein, BLIP | 0.54 | 38.0 | 3.85e-01 | 98.5% | 74.3% |
| 3185909 | 394.1.1.2 ↗ | few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_19 | 0.52 | 36.0 | 4.04e-01 | 97.1% | 100.0% |
| 5048945 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.52 | 40.0 | 3.36e-01 | 85.3% | 48.0% |
| 3603731 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.52 | 36.0 | 2.99e-01 | 75.0% | 95.7% |
| 3926345 | 6.1.1.1 ↗ | beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil › FGF | 0.50 | 40.0 | 3.43e-01 | 92.6% | 71.7% |