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term4_saliva_scaffold_12_prodigal-single.1__X__X__00164
Bact-Virterm4_saliva_scaffold_12_prodigal-single.1__X__X__00164
Identity
- Kingdom:
- phage
Quality
74.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-72
Domain cluster:
rep: NC_019914.1__YP_007236617.1__G175_gp49__00049__D250-325
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4g6tA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.72 | 55.0 | 4.43e-01 | 81.2% | 81.2% |
| 3kxyJ00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.71 | 53.0 | 4.33e-01 | 81.2% | 82.2% |
| 2qmiA02 | 2.40.128.210 | Mainly Beta › Beta Barrel › Lipocalin › Pab87 octamerisation domain | 0.68 | 50.0 | 4.38e-01 | 76.8% | 58.0% |
| 3lm3A02 | 3.30.1120.110 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › | 0.66 | 45.0 | 3.88e-01 | 71.0% | 80.4% |
| 1ospO01 | 2.40.128.160 | Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) | 0.64 | 50.0 | 4.34e-01 | 84.1% | 82.9% |
| 1rypK00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.64 | 45.0 | 3.17e-01 | 72.5% | 48.0% |
| 2lfuA02 | 2.40.160.90 | Mainly Beta › Beta Barrel › Porin › | 0.61 | 51.0 | 4.17e-01 | 94.2% | 50.4% |
| 2giaB00 | 2.30.31.40 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › | 0.60 | 50.0 | 4.04e-01 | 97.1% | 71.2% |
| 7asgA01 | 2.30.180.10 | Mainly Beta › Roll › FAS1 domain › FAS1 domain | 0.59 | 52.0 | 4.23e-01 | 100.0% | 82.7% |
| 1mdcA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.59 | 50.0 | 4.17e-01 | 100.0% | 65.6% |
| 2oq1A03 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 44.0 | 3.91e-01 | 81.2% | 68.0% |
| 3a9gA00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.58 | 48.0 | 3.12e-01 | 92.8% | 87.6% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.58 | 45.0 | 3.84e-01 | 82.6% | 67.0% |
| 1vyfA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.58 | 48.0 | 4.03e-01 | 100.0% | 64.4% |
| 1mhmA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.57 | 43.0 | 3.02e-01 | 84.1% | 26.1% |
| 2c4iA01 | 2.40.128.30 | Mainly Beta › Beta Barrel › Lipocalin › Avidin-like | 0.57 | 48.0 | 4.09e-01 | 95.7% | 67.8% |
| 1plqA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.57 | 50.0 | 3.30e-01 | 94.2% | 93.4% |
| 2a0aA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 48.0 | 4.03e-01 | 100.0% | 68.7% |
| 6c1zA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 48.0 | 3.98e-01 | 100.0% | 64.5% |
| 1o8vA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.57 | 48.0 | 3.99e-01 | 100.0% | 65.4% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.56 | 44.0 | 3.03e-01 | 87.0% | 42.4% |
| 2nwvA00 | 3.30.310.110 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like | 0.56 | 41.0 | 3.62e-01 | 82.6% | 79.5% |
| 3uoaB02 | 2.60.40.3360 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 45.0 | 3.67e-01 | 91.3% | 83.1% |
| 6j8yA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.55 | 46.0 | 3.18e-01 | 94.2% | 94.2% |
| 2rcqA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 47.0 | 3.84e-01 | 100.0% | 61.7% |
| 1lfoA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.55 | 46.0 | 3.91e-01 | 100.0% | 66.9% |
| 4ntqA00 | 3.10.380.20 | Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Novel toxin 21 (CdiA), C-terminal domain | 0.54 | 37.0 | 3.59e-01 | 71.0% | 64.5% |
| 2v73A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 46.0 | 3.45e-01 | 98.6% | 50.3% |
| 2laeA00 | 3.30.310.170 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Outer membrane protein assembly factor BamC | 0.53 | 47.0 | 3.91e-01 | 97.1% | 76.3% |
| 2w38A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.53 | 43.0 | 2.96e-01 | 100.0% | 64.4% |
| 6eufA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 45.0 | 2.98e-01 | 100.0% | 34.1% |
| 3vsfC01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 43.0 | 2.81e-01 | 94.2% | 33.0% |
| 3aqoA02 | 3.30.1360.200 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.50 | 36.0 | 2.97e-01 | 78.3% | 91.5% |
| 1yuaA02 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.50 | 35.0 | 3.74e-01 | 85.5% | 87.9% |
| 3zhaQ02 | 2.30.39.10 | Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 | 0.50 | 45.0 | 3.63e-01 | 100.0% | 77.9% |
ECOD (41)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4248250 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.78 | 48.0 | 3.46e-01 | 71.0% | 23.8% |
| 3619347 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.76 | 52.0 | 4.35e-01 | 71.0% | 56.5% |
| 3505062 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.75 | 45.0 | 3.53e-01 | 71.0% | 29.0% |
| 3266554 | 331.1.1.5 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like › OGG_N | 0.74 | 50.0 | 4.79e-01 | 71.0% | 62.5% |
| 3479716 | 3459.1.1.0 ↗ | beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule | 0.73 | 46.0 | 4.32e-01 | 71.0% | 52.9% |
| 3626785 | 4041.1.1.1 ↗ | a+b complex topology › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › insertion domain in beta subunit of DNA dependent RNA-polymerase › RNA_pol_Rpb2_2 | 0.72 | 47.0 | 3.46e-01 | 75.4% | 25.6% |
| 3751257 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.68 | 47.0 | 3.74e-01 | 72.5% | 38.6% |
| 4010689 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.66 | 58.0 | 5.21e-01 | 100.0% | 98.0% |
| 3718039 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.65 | 44.0 | 3.35e-01 | 71.0% | 48.6% |
| 4856205 | 1032.1.1.2 ↗ | alpha arrays › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › Toxin A (TcdA) helical domain › TcdA_TcdB_pore, PF30720 | 0.65 | 51.0 | 3.62e-01 | 85.5% | 32.1% |
| 4295817 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.63 | 55.0 | 4.56e-01 | 100.0% | 73.1% |
| 4334199 | 77.1.1.1 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 | 0.63 | 48.0 | 4.03e-01 | 84.1% | 68.8% |
| 4100068 | 4294.1.1.1 ↗ | few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like › Rieske | 0.62 | 51.0 | 4.30e-01 | 95.7% | 92.8% |
| 3483759 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.61 | 50.0 | 4.13e-01 | 91.3% | 93.8% |
| 4984607 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.61 | 47.0 | 4.21e-01 | 82.6% | 60.0% |
| 3996508 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.60 | 51.0 | 4.10e-01 | 100.0% | 66.2% |
| 3821077 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.60 | 50.0 | 3.22e-01 | 98.6% | 20.3% |
| 3939474 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.60 | 51.0 | 4.13e-01 | 100.0% | 67.6% |
| 3567966 | 9.1.1.1 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin | 0.59 | 47.0 | 4.29e-01 | 89.9% | 64.2% |
| 4255411 | 220.1.1.126 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Ycf4 | 0.59 | 41.0 | 3.51e-01 | 72.5% | 62.7% |
| 3935139 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.58 | 41.0 | 3.31e-01 | 76.8% | 55.9% |
| 4768813 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.57 | 43.0 | 3.13e-01 | 84.1% | 30.4% |
| 3677142 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.57 | 46.0 | 2.99e-01 | 88.4% | 93.4% |
| 3648313 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.57 | 46.0 | 2.98e-01 | 88.4% | 94.6% |
| 4012524 | 109.3.1.2 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Ank,Ank_2 | 0.57 | 46.0 | 3.04e-01 | 95.7% | 47.9% |
| 4945471 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.56 | 38.0 | 3.94e-01 | 71.0% | 84.6% |
| 3517016 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.56 | 45.0 | 2.92e-01 | 88.4% | 25.1% |
| 3492352 | 216.1.1.0 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like | 0.56 | 42.0 | 3.68e-01 | 81.2% | 56.2% |
| 3975425 | 3844.1.1.1 ↗ | a+b two layers › hydrogenase expression protein-like › hydrogenase expression protein-like › hydrogenase expression protein › HupH_C | 0.56 | 42.0 | 3.71e-01 | 81.2% | 70.5% |
| 3707796 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.56 | 48.0 | 4.22e-01 | 97.1% | 68.6% |
| 4031833 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.56 | 43.0 | 4.61e-01 | 82.6% | 96.7% |
| 3384583 | 5.1.4.38 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 | 0.53 | 47.0 | 2.94e-01 | 100.0% | 29.1% |
| 3575459 | 77.2.1.1 ↗ | beta meanders › open-sided beta-meander › Histone H3 K4-specific methyltransferase SET7/9-N › Histone H3 K4-specific methyltransferase SET7/9-N › MORN | 0.53 | 42.0 | 3.39e-01 | 91.3% | 58.0% |
| 3279893 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.53 | 44.0 | 2.97e-01 | 95.7% | 40.0% |
| 2409445 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.52 | 45.0 | 2.96e-01 | 100.0% | 33.0% |
| 3406523 | 316.1.1.6 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Mab-21 | 0.52 | 44.0 | 3.19e-01 | 98.6% | 85.5% |
| 1227254 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.52 | 43.0 | 2.82e-01 | 94.2% | 34.9% |
| 3325566 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.52 | 43.0 | 2.81e-01 | 95.7% | 30.0% |
| 3453133 | 10.32.1.8 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › CBM_4_9 | 0.52 | 43.0 | 3.30e-01 | 100.0% | 55.7% |
| 3311830 | 708.1.1.7 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › DBD_Tnp_Mut | 0.51 | 43.0 | 3.55e-01 | 100.0% | 50.4% |
| 3601563 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.50 | 43.0 | 3.34e-01 | 92.8% | 61.1% |