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term4_saliva_scaffold_12_prodigal-single.1__X__X__00165
Bact-Virterm4_saliva_scaffold_12_prodigal-single.1__X__X__00165
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-129
Domain cluster:
rep: OK896991.1__UDY80742.1__X__00073__D5-103
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02452.24 best | PemK_toxin | 44.2 | 2.70e-11 | 88.6% | 83.5% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1ne8A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.88 | 78.0 | 7.77e-01 | 100.0% | 90.5% |
| 5uctB00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 68.0 | 7.23e-01 | 100.0% | 94.0% |
| 5hk0B00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 71.0 | 7.33e-01 | 100.0% | 92.5% |
| 1ub4A00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.83 | 65.0 | 6.87e-01 | 100.0% | 90.3% |
| 3jscA00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.82 | 62.0 | 6.76e-01 | 100.0% | 93.8% |
| 4rmoA00 | 3.10.129.130 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.73 | 68.0 | 6.10e-01 | 100.0% | 83.1% |
| 3meuB02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 36.0 | 4.37e-01 | 83.3% | 77.0% |
| 4atoA00 | 3.10.129.130 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.68 | 63.0 | 5.47e-01 | 100.0% | 77.4% |
| 4glkA00 | 3.10.129.130 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.65 | 60.0 | 5.26e-01 | 100.0% | 80.0% |
| 2xdbA00 | 3.10.129.130 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.64 | 58.0 | 5.19e-01 | 100.0% | 84.6% |
| 3by7E00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 40.0 | 4.69e-01 | 95.6% | 97.4% |
| 5ycqA00 | 2.30.30.390 | Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain | 0.59 | 36.0 | 4.33e-01 | 93.9% | 90.9% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.59 | 34.0 | 4.28e-01 | 85.1% | 97.0% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.56 | 33.0 | 4.22e-01 | 83.3% | 100.0% |
| 4ii1A01 | 2.30.30.1190 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 36.0 | 4.29e-01 | 84.2% | 93.8% |
| 6v4xC01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 29.0 | 3.11e-01 | 86.8% | 59.0% |
ECOD (55)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3955562 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.90 | 76.0 | 7.91e-01 | 100.0% | 94.3% |
| 2125775 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.88 | 68.0 | 7.13e-01 | 100.0% | 86.5% |
| 1109151 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.88 | 78.0 | 7.68e-01 | 100.0% | 87.5% |
| 3290144 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.87 | 59.0 | 7.00e-01 | 72.8% | 97.5% |
| 4667326 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.87 | 77.0 | 7.75e-01 | 100.0% | 91.3% |
| 3951374 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.86 | 71.0 | 7.42e-01 | 100.0% | 92.4% |
| 3587639 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.86 | 73.0 | 7.53e-01 | 100.0% | 93.5% |
| 4950222 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.85 | 74.0 | 7.54e-01 | 100.0% | 92.7% |
| 2046239 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.85 | 68.0 | 7.23e-01 | 100.0% | 94.0% |
| 1952922 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.85 | 72.0 | 7.45e-01 | 100.0% | 92.7% |
| 5045554 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.85 | 76.0 | 7.49e-01 | 100.0% | 89.1% |
| 3955085 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.84 | 68.0 | 7.31e-01 | 100.0% | 96.0% |
| 2832038 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.84 | 72.0 | 7.19e-01 | 100.0% | 88.7% |
| 2507392 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.84 | 69.0 | 6.98e-01 | 100.0% | 86.6% |
| 4645229 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.83 | 71.0 | 7.31e-01 | 100.0% | 92.7% |
| 3290347 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 65.0 | 7.01e-01 | 100.0% | 93.9% |
| 2702587 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.83 | 70.0 | 7.14e-01 | 100.0% | 90.2% |
| 4267554 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.83 | 73.0 | 7.38e-01 | 100.0% | 92.9% |
| 5027789 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.83 | 66.0 | 7.03e-01 | 100.0% | 94.0% |
| 2643543 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.83 | 76.0 | 7.43e-01 | 100.0% | 89.3% |
| 3502443 | 4.1.1.23 ↗ | beta barrels › SH3 › SH3 › SH3 › CcdB | 0.83 | 66.0 | 7.08e-01 | 100.0% | 95.0% |
| 3981828 | 4.1.1.23 ↗ | beta barrels › SH3 › SH3 › SH3 › CcdB | 0.82 | 68.0 | 7.14e-01 | 100.0% | 94.2% |
| 4928262 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.81 | 72.0 | 7.33e-01 | 100.0% | 95.5% |
| 5062749 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.80 | 71.0 | 7.13e-01 | 100.0% | 92.1% |
| 3955877 | 4.1.1.432 ↗ | beta barrels › SH3 › SH3 › SH3 › PF27466 | 0.80 | 63.0 | 6.72e-01 | 100.0% | 94.0% |
| 4008775 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.80 | 75.0 | 6.95e-01 | 100.0% | 94.3% |
| 5065801 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.79 | 66.0 | 6.89e-01 | 100.0% | 94.3% |
| 5012680 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.79 | 69.0 | 7.10e-01 | 100.0% | 94.5% |
| 3959465 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.79 | 67.0 | 6.42e-01 | 100.0% | 78.5% |
| 3965064 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.78 | 74.0 | 7.12e-01 | 100.0% | 90.4% |
| 4938225 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.78 | 65.0 | 6.82e-01 | 100.0% | 95.2% |
| 4950603 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.78 | 66.0 | 6.62e-01 | 100.0% | 87.8% |
| 4961922 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 65.0 | 6.68e-01 | 100.0% | 92.7% |
| 4969376 | 4.1.1.30 ↗ | beta barrels › SH3 › SH3 › SH3 › PemK_toxin | 0.74 | 66.0 | 6.57e-01 | 100.0% | 90.7% |
| 3728463 | 4.1.1.179 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6590 | 0.74 | 69.0 | 5.89e-01 | 100.0% | 91.4% |
| 1688342 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.73 | 68.0 | 6.08e-01 | 100.0% | 82.6% |
| 137260 | 4.1.1.23 ↗ | beta barrels › SH3 › SH3 › SH3 › CcdB | 0.72 | 59.0 | 6.12e-01 | 100.0% | 93.3% |
| 3691426 | 4.1.1.179 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6590 | 0.72 | 68.0 | 5.77e-01 | 100.0% | 91.4% |
| 3694663 | 4.1.1.179 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6590 | 0.72 | 67.0 | 5.80e-01 | 100.0% | 92.3% |
| 4018365 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 65.0 | 5.96e-01 | 100.0% | 95.2% |
| 4016602 | 4.1.1.179 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF6590 | 0.68 | 64.0 | 5.85e-01 | 100.0% | 90.9% |
| 3589730 | 4.1.1.252 ↗ | beta barrels › SH3 › SH3 › SH3 › MdcG_N | 0.67 | 41.0 | 4.80e-01 | 86.0% | 86.3% |
| 4320297 | 4.1.1.88 ↗ | beta barrels › SH3 › SH3 › SH3 › ToxN_toxin | 0.66 | 61.0 | 5.16e-01 | 100.0% | 70.3% |
| 3713571 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 44.0 | 4.56e-01 | 92.1% | 73.3% |
| 154942 | 4.1.1.88 ↗ | beta barrels › SH3 › SH3 › SH3 › ToxN_toxin | 0.65 | 60.0 | 5.26e-01 | 100.0% | 80.0% |
| 3679883 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.65 | 46.0 | 4.77e-01 | 99.1% | 79.0% |
| None | — | 0.64 | 40.0 | 2.91e-01 | 83.3% | 24.1% | |
| 3608011 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.62 | 46.0 | 4.55e-01 | 95.6% | 73.3% |
| 4000858 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.61 | 34.0 | 4.24e-01 | 83.3% | 90.0% |
| 3668787 | 4.1.1.158 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF3444 | 0.59 | 42.0 | 4.47e-01 | 92.1% | 83.0% |
| 3937006 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 37.0 | 4.34e-01 | 86.8% | 96.2% |
| 1290375 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.56 | 33.0 | 4.18e-01 | 83.3% | 98.5% |
| 3995481 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.55 | 31.0 | 3.28e-01 | 86.0% | 60.0% |
| 3707345 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.55 | 40.0 | 4.43e-01 | 83.3% | 94.4% |
| 4340107 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 34.0 | 4.00e-01 | 82.5% | 96.0% |
D2
high
residues 182-227
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2x1lB02 | 2.170.220.10 | Mainly Beta › Beta Complex › Methionyl-trna Synthetase; domain 2 › | 0.73 | 52.0 | 4.50e-01 | 97.8% | 47.4% |
| 1lrzA03 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.71 | 54.0 | 4.94e-01 | 100.0% | 62.9% |
| 2nn4A00 | 1.10.287.760 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YqgQ-like | 0.69 | 54.0 | 4.91e-01 | 97.8% | 64.5% |
| 4kjmA02 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.67 | 46.0 | 4.34e-01 | 93.5% | 60.0% |
| 6pw7A02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.67 | 52.0 | 4.64e-01 | 100.0% | 59.2% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.67 | 53.0 | 4.53e-01 | 100.0% | 53.8% |
| 2fu2A00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.66 | 51.0 | 4.31e-01 | 100.0% | 50.0% |
| 3hl6A02 | 1.20.58.700 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 57.0 | 4.28e-01 | 100.0% | 70.4% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 55.0 | 4.80e-01 | 100.0% | 97.3% |
| 5xsoA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 53.0 | 4.62e-01 | 100.0% | 75.0% |
| 4dllB02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.62 | 52.0 | 3.79e-01 | 100.0% | 33.8% |
| 2lvsA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.62 | 45.0 | 4.35e-01 | 89.1% | 69.6% |
| 6uglB02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.62 | 49.0 | 4.59e-01 | 91.3% | 70.7% |
| 4p1wD00 | 1.10.10.2570 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 47.0 | 4.24e-01 | 91.3% | 59.1% |
| 4pcqA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 46.0 | 4.53e-01 | 89.1% | 84.0% |
| 3ulqB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 47.0 | 4.50e-01 | 95.7% | 75.9% |
| 2v9kA01 | 1.10.10.2050 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.60 | 45.0 | 4.52e-01 | 89.1% | 98.0% |
| 5y2vC01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 45.0 | 3.77e-01 | 89.1% | 47.1% |
| 2vxdA00 | 1.10.10.2100 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nucleophosmin, C-terminal domain | 0.57 | 45.0 | 4.33e-01 | 91.3% | 79.6% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.57 | 40.0 | 3.47e-01 | 82.6% | 45.6% |
| 5eghB01 | 3.40.720.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alkaline Phosphatase, subunit A › Alkaline Phosphatase, subunit A | 0.56 | 48.0 | 2.96e-01 | 97.8% | 20.6% |
| 1yq1A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 46.0 | 3.57e-01 | 100.0% | 49.1% |
| 1skvA00 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.55 | 47.0 | 4.27e-01 | 100.0% | 73.4% |
| 6qwvH02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.55 | 39.0 | 3.71e-01 | 78.3% | 96.6% |
| 2janA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.54 | 43.0 | 3.56e-01 | 100.0% | 70.3% |
| 2yqyA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.53 | 45.0 | 3.33e-01 | 97.8% | 48.4% |
| 2ycdA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 43.0 | 3.36e-01 | 100.0% | 43.6% |
| 4v19W00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.51 | 46.0 | 3.10e-01 | 100.0% | 38.0% |
| 5x8tT00 | 3.90.470.10 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › Ribosomal protein L22/L17 | 0.50 | 41.0 | 3.01e-01 | 100.0% | 60.4% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3686518 | 101.1.2.384 ↗ | alpha arrays › HTH › HTH › winged helix domain › Myb_DNA-bind_8 | 0.77 | 62.0 | 5.96e-01 | 95.7% | 90.9% |
| 4981564 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.71 | 51.0 | 4.87e-01 | 78.3% | 74.5% |
| 3262464 | 102.1.1.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › SAM_1 | 0.70 | 61.0 | 5.12e-01 | 100.0% | 91.3% |
| 3714244 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.70 | 60.0 | 5.51e-01 | 100.0% | 73.3% |
| 3264274 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.70 | 54.0 | 5.29e-01 | 100.0% | 82.0% |
| 3246956 | 102.5.1.2 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › DUF4332 | 0.69 | 60.0 | 5.14e-01 | 100.0% | 82.7% |
| 3392384 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.69 | 55.0 | 4.78e-01 | 93.5% | 88.0% |
| 4926899 | 101.17.1.0 ↗ | alpha arrays › HTH › IHF-like DNA-binding proteins › IHF-like DNA-binding proteins | 0.67 | 57.0 | 4.29e-01 | 100.0% | 92.5% |
| 3590293 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.67 | 50.0 | 4.78e-01 | 84.8% | 80.0% |
| 3355429 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.65 | 53.0 | 4.81e-01 | 100.0% | 66.2% |
| 4954715 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.64 | 46.0 | 4.57e-01 | 84.8% | 74.0% |
| 5033124 | 2002.1.1.120 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM | 0.64 | 54.0 | 3.33e-01 | 100.0% | 16.7% |
| 3783341 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.63 | 46.0 | 4.69e-01 | 87.0% | 82.2% |
| 4940129 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.63 | 48.0 | 4.59e-01 | 84.8% | 74.5% |
| 4927627 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.63 | 47.0 | 3.61e-01 | 84.8% | 35.2% |
| 3761815 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.62 | 47.0 | 4.84e-01 | 93.5% | 100.0% |
| 3840064 | 192.24.1.0 ↗ | alpha bundles › Long alpha-hairpin › RPC62 helical hairpin domain › RPC62 helical hairpin domain | 0.62 | 55.0 | 4.33e-01 | 100.0% | 86.3% |
| 3969534 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.62 | 45.0 | 4.37e-01 | 80.4% | 67.3% |
| 3543275 | 101.1.1.287 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › PF28388 | 0.62 | 51.0 | 4.91e-01 | 95.7% | 83.6% |
| 3586880 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.62 | 45.0 | 4.33e-01 | 80.4% | 70.9% |
| 3837930 | 101.1.1.347 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Phage_integrase | 0.62 | 46.0 | 4.45e-01 | 84.8% | 76.4% |
| 4014713 | 2003.1.5.165 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11, Methyltransf_23 | 0.62 | 53.0 | 3.34e-01 | 100.0% | 20.8% |
| 4194508 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.60 | 44.0 | 4.26e-01 | 80.4% | 69.1% |
| 5060758 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.60 | 48.0 | 2.93e-01 | 100.0% | 19.2% |
| 3989612 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.60 | 46.0 | 4.29e-01 | 100.0% | 68.3% |
| 4167208 | 604.15.1.0 ↗ | alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like | 0.59 | 47.0 | 4.33e-01 | 95.7% | 68.3% |
| 5040788 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.59 | 40.0 | 3.72e-01 | 91.3% | 52.3% |
| 4981270 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 49.0 | 2.95e-01 | 100.0% | 20.3% |
| 4479024 | 101.1.1.58 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 | 0.58 | 41.0 | 4.09e-01 | 82.6% | 74.0% |
| 4322551 | 604.23.1.0 ↗ | alpha bundles › Spectrin repeat-like › Sbi complement-binding domain › Sbi complement-binding domain | 0.57 | 45.0 | 4.30e-01 | 95.7% | 74.5% |
| 4928493 | 873.1.1.0 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain | 0.57 | 51.0 | 3.76e-01 | 100.0% | 48.3% |
| 1125237 | 218.2.1.1 ↗ | a+b two layers › Enolase-N/ribosomal protein › Ribosomal protein L22 › Ribosomal protein L22 › Ribosomal_L22 | 0.53 | 44.0 | 3.47e-01 | 100.0% | 80.0% |
| 4945141 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.52 | 42.0 | 4.01e-01 | 93.5% | 81.8% |