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term4_saliva_scaffold_12_prodigal-single.1__X__X__00225
Bact-Virterm4_saliva_scaffold_12_prodigal-single.1__X__X__00225
Identity
- Kingdom:
- phage
Quality
76.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 86-97_240-418
Domain cluster:
rep: KX578043.1__AOT27930.1__X__00015__D87-267
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF27249.1 best | MJ0330_N | 44.8 | 1.40e-11 | 99.5% | 55.6% |
CATH (50)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o0jA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.80 | 66.0 | 5.93e-01 | 100.0% | 64.2% |
| 3dmnA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 52.0 | 5.64e-01 | 98.4% | 86.3% |
| 1gqyB02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.70 | 48.0 | 4.62e-01 | 76.4% | 60.8% |
| 3rc3A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 50.0 | 5.47e-01 | 97.4% | 89.9% |
| 1pjrA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 56.0 | 5.58e-01 | 98.4% | 82.5% |
| 5agaA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 59.0 | 5.77e-01 | 100.0% | 87.6% |
| 3i5xA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 60.0 | 5.50e-01 | 100.0% | 74.9% |
| 3u4qA04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 60.0 | 5.30e-01 | 99.0% | 79.9% |
| 3c3jA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.64 | 43.0 | 4.36e-01 | 93.7% | 67.5% |
| 4kqcA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 49.0 | 5.33e-01 | 93.7% | 96.9% |
| 7vufD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 45.0 | 4.38e-01 | 100.0% | 66.5% |
| 1pzmA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 41.0 | 4.37e-01 | 93.7% | 73.5% |
| 3hbaA01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.62 | 40.0 | 4.03e-01 | 93.7% | 62.8% |
| 8ouzD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 57.0 | 5.36e-01 | 100.0% | 89.5% |
| 8fazD01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 57.0 | 5.34e-01 | 100.0% | 87.0% |
| 5bq3A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 45.0 | 4.96e-01 | 93.7% | 93.5% |
| 1in4A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 39.0 | 4.34e-01 | 100.0% | 81.2% |
| 1gtzA00 | 3.40.50.9100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II | 0.59 | 40.0 | 4.42e-01 | 84.8% | 85.9% |
| 4hh3C02 | 3.40.50.280 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cobalamin-binding domain | 0.59 | 36.0 | 4.21e-01 | 87.4% | 86.4% |
| 4xc6B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 45.0 | 4.04e-01 | 78.0% | 72.7% |
| 6fwrA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 54.0 | 5.33e-01 | 99.0% | 99.5% |
| 4ccsA02 | 3.40.50.1400 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.59 | 37.0 | 4.45e-01 | 93.7% | 96.7% |
| 7arcP01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.58 | 44.0 | 3.91e-01 | 96.3% | 54.6% |
| 7q1bA01 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.58 | 53.0 | 4.20e-01 | 98.4% | 56.6% |
| 2pv0A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 45.0 | 4.45e-01 | 97.9% | 76.0% |
| 3ua3A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 43.0 | 4.55e-01 | 93.2% | 86.1% |
| 1m6eX02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 49.0 | 4.73e-01 | 93.7% | 88.3% |
| 3dh0B00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 44.0 | 4.44e-01 | 93.7% | 82.1% |
| 1j6uA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.56 | 42.0 | 4.10e-01 | 77.5% | 87.1% |
| 3g88A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 41.0 | 3.85e-01 | 93.7% | 60.7% |
| 7l9pE01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 46.0 | 4.48e-01 | 100.0% | 78.3% |
| 3v2bA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.56 | 46.0 | 4.75e-01 | 96.9% | 94.3% |
| 2x6qA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 38.0 | 3.79e-01 | 96.3% | 66.0% |
| 1u8zA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 39.0 | 4.22e-01 | 83.8% | 84.2% |
| 2z3vA00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.54 | 37.0 | 4.26e-01 | 96.9% | 95.6% |
| 6vssA01 | 3.40.800.10 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Ureohydrolase domain | 0.54 | 50.0 | 4.22e-01 | 99.5% | 91.3% |
| 2a35A00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 44.0 | 4.34e-01 | 86.9% | 93.3% |
| 5ailA00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.54 | 45.0 | 4.68e-01 | 96.3% | 95.6% |
| 5hvmA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 41.0 | 4.00e-01 | 78.5% | 88.9% |
| 2bkaA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 45.0 | 4.21e-01 | 89.0% | 93.9% |
| 4dkjA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 47.0 | 4.11e-01 | 97.4% | 95.3% |
| 1rz3A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 40.0 | 4.14e-01 | 80.1% | 100.0% |
| 1shuX00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.52 | 39.0 | 4.04e-01 | 94.8% | 81.8% |
| 1hdoA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 43.0 | 4.22e-01 | 87.4% | 95.6% |
| 6p8vA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 44.0 | 4.27e-01 | 100.0% | 82.0% |
| 4n03A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.51 | 40.0 | 3.91e-01 | 82.2% | 99.1% |
| 3grfA01 | 3.40.50.1370 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase | 0.51 | 32.0 | 3.68e-01 | 86.9% | 85.5% |
| 3graA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.51 | 39.0 | 4.01e-01 | 84.3% | 82.7% |
| 3gbvA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.50 | 35.0 | 4.03e-01 | 82.2% | 97.1% |
| 5l3sB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.50 | 44.0 | 4.34e-01 | 100.0% | 88.1% |
ECOD (70)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995714 | 2004.1.1.1077 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27249 | 0.82 | 79.0 | 7.18e-01 | 100.0% | 84.6% |
| 317607 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.82 | 66.0 | 5.22e-01 | 97.4% | 44.2% |
| 3942672 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.81 | 66.0 | 6.24e-01 | 97.9% | 72.3% |
| 4988088 | 2004.1.1.99 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_6N | 0.80 | 64.0 | 5.95e-01 | 97.9% | 67.7% |
| 2755868 | 2004.1.1.102 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase | 0.78 | 67.0 | 5.93e-01 | 100.0% | 63.8% |
| 3964368 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 68.0 | 6.01e-01 | 100.0% | 69.1% |
| 5082826 | 2004.1.1.117 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Terminase_3 | 0.73 | 65.0 | 6.02e-01 | 100.0% | 75.3% |
| 3587034 | 2004.1.1.102 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › TerL_ATPase | 0.73 | 67.0 | 5.46e-01 | 100.0% | 56.6% |
| 3558535 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 51.0 | 5.25e-01 | 87.4% | 76.7% |
| 3256710 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.70 | 64.0 | 5.70e-01 | 97.9% | 82.3% |
| 5031051 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.70 | 64.0 | 5.71e-01 | 100.0% | 71.2% |
| 3965712 | 2004.1.1.195 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C | 0.65 | 60.0 | 4.76e-01 | 99.5% | 94.8% |
| 3241059 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.65 | 59.0 | 5.37e-01 | 97.4% | 86.4% |
| 4521587 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.65 | 56.0 | 5.79e-01 | 94.8% | 96.7% |
| 3226728 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 59.0 | 5.55e-01 | 100.0% | 82.2% |
| 4030483 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.64 | 60.0 | 4.34e-01 | 100.0% | 38.4% |
| 4029351 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.64 | 57.0 | 5.14e-01 | 97.4% | 71.2% |
| 3709794 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.64 | 60.0 | 5.17e-01 | 100.0% | 89.3% |
| 3595349 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.64 | 59.0 | 5.30e-01 | 100.0% | 77.0% |
| 4322603 | 2007.6.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS | 0.64 | 40.0 | 4.16e-01 | 93.7% | 65.9% |
| 4190223 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.64 | 59.0 | 3.70e-01 | 97.9% | 48.9% |
| 4420366 | 2004.1.1.195 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C | 0.63 | 58.0 | 4.75e-01 | 99.0% | 96.4% |
| 3629557 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.63 | 54.0 | 4.98e-01 | 91.1% | 81.2% |
| 4026709 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.62 | 57.0 | 5.24e-01 | 97.9% | 80.8% |
| 3785074 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.62 | 57.0 | 3.76e-01 | 98.4% | 50.2% |
| 3334874 | 2004.1.1.195 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C | 0.62 | 57.0 | 4.50e-01 | 99.0% | 96.6% |
| 5067491 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 52.0 | 5.28e-01 | 100.0% | 91.1% |
| 3593028 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 43.0 | 4.88e-01 | 98.4% | 94.5% |
| 4422641 | 2004.1.1.363 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase+UvrD_C | 0.61 | 55.0 | 3.80e-01 | 95.8% | 50.4% |
| 3589232 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 57.0 | 4.33e-01 | 100.0% | 58.8% |
| 3253922 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 57.0 | 5.07e-01 | 100.0% | 81.7% |
| 4575830 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 57.0 | 4.29e-01 | 100.0% | 54.3% |
| 3385436 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.61 | 55.0 | 5.08e-01 | 95.8% | 91.7% |
| 3700609 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.60 | 56.0 | 4.94e-01 | 100.0% | 69.8% |
| 3512712 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 55.0 | 3.95e-01 | 100.0% | 42.8% |
| 3369822 | 2004.1.1.415 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, RuvB_N | 0.59 | 44.0 | 4.25e-01 | 100.0% | 67.3% |
| 4030913 | 2004.1.1.107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DnaB_C | 0.59 | 54.0 | 4.90e-01 | 100.0% | 89.5% |
| 3594600 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 41.0 | 4.24e-01 | 100.0% | 76.7% |
| 3500854 | 7529.1.1.11 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › DUF2362 | 0.58 | 52.0 | 4.20e-01 | 97.4% | 72.2% |
| 4456550 | 2004.1.1.101 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MeaB | 0.57 | 45.0 | 3.81e-01 | 82.2% | 57.8% |
| None | — | 0.57 | 44.0 | 4.28e-01 | 100.0% | 71.9% | |
| 3256466 | 2004.1.1.420 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, TIP49 | 0.57 | 44.0 | 3.92e-01 | 100.0% | 57.3% |
| 3498961 | 2006.1.5.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Hist_deacetyl | 0.57 | 52.0 | 4.16e-01 | 99.0% | 57.3% |
| 3729979 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.57 | 44.0 | 4.38e-01 | 100.0% | 78.5% |
| 3739790 | 2004.1.1.168 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SRPRB | 0.57 | 43.0 | 4.24e-01 | 77.5% | 85.5% |
| 3464895 | 2004.1.1.1107 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, Viral_helicase1, UvrD_C | 0.56 | 52.0 | 3.46e-01 | 97.9% | 38.6% |
| None | — | 0.56 | 43.0 | 4.21e-01 | 100.0% | 73.2% | |
| 3595048 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 49.0 | 4.39e-01 | 94.2% | 98.9% |
| 4569125 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 43.0 | 3.87e-01 | 100.0% | 58.1% |
| 4107417 | 2003.1.5.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › CheR | 0.56 | 49.0 | 4.84e-01 | 94.2% | 88.8% |
| 9784 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.56 | 42.0 | 4.12e-01 | 77.5% | 87.9% |
| 3276442 | 7529.1.1.11 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › DUF2362 | 0.56 | 50.0 | 4.62e-01 | 96.9% | 99.2% |
| 3457145 | 2004.1.1.462 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NBD_SMAX1 | 0.56 | 43.0 | 4.47e-01 | 100.0% | 85.6% |
| 3877788 | 2004.1.1.425 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, DUF815 | 0.56 | 43.0 | 4.31e-01 | 100.0% | 77.9% |
| 5069093 | 7512.1.1.12 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_tran_28_C | 0.55 | 37.0 | 3.74e-01 | 79.1% | 67.4% |
| 3205325 | 2004.1.1.425 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA, DUF815 | 0.55 | 42.0 | 4.30e-01 | 100.0% | 80.0% |
| 3259105 | 2003.1.5.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 | 0.55 | 38.0 | 4.20e-01 | 97.9% | 87.1% |
| 3739233 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.55 | 40.0 | 3.89e-01 | 96.3% | 65.6% |
| 4646556 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.54 | 42.0 | 4.23e-01 | 100.0% | 79.5% |
| 3835368 | 2006.1.5.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Arginase | 0.54 | 50.0 | 4.21e-01 | 99.5% | 91.4% |
| 3609341 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.54 | 44.0 | 3.85e-01 | 100.0% | 57.9% |
| 5077705 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.54 | 42.0 | 4.10e-01 | 81.7% | 88.1% |
| 3735016 | 2004.1.1.455 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase, UvrD_C, UvrD_C_2 | 0.53 | 48.0 | 3.22e-01 | 96.9% | 41.3% |
| 3266051 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.53 | 40.0 | 4.08e-01 | 100.0% | 79.5% |
| 4937668 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.53 | 41.0 | 4.11e-01 | 100.0% | 80.5% |
| 3885273 | 2004.1.1.118 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AIG1 | 0.53 | 40.0 | 3.60e-01 | 77.5% | 73.3% |
| 3601536 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.52 | 42.0 | 4.45e-01 | 95.3% | 97.0% |
| 3641126 | 2006.1.5.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › Arginase/deacetylase › Arginase | 0.52 | 47.0 | 3.89e-01 | 99.5% | 92.2% |
| 4972413 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.51 | 39.0 | 3.90e-01 | 79.6% | 83.1% |
| 4602919 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.51 | 29.0 | 3.24e-01 | 79.6% | 69.3% |
D2
high
residues 424-518
Domain cluster:
rep: SRR1747026_scaffold_22_prodigal-single.1__X__X__00117__D111-177
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3axsA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 40.0 | 2.76e-01 | 78.9% | 22.7% |
| 1pswA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 44.0 | 3.61e-01 | 93.7% | 52.3% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4640858 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.57 | 32.0 | 3.55e-01 | 71.6% | 69.3% |
| 3479367 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.53 | 31.0 | 3.52e-01 | 86.3% | 81.2% |
| 3586250 | 822.1.1.1 ↗ | a+b two layers › GYF/BRK domain-like › GYF domain › GYF domain › GYF | 0.52 | 28.0 | 3.36e-01 | 87.4% | 80.0% |
| 4992749 | 629.1.1.1 ↗ | alpha bundles › TorD-like (Pfam 06192) › TorD-like (Pfam 06192) › TorD-like (Pfam 06192) › Nitrate_red_del | 0.51 | 35.0 | 2.63e-01 | 71.6% | 45.3% |
| 3561251 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.50 | 27.0 | 3.02e-01 | 96.8% | 67.1% |
D3
high
residues 533-790
Domain cluster:
rep: rifcsphigho2-12_scaffold_combined_curated_prodigal-single.1__X__X__00331__D317-603
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5m1pB00 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.79 | 57.0 | 6.65e-01 | 92.2% | 100.0% |
| 3c6aA00 | 3.30.420.240 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.77 | 57.0 | 6.48e-01 | 98.8% | 97.5% |
| 2f7lA03 | 3.40.120.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 | 0.73 | 21.0 | 3.51e-01 | 81.0% | 67.3% |
| 2xdqB04 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.72 | 22.0 | 3.70e-01 | 75.2% | 73.4% |
| 2qi2A02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.71 | 32.0 | 4.77e-01 | 77.1% | 96.5% |
| 3vthA03 | 3.30.420.360 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.68 | 33.0 | 4.76e-01 | 87.2% | 100.0% |
| 1nbwA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.67 | 36.0 | 4.95e-01 | 73.6% | 100.0% |
| 3ttcA03 | 3.30.420.360 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › | 0.67 | 33.0 | 4.74e-01 | 87.2% | 100.0% |
| 5ybwA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.67 | 26.0 | 4.16e-01 | 81.0% | 92.9% |
| 1p5jA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.64 | 25.0 | 3.99e-01 | 86.0% | 92.7% |
| 5d84A02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 28.0 | 4.07e-01 | 87.6% | 91.9% |
| 4kt7A00 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.63 | 26.0 | 2.83e-01 | 77.9% | 42.3% |
| 2kpoA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.61 | 28.0 | 4.12e-01 | 79.5% | 97.3% |
| 3ct6A00 | 3.40.50.510 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component | 0.59 | 28.0 | 3.88e-01 | 77.5% | 87.7% |
| 4d9gA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 26.0 | 3.75e-01 | 81.4% | 90.8% |
| 3r0xA02 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.56 | 27.0 | 3.83e-01 | 89.5% | 95.1% |
| 3jvnA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.54 | 23.0 | 3.25e-01 | 81.8% | 80.3% |
| 4y9dA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 35.0 | 3.66e-01 | 93.4% | 70.2% |
| 3e66A01 | 3.30.420.230 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Prp8 RNase H domain, palm region | 0.53 | 31.0 | 3.86e-01 | 70.9% | 91.3% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4995715 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.89 | 82.0 | 8.28e-01 | 93.8% | 98.0% |
| 4929631 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.87 | 58.0 | 7.01e-01 | 93.8% | 96.7% |
| 5031052 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.81 | 62.0 | 7.00e-01 | 91.1% | 97.6% |
| 4975081 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.81 | 49.0 | 6.31e-01 | 86.8% | 100.0% |
| 4988089 | 2484.1.1.77 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_6C | 0.81 | 58.0 | 6.76e-01 | 91.1% | 98.9% |
| 3947877 | 2484.1.1.86 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TerL_nuclease | 0.78 | 61.0 | 6.81e-01 | 91.5% | 98.1% |
| 4033330 | 2484.1.1.86 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TerL_nuclease | 0.77 | 61.0 | 6.70e-01 | 93.8% | 96.7% |
| 4509605 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.76 | 36.0 | 4.83e-01 | 77.9% | 82.1% |
| 3587035 | 2484.1.1.86 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TerL_nuclease | 0.76 | 59.0 | 6.57e-01 | 97.7% | 98.1% |
| 4010072 | 2484.1.1.86 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TerL_nuclease | 0.76 | 66.0 | 6.84e-01 | 98.4% | 95.8% |
| 4031863 | 2484.1.1.86 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TerL_nuclease | 0.74 | 62.0 | 6.59e-01 | 97.3% | 95.7% |
| 4171259 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.71 | 37.0 | 4.71e-01 | 77.5% | 81.2% |
| 4524082 | 2484.1.1.76 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Terminase_3C | 0.71 | 49.0 | 5.69e-01 | 92.6% | 95.7% |
| 4974772 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.71 | 53.0 | 6.06e-01 | 76.4% | 100.0% |
| 4157094 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.65 | 24.0 | 3.65e-01 | 79.1% | 78.2% |
| 4286517 | 2010.1.1.3 ↗ | a/b three-layered sandwiches › EDD domain › EDD domain › EDD domain › EIIA-man | 0.65 | 30.0 | 4.23e-01 | 77.5% | 89.6% |
| 2483388 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.64 | 27.0 | 3.65e-01 | 88.4% | 71.1% |
| 4986127 | 2484.1.1.80 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HypF_C | 0.63 | 31.0 | 4.48e-01 | 70.9% | 100.0% |
| 4939764 | 2484.1.1.339 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › acVLRF1 | 0.63 | 32.0 | 4.52e-01 | 73.6% | 98.5% |
| 3180133 | 2484.1.1.57 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ydc2-catalyt | 0.63 | 48.0 | 4.86e-01 | 78.7% | 95.0% |
| 3352391 | 2484.1.1.103 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Tab2-like_N | 0.62 | 33.0 | 4.50e-01 | 79.5% | 100.0% |
| 4939011 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.62 | 28.0 | 3.98e-01 | 98.8% | 87.2% |
| 3561019 | 2484.5.1.3 ↗ | mixed a+b and a/b › Ribonuclease H-like › RNaseH-like domain in reverse transcriptase › RNaseH-like domain in reverse transcriptase › RT_RNaseH_2 | 0.58 | 31.0 | 4.20e-01 | 71.3% | 100.0% |
| 3413526 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.57 | 43.0 | 4.55e-01 | 94.2% | 86.7% |
| 3767654 | 2484.1.1.176 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hexokinase_1+Hexokinase_2 | 0.57 | 43.0 | 3.58e-01 | 77.1% | 86.4% |
| 4951427 | 2007.1.14.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Chelatase-like › Oxidored_nitro | 0.55 | 26.0 | 3.56e-01 | 76.4% | 88.3% |
| 3985289 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.53 | 33.0 | 3.72e-01 | 92.6% | 79.5% |
| 3886006 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.51 | 27.0 | 3.49e-01 | 86.4% | 86.7% |
D4
medium
residues 3-41
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3rfwA01 | 1.10.8.1040 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.73 | 63.0 | 5.43e-01 | 97.4% | 88.5% |
| 3rylA02 | 1.10.720.170 | Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.51 | 37.0 | 3.18e-01 | 92.3% | 98.8% |
D5
medium
residues 100-151_217-238
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4o1sA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.88 | 82.0 | 6.12e-01 | 100.0% | 97.6% |
| 2imzA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.86 | 78.0 | 6.10e-01 | 95.9% | 100.0% |
| 1zdeA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.86 | 80.0 | 6.04e-01 | 100.0% | 93.8% |
| 1am2A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.80 | 74.0 | 5.40e-01 | 98.6% | 99.4% |
| 1at0A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.80 | 74.0 | 5.83e-01 | 100.0% | 99.3% |
| 6vgwA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.76 | 69.0 | 5.48e-01 | 98.6% | 98.6% |
| 4g54A01 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.61 | 44.0 | 3.73e-01 | 77.0% | 76.0% |
| 3k6yA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 44.0 | 3.95e-01 | 82.4% | 86.0% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 40.0 | 4.02e-01 | 85.1% | 72.6% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 39.0 | 4.30e-01 | 85.1% | 94.6% |
| 4ic5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.57 | 42.0 | 3.88e-01 | 82.4% | 80.8% |
| 3mr0A01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.57 | 41.0 | 3.71e-01 | 79.7% | 85.5% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.57 | 39.0 | 4.08e-01 | 94.6% | 80.3% |
| 7a6pB01 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.56 | 41.0 | 3.48e-01 | 81.1% | 71.7% |
| 5bncB01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 46.0 | 3.73e-01 | 95.9% | 80.5% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 40.0 | 3.31e-01 | 79.7% | 81.0% |
| 6euaA01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.54 | 41.0 | 3.35e-01 | 81.1% | 70.5% |
| 4lduA03 | 2.30.30.1040 | Mainly Beta › Roll › SH3 type barrels. › | 0.54 | 37.0 | 3.84e-01 | 70.3% | 88.2% |
| 1h7zA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.54 | 38.0 | 2.92e-01 | 75.7% | 82.7% |
| 1io1A02 | 2.170.280.10 | Mainly Beta › Beta Complex › f41 fragment of flagellin, middle domain › f41 fragment of flagellin, middle domain | 0.53 | 36.0 | 3.11e-01 | 71.6% | 60.3% |
| 2odpA03 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 45.0 | 3.54e-01 | 97.3% | 87.3% |
| 3voqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 36.0 | 3.19e-01 | 71.6% | 73.3% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.53 | 41.0 | 3.46e-01 | 87.8% | 87.7% |
| 1khcA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 40.0 | 4.21e-01 | 93.2% | 93.8% |
| 3plsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 39.0 | 3.47e-01 | 79.7% | 99.0% |
| 5yzzC00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.52 | 43.0 | 3.84e-01 | 95.9% | 74.8% |
| 2greF02 | 2.40.30.40 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 | 0.51 | 39.0 | 3.89e-01 | 83.8% | 92.3% |
| 3qnfC01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.51 | 38.0 | 2.84e-01 | 82.4% | 94.6% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5023539 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.92 | 84.0 | 6.38e-01 | 95.9% | 100.0% |
| 4998394 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 75.0 | 5.70e-01 | 90.5% | 100.0% |
| 4978263 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 82.0 | 6.11e-01 | 100.0% | 97.6% |
| 4984220 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 78.0 | 5.96e-01 | 95.9% | 100.0% |
| 4872043 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 81.0 | 6.22e-01 | 100.0% | 97.3% |
| 4993128 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 80.0 | 6.07e-01 | 100.0% | 98.1% |
| 4335483 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 80.0 | 5.48e-01 | 100.0% | 100.0% |
| 5030847 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 79.0 | 5.97e-01 | 100.0% | 93.8% |
| 4565870 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 79.0 | 6.03e-01 | 100.0% | 96.1% |
| 4993808 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 76.0 | 5.95e-01 | 97.3% | 99.3% |
| 4992473 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 78.0 | 5.79e-01 | 100.0% | 92.4% |
| 4993454 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 77.0 | 5.28e-01 | 100.0% | 98.3% |
| 4544734 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.80 | 74.0 | 5.17e-01 | 98.6% | 100.0% |
| 4342207 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.79 | 72.0 | 5.63e-01 | 100.0% | 100.0% |
| 3484822 | 4.1.1.34 ↗ | beta barrels › SH3 › SH3 › SH3 › MBT | 0.59 | 44.0 | 4.36e-01 | 90.5% | 75.0% |
| 3218198 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 40.0 | 4.42e-01 | 79.7% | 94.5% |
| 3616243 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 38.0 | 4.26e-01 | 87.8% | 89.1% |
| 5048058 | 223.1.1.25 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 | 0.58 | 43.0 | 3.83e-01 | 79.7% | 83.6% |
| 3576940 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 40.0 | 2.86e-01 | 71.6% | 33.8% |
| 4246607 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.57 | 42.0 | 4.01e-01 | 90.5% | 68.2% |
| 3500342 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.56 | 38.0 | 3.55e-01 | 87.8% | 56.7% |
| 4985159 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.56 | 47.0 | 3.76e-01 | 98.6% | 69.1% |
| 3768094 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.54 | 39.0 | 3.48e-01 | 77.0% | 56.2% |
| 3818376 | 1.1.11.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239 | 0.53 | 45.0 | 3.93e-01 | 97.3% | 69.6% |
| 3492288 | 376.1.1.29 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_4 | 0.53 | 38.0 | 3.33e-01 | 87.8% | 50.9% |
| 3803728 | 1.1.11.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like | 0.53 | 44.0 | 3.55e-01 | 95.9% | 60.1% |
| 3909175 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.52 | 45.0 | 3.11e-01 | 100.0% | 58.2% |
| 4942673 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.52 | 39.0 | 3.50e-01 | 82.4% | 58.2% |
| 3812301 | 1.1.11.6 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › PF31239 | 0.52 | 43.0 | 3.90e-01 | 97.3% | 77.3% |
| 1217180 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.52 | 45.0 | 3.02e-01 | 100.0% | 54.4% |
| 3280641 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.51 | 41.0 | 3.82e-01 | 93.2% | 94.0% |
| 3832176 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.51 | 41.0 | 4.21e-01 | 90.5% | 95.7% |
| 2559791 | 4187.2.1.1 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA | 0.50 | 39.0 | 3.71e-01 | 89.2% | 89.5% |
| 3318678 | 1.1.11.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › B3 | 0.50 | 42.0 | 3.71e-01 | 95.9% | 67.8% |
| 3341364 | 1.1.11.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like | 0.50 | 42.0 | 3.61e-01 | 97.3% | 66.7% |
D6
medium
residues 152-216
Domain cluster:
rep: hypothetical_protein_MAR_ORF201__YP_003406942__Marseillevirus_marseillevirus__694581__D48-102
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dq3A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.90 | 83.0 | 5.90e-01 | 100.0% | 46.3% |
| 4e2tB00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.90 | 83.0 | 5.95e-01 | 100.0% | 46.7% |
| 6vgwA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.87 | 78.0 | 5.92e-01 | 100.0% | 44.7% |
| 2lwyA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.87 | 80.0 | 6.15e-01 | 100.0% | 49.3% |
| 4o1sA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.86 | 79.0 | 5.69e-01 | 100.0% | 44.1% |
| 1am2A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.86 | 78.0 | 5.58e-01 | 100.0% | 60.8% |
| 1mi8A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.85 | 77.0 | 5.91e-01 | 100.0% | 48.9% |
| 2cw8A01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.84 | 76.0 | 5.54e-01 | 100.0% | 45.0% |
| 1at0A00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.84 | 76.0 | 5.79e-01 | 100.0% | 55.2% |
| 1zdeA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.84 | 77.0 | 5.64e-01 | 100.0% | 49.4% |
| 5o9iA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.84 | 75.0 | 5.49e-01 | 100.0% | 46.8% |
| 2imzA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.83 | 76.0 | 5.79e-01 | 100.0% | 54.2% |
| 2jmzA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.83 | 74.0 | 5.45e-01 | 100.0% | 44.0% |
| 2lcjA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.81 | 72.0 | 5.19e-01 | 100.0% | 51.9% |
| 4iauA01 | 2.60.20.10 | Mainly Beta › Sandwich › Gamma-B Crystallin; domain 1 › Crystallins | 0.70 | 40.0 | 3.77e-01 | 89.2% | 46.2% |
| 1yn3A00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.65 | 41.0 | 3.59e-01 | 89.2% | 42.9% |
| 3dlqR02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 42.0 | 3.67e-01 | 90.8% | 43.0% |
| 6vtmB00 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.65 | 42.0 | 3.71e-01 | 90.8% | 44.8% |
| 2lc1A00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.65 | 52.0 | 4.54e-01 | 89.2% | 100.0% |
| 2pwyA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.60 | 46.0 | 4.85e-01 | 83.1% | 100.0% |
| 4jonC00 | 2.60.200.20 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.60 | 49.0 | 4.19e-01 | 96.9% | 97.5% |
| 3l5iA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 29.0 | 2.65e-01 | 93.8% | 33.0% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 41.0 | 4.13e-01 | 86.2% | 72.7% |
| 1i9gA01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.57 | 44.0 | 4.51e-01 | 84.6% | 90.6% |
| 3uc1A00 | 2.120.10.90 | Mainly Beta › 6 Propeller › Neuraminidase › DNA gyrase/topoisomerase IV, subunit A, C-terminal | 0.57 | 50.0 | 3.20e-01 | 95.4% | 27.0% |
| 6m3aA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 39.0 | 3.98e-01 | 89.2% | 72.7% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.57 | 44.0 | 3.71e-01 | 90.8% | 49.5% |
| 3zpeA00 | 2.60.90.50 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › | 0.56 | 41.0 | 3.18e-01 | 87.7% | 36.2% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.56 | 40.0 | 4.01e-01 | 84.6% | 72.7% |
| 3mb5A01 | 3.10.330.20 | Alpha Beta › Roll › Vcp-like ATPase; Chain A, domain 2 › | 0.56 | 44.0 | 4.56e-01 | 87.7% | 93.5% |
| 2j73A00 | 2.60.40.1110 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.56 | 41.0 | 3.52e-01 | 90.8% | 49.5% |
| 4a4yA01 | 2.60.200.50 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.56 | 45.0 | 4.03e-01 | 93.8% | 100.0% |
| 1bquA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 39.0 | 3.40e-01 | 92.3% | 48.0% |
| 4jzjC02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 3.64e-01 | 90.8% | 51.9% |
| 1qr4A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 37.0 | 3.43e-01 | 87.7% | 55.2% |
| 2ra2B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 43.0 | 4.56e-01 | 92.3% | 100.0% |
| 2rhqB03 | 3.50.40.10 | Alpha Beta › 3-Layer(bba) Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 3 › Phenylalanyl-trna Synthetase, Chain B, domain 3 | 0.53 | 37.0 | 2.68e-01 | 73.8% | 66.3% |
| 3omzA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 42.0 | 3.69e-01 | 90.8% | 66.7% |
| 4a0tA03 | 2.60.320.30 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › | 0.52 | 40.0 | 3.67e-01 | 87.7% | 100.0% |
| 6kxkG01 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.52 | 40.0 | 3.35e-01 | 90.8% | 100.0% |
| 4kh9B02 | 2.60.40.1930 | Mainly Beta › Sandwich › Immunoglobulin-like › Macroglobulin (MG2) domain | 0.52 | 37.0 | 3.19e-01 | 89.2% | 45.1% |
| 7sz2A01 | 3.30.720.50 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.52 | 42.0 | 3.82e-01 | 92.3% | 89.1% |
| 3in6A02 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 41.0 | 3.36e-01 | 90.8% | 47.9% |
| 2j4xA01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 45.0 | 3.63e-01 | 96.9% | 99.2% |
| 1a21A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 38.0 | 3.36e-01 | 90.8% | 53.1% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.51 | 41.0 | 3.63e-01 | 90.8% | 59.4% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 39.0 | 3.38e-01 | 89.2% | 52.9% |
| 3bh1A03 | 3.40.140.40 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Domain of unknown function (DUF1846), C-terminal subdomain | 0.51 | 42.0 | 3.30e-01 | 92.3% | 89.0% |
| 1u60A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.51 | 37.0 | 2.46e-01 | 78.5% | 92.2% |
| 2fg9A01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 39.0 | 3.02e-01 | 89.2% | 35.8% |
| 4zciA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 36.0 | 3.19e-01 | 78.5% | 54.5% |
| 6rptC00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 38.0 | 3.21e-01 | 90.8% | 48.2% |
ECOD (90)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002632 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.91 | 85.0 | 6.30e-01 | 100.0% | 49.0% |
| 5023539 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.91 | 84.0 | 6.20e-01 | 100.0% | 44.5% |
| 5065032 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.91 | 85.0 | 6.11e-01 | 100.0% | 49.7% |
| 4039971 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.91 | 84.0 | 5.96e-01 | 100.0% | 46.9% |
| 4983458 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.90 | 83.0 | 6.02e-01 | 100.0% | 46.1% |
| 5013038 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 83.0 | 6.03e-01 | 100.0% | 41.9% |
| 5014854 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.89 | 82.0 | 5.53e-01 | 100.0% | 56.3% |
| 4979524 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 82.0 | 5.33e-01 | 100.0% | 62.8% |
| 4943231 | 69.1.1.16 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › ATP-synt_ab | 0.89 | 82.0 | 5.78e-01 | 100.0% | 48.3% |
| 5052154 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.89 | 82.0 | 5.93e-01 | 100.0% | 46.7% |
| 5078549 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.89 | 82.0 | 5.98e-01 | 100.0% | 45.0% |
| 4930433 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.89 | 81.0 | 6.02e-01 | 100.0% | 50.3% |
| 4629526 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.89 | 82.0 | 5.12e-01 | 100.0% | 74.5% |
| 4335483 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.89 | 82.0 | 5.46e-01 | 100.0% | 61.8% |
| 4977673 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 81.0 | 5.43e-01 | 100.0% | 65.8% |
| 4998392 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 81.0 | 5.90e-01 | 100.0% | 59.4% |
| 3604383 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.88 | 81.0 | 5.49e-01 | 100.0% | 62.3% |
| 4993808 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 81.0 | 6.09e-01 | 100.0% | 51.7% |
| 3604113 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.88 | 80.0 | 6.08e-01 | 100.0% | 49.7% |
| 4872043 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.88 | 81.0 | 6.05e-01 | 100.0% | 48.7% |
| 5031634 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.88 | 80.0 | 5.89e-01 | 100.0% | 49.4% |
| 4933756 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.88 | 80.0 | 6.12e-01 | 100.0% | 55.0% |
| 4975578 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 80.0 | 5.14e-01 | 100.0% | 26.5% |
| 4982797 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.87 | 80.0 | 6.06e-01 | 100.0% | 51.7% |
| 5022295 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 80.0 | 5.82e-01 | 100.0% | 44.2% |
| 4993813 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 80.0 | 5.86e-01 | 100.0% | 45.6% |
| 4971400 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 79.0 | 5.03e-01 | 100.0% | 24.7% |
| 2524072 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.87 | 80.0 | 5.75e-01 | 100.0% | 46.5% |
| 259963 | 69.1.1.3 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT | 0.87 | 80.0 | 6.15e-01 | 100.0% | 49.3% |
| 5030499 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.87 | 80.0 | 5.97e-01 | 100.0% | 54.0% |
| 4993128 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 79.0 | 5.83e-01 | 100.0% | 53.8% |
| 4998394 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 80.0 | 5.92e-01 | 100.0% | 58.1% |
| 4993853 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.87 | 79.0 | 5.75e-01 | 100.0% | 46.1% |
| 4948019 | 69.1.1.17 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › MCM | 0.87 | 79.0 | 5.66e-01 | 100.0% | 49.1% |
| 4993871 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 73.0 | 5.91e-01 | 90.8% | 61.7% |
| 4945569 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 79.0 | 5.85e-01 | 100.0% | 51.6% |
| 4594307 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.86 | 79.0 | 5.68e-01 | 100.0% | 50.6% |
| 3257888 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.86 | 78.0 | 5.88e-01 | 100.0% | 56.0% |
| 5028312 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.86 | 79.0 | 6.03e-01 | 100.0% | 48.6% |
| 4586920 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 78.0 | 5.79e-01 | 100.0% | 54.8% |
| 2636473 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.86 | 77.0 | 5.84e-01 | 100.0% | 44.1% |
| 4993732 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 76.0 | 6.03e-01 | 100.0% | 50.4% |
| 4291841 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 78.0 | 5.68e-01 | 100.0% | 40.6% |
| 4180552 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 78.0 | 5.68e-01 | 100.0% | 63.0% |
| 4979631 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.85 | 77.0 | 5.81e-01 | 100.0% | 44.7% |
| 4932851 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.85 | 78.0 | 6.04e-01 | 100.0% | 83.0% |
| 5029355 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 76.0 | 5.75e-01 | 100.0% | 52.0% |
| 5013937 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.85 | 77.0 | 5.64e-01 | 100.0% | 47.9% |
| 4070999 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.84 | 76.0 | 5.69e-01 | 100.0% | 51.6% |
| 4940699 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.84 | 77.0 | 5.71e-01 | 100.0% | 48.4% |
| 4984220 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 76.0 | 5.66e-01 | 100.0% | 48.4% |
| 4994372 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 76.0 | 6.13e-01 | 100.0% | 55.0% |
| 4971412 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 76.0 | 5.42e-01 | 100.0% | 50.0% |
| 2323756 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.84 | 75.0 | 5.59e-01 | 100.0% | 58.2% |
| 3518586 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.83 | 75.0 | 5.22e-01 | 100.0% | 39.5% |
| 5029854 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 75.0 | 5.18e-01 | 100.0% | 52.9% |
| 4457379 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.83 | 75.0 | 5.74e-01 | 100.0% | 46.9% |
| 3952464 | 242.1.1.0 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases | 0.83 | 75.0 | 5.73e-01 | 100.0% | 46.9% |
| 4127166 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.83 | 75.0 | 5.66e-01 | 100.0% | 57.3% |
| 3282306 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 74.0 | 5.80e-01 | 100.0% | 49.6% |
| 3517362 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.82 | 74.0 | 5.68e-01 | 100.0% | 54.2% |
| 3934143 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.82 | 73.0 | 5.67e-01 | 100.0% | 56.4% |
| 4243055 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.82 | 73.0 | 5.16e-01 | 100.0% | 41.0% |
| 3861422 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.82 | 74.0 | 5.22e-01 | 100.0% | 42.1% |
| 2553113 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 74.0 | 5.86e-01 | 100.0% | 53.1% |
| 3215378 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.82 | 73.0 | 5.55e-01 | 100.0% | 58.7% |
| 4152516 | 69.1.1.0 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint | 0.82 | 73.0 | 5.74e-01 | 100.0% | 54.8% |
| 3690149 | 69.1.1.5 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Vint | 0.81 | 57.0 | 4.12e-01 | 73.8% | 29.9% |
| 3230518 | 69.1.1.1 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint | 0.81 | 73.0 | 5.45e-01 | 100.0% | 55.5% |
| 3603738 | 69.1.1.4 ↗ | beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Intein_splicing | 0.81 | 73.0 | 5.61e-01 | 100.0% | 86.4% |
| 3725727 | 3792.1.1.0 ↗ | beta sandwiches › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain › 26S proteasome subunit Rpn2 C-terminal domain | 0.78 | 45.0 | 4.05e-01 | 89.2% | 43.5% |
| 3233041 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.64 | 53.0 | 4.37e-01 | 92.3% | 88.2% |
| 3603304 | 284.1.1.0 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like | 0.62 | 47.0 | 4.99e-01 | 83.1% | 98.2% |
| 3753826 | 11.1.1.396 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Anth_Ig | 0.62 | 45.0 | 4.06e-01 | 93.8% | 56.7% |
| 3736190 | 4.1.1.302 ↗ | beta barrels › SH3 › SH3 › SH3 › tSH3-B_UBE2O | 0.61 | 47.0 | 2.85e-01 | 87.7% | 20.6% |
| 3319401 | 2487.1.1.0 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" | 0.60 | 48.0 | 3.83e-01 | 87.7% | 100.0% |
| 3555174 | 73.1.1.1 ↗ | beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA | 0.60 | 47.0 | 4.17e-01 | 92.3% | 99.0% |
| 5067899 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 41.0 | 3.60e-01 | 90.8% | 49.5% |
| 3717155 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.58 | 44.0 | 3.57e-01 | 86.2% | 86.4% |
| 3643102 | 2487.1.1.7 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA | 0.58 | 47.0 | 3.70e-01 | 90.8% | 100.0% |
| 139162 | 284.1.1.9 ↗ | a+b two layers › FKBP-like › FKBP-like › FKBP-like › TrmI-like_N | 0.55 | 44.0 | 4.55e-01 | 87.7% | 93.4% |
| 2557227 | 4.7.1.2 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF | 0.55 | 43.0 | 4.05e-01 | 86.2% | 70.1% |
| 5059693 | 5.2.1.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-pinwheel › beta-pinwheel › DNA_gyraseA_C | 0.55 | 47.0 | 3.07e-01 | 95.4% | 30.3% |
| 4021279 | 10.32.1.52 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GH115_C | 0.54 | 45.0 | 3.16e-01 | 89.2% | 50.0% |
| 3786396 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.54 | 46.0 | 3.65e-01 | 93.8% | 65.4% |
| 4181066 | 240.2.1.0 ↗ | a+b complex topology › Ribosomal protein TL5/L25 C-terminal domain-like › Insert subdomain of RNA polymerase alpha subunit › Insert subdomain of RNA polymerase alpha subunit | 0.54 | 41.0 | 3.53e-01 | 86.2% | 90.0% |
| 4959031 | 11.4.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) | 0.52 | 41.0 | 3.31e-01 | 89.2% | 44.8% |
| 5055413 | 10.20.1.0 ↗ | beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease | 0.51 | 37.0 | 2.98e-01 | 89.2% | 39.2% |
| 3352566 | 2487.1.1.7 ↗ | a/b three-layered sandwiches › "The ""swivelling"" beta/beta/alpha domains" › "The ""swivelling"" beta/beta/alpha domain" › "The ""swivelling"" beta/beta/alpha domain" › PA | 0.51 | 40.0 | 2.85e-01 | 87.7% | 96.1% |
| 4368632 | 10.32.1.266 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › GldH_lipo | 0.50 | 42.0 | 3.29e-01 | 92.3% | 75.5% |