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term4_saliva_scaffold_1_prodigal-single.1XX__00031

Bact-Vir

term4_saliva_scaffold_1_prodigal-single.1__X__X__00031

Identity

Kingdom:: phage

Quality

81.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 99-275

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04203.19 best	Sortase	44.7	1.50e-11	84.8%	81.6%

CATH (9)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
5k9aA00	2.40.260.10	Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase	0.88	64.0	5.96e-01	88.1%	61.4%
3fn5B00	2.40.260.10	Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase	0.83	64.0	6.66e-01	99.4%	85.3%
4d70A00	2.40.260.10	Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase	0.71	62.0	6.58e-01	99.4%	100.0%
2w1jA00	2.40.260.10	Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase	0.68	65.0	6.26e-01	99.4%	99.0%
4ux7A00	2.40.260.10	Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase	0.66	62.0	5.87e-01	98.9%	94.1%
4j3cA01	2.40.240.20	Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1	0.65	26.0	3.97e-01	90.4%	95.3%
1feuA01	2.40.240.10	Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P	0.60	32.0	4.24e-01	83.6%	98.9%
5c94A00	2.40.10.250	Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9	0.57	28.0	3.39e-01	85.3%	69.0%
5xd6B01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.55	30.0	4.02e-01	70.6%	100.0%

ECOD (15)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4953572	290.1.1.1 ↗	beta barrels › Sortase › Sortase › Sortase › Sortase	0.88	62.0	7.12e-01	89.3%	93.3%
3503399	290.1.1.1 ↗	beta barrels › Sortase › Sortase › Sortase › Sortase	0.82	64.0	7.11e-01	89.3%	98.6%
3589952	290.1.1.1 ↗	beta barrels › Sortase › Sortase › Sortase › Sortase	0.72	67.0	6.57e-01	100.0%	92.4%
4102870	290.1.1.1 ↗	beta barrels › Sortase › Sortase › Sortase › Sortase	0.67	65.0	5.84e-01	100.0%	78.5%
4952629	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.62	35.0	4.52e-01	87.0%	97.0%
4952429	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.61	35.0	4.48e-01	87.0%	97.0%
4952430	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.59	37.0	4.54e-01	99.4%	100.0%
3833385	206.1.1.20 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr	0.58	28.0	3.06e-01	97.2%	52.7%
5043613	1.1.9.23 ↗	beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473	0.57	33.0	3.86e-01	89.3%	79.2%
5006840	1.1.9.23 ↗	beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473	0.57	33.0	3.80e-01	89.8%	77.5%
4939497	1.1.9.23 ↗	beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473	0.56	33.0	3.84e-01	89.3%	80.8%
4988096	1.1.13.0 ↗	beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins	0.53	34.0	4.15e-01	87.0%	98.2%
3350184	206.1.1.1 ↗	a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase	0.52	38.0	2.94e-01	75.1%	49.6%
3617194	864.1.1.0 ↗	a+b two layers › DLC › DLC › DLC	0.51	34.0	3.83e-01	76.3%	89.2%
3242151	12.1.1.0 ↗	beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain	0.50	27.0	3.16e-01	77.4%	71.2%