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term4_saliva_scaffold_1_prodigal-single.1__X__X__00033
Bact-Virterm4_saliva_scaffold_1_prodigal-single.1__X__X__00033
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 110-223
Domain cluster:
rep: SRR1747018_scaffold_0_prodigal-single.1__X__X__00234__D35-189
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10502.15 best | Peptidase_S26 | 44.5 | 2.20e-11 | 80.7% | 53.0% |
CATH (4)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4k8wA00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.76 | 62.0 | 6.16e-01 | 100.0% | 82.2% |
| 4me8A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.65 | 59.0 | 5.88e-01 | 97.4% | 93.2% |
| 5f3yA05 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 35.0 | 4.16e-01 | 100.0% | 92.2% |
| 1rwzA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.54 | 43.0 | 3.38e-01 | 85.1% | 92.6% |
ECOD (26)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028922 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.91 | 59.0 | 5.48e-01 | 100.0% | 55.6% |
| 3266698 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.91 | 59.0 | 5.54e-01 | 100.0% | 56.3% |
| 3381699 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.89 | 58.0 | 5.17e-01 | 100.0% | 50.0% |
| 3623159 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.89 | 57.0 | 5.77e-01 | 100.0% | 65.2% |
| 3668886 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.87 | 56.0 | 5.37e-01 | 100.0% | 57.7% |
| 3175036 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.86 | 58.0 | 5.21e-01 | 100.0% | 52.0% |
| 3481729 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.86 | 59.0 | 5.80e-01 | 100.0% | 66.7% |
| 3933131 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.84 | 58.0 | 5.70e-01 | 100.0% | 66.7% |
| 3667393 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.78 | 67.0 | 5.72e-01 | 100.0% | 60.6% |
| 1323508 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.77 | 63.0 | 5.86e-01 | 100.0% | 70.3% |
| 3354459 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.77 | 56.0 | 5.61e-01 | 74.6% | 74.8% |
| 4544733 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.76 | 71.0 | 5.90e-01 | 100.0% | 66.3% |
| 4229196 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.76 | 72.0 | 6.29e-01 | 100.0% | 76.2% |
| 5035321 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.75 | 66.0 | 5.87e-01 | 100.0% | 68.4% |
| 3689234 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.74 | 62.0 | 5.31e-01 | 100.0% | 58.2% |
| 3967548 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.73 | 62.0 | 5.28e-01 | 100.0% | 58.0% |
| 4182690 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.73 | 69.0 | 5.94e-01 | 100.0% | 69.4% |
| 3974126 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.73 | 69.0 | 5.56e-01 | 100.0% | 66.2% |
| 4032535 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.70 | 60.0 | 5.20e-01 | 100.0% | 61.8% |
| 3963855 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.69 | 65.0 | 5.03e-01 | 100.0% | 71.6% |
| 4255495 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.67 | 62.0 | 4.72e-01 | 100.0% | 53.2% |
| 4303959 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.67 | 58.0 | 5.18e-01 | 96.5% | 67.7% |
| 4252291 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.66 | 61.0 | 5.13e-01 | 100.0% | 62.2% |
| 3989651 | 4.11.1.2 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 | 0.65 | 61.0 | 4.98e-01 | 100.0% | 67.8% |
| None | — | 0.65 | 61.0 | 5.25e-01 | 100.0% | 72.9% | |
| 3180573 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 34.0 | 3.74e-01 | 96.5% | 77.9% |
D2
medium
residues 28-45_63-105