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term4_saliva_scaffold_1_prodigal-single.1__X__X__00034
Bact-Virterm4_saliva_scaffold_1_prodigal-single.1__X__X__00034
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-107
Domain cluster:
rep: IMGVR_UViG_638276918_000001-638276918-638305645__D148-283
CATH (71)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jqlB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.75 | 68.0 | 6.17e-01 | 100.0% | 84.3% |
| 1r6bX04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 63.0 | 5.15e-01 | 100.0% | 72.1% |
| 3u61C01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.71 | 63.0 | 5.48e-01 | 100.0% | 69.1% |
| 5kwaA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 61.0 | 5.27e-01 | 100.0% | 71.6% |
| 3t15A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 62.0 | 5.42e-01 | 100.0% | 73.5% |
| 2c9oA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.69 | 61.0 | 4.95e-01 | 100.0% | 70.0% |
| 2qbyB02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 60.0 | 5.08e-01 | 100.0% | 83.4% |
| 1a5tA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 60.0 | 5.14e-01 | 100.0% | 82.0% |
| 2gnoA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.67 | 59.0 | 5.46e-01 | 100.0% | 86.0% |
| 3sylA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 58.0 | 4.77e-01 | 100.0% | 64.3% |
| 8alzB05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 57.0 | 4.63e-01 | 100.0% | 82.0% |
| 4n1aB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.64 | 57.0 | 4.11e-01 | 100.0% | 54.9% |
| 4iqyB00 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.64 | 55.0 | 4.33e-01 | 94.2% | 77.6% |
| 7uehA01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.64 | 39.0 | 3.75e-01 | 70.2% | 52.1% |
| 2w3pA02 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.64 | 44.0 | 3.44e-01 | 71.2% | 68.3% |
| 3n70A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 55.0 | 5.04e-01 | 100.0% | 80.3% |
| 5kivA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.63 | 54.0 | 4.43e-01 | 94.2% | 93.1% |
| 2o0jA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 55.0 | 4.23e-01 | 100.0% | 61.8% |
| 8dgfB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 56.0 | 4.60e-01 | 100.0% | 64.9% |
| 4g9pA01 | 3.20.20.20 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Dihydropteroate synthase-like | 0.63 | 53.0 | 3.98e-01 | 97.1% | 90.2% |
| 3bgvD00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.63 | 52.0 | 3.95e-01 | 93.3% | 79.1% |
| 7f8aA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 53.0 | 4.53e-01 | 94.2% | 86.0% |
| 7upvA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.62 | 53.0 | 3.62e-01 | 97.1% | 99.8% |
| 2uvaG04 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 55.0 | 4.02e-01 | 99.0% | 74.4% |
| 4mzyA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.62 | 49.0 | 4.26e-01 | 87.5% | 91.7% |
| 2uyoA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 51.0 | 3.88e-01 | 94.2% | 66.2% |
| 2lndA00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.62 | 46.0 | 4.52e-01 | 100.0% | 73.2% |
| 2r6fA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 55.0 | 4.53e-01 | 100.0% | 72.0% |
| 1gm5A05 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 52.0 | 4.57e-01 | 96.2% | 92.0% |
| 4cw9B00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.61 | 35.0 | 3.58e-01 | 82.7% | 56.7% |
| 4dcmA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 50.0 | 4.30e-01 | 92.3% | 83.9% |
| 3eoeD01 | 3.40.1380.20 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › Pyruvate kinase, C-terminal domain | 0.60 | 37.0 | 3.44e-01 | 71.2% | 46.7% |
| 2vdvE01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.60 | 42.0 | 3.46e-01 | 80.8% | 39.9% |
| 1bifA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 52.0 | 4.24e-01 | 100.0% | 85.9% |
| 2i3bA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 51.0 | 4.34e-01 | 100.0% | 86.8% |
| 1o0uA02 | 3.40.50.10180 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycerate kinase, MOFRL-like N-terminal domain | 0.59 | 50.0 | 3.96e-01 | 94.2% | 98.7% |
| 2hyiC02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 51.0 | 4.47e-01 | 100.0% | 90.4% |
| 3ktoA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 51.0 | 4.85e-01 | 100.0% | 81.1% |
| 3rc3A03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 51.0 | 4.53e-01 | 100.0% | 88.7% |
| 1obbA00 | 3.90.1820.10 | Alpha Beta › Alpha-Beta Complex › LDH C-terminal domain-like › AglA-like glucosidase | 0.58 | 41.0 | 2.63e-01 | 72.1% | 66.3% |
| 3ceuA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 49.0 | 4.07e-01 | 95.2% | 99.0% |
| 1d2gA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 48.0 | 4.03e-01 | 92.3% | 84.0% |
| 3ua3B01 | 3.20.20.150 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes | 0.58 | 50.0 | 3.76e-01 | 99.0% | 96.8% |
| 6i1cA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 34.0 | 3.37e-01 | 79.8% | 53.7% |
| 3berA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 49.0 | 3.98e-01 | 99.0% | 73.2% |
| 2l82A00 | 3.40.50.11230 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.57 | 50.0 | 4.40e-01 | 100.0% | 80.2% |
| 3tr2B00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 46.0 | 3.70e-01 | 90.4% | 85.5% |
| 1ab5A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 49.0 | 4.67e-01 | 100.0% | 80.0% |
| 3snkA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.57 | 44.0 | 4.31e-01 | 92.3% | 74.8% |
| 2yz2B00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 50.0 | 3.78e-01 | 100.0% | 66.5% |
| 3d6iA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.56 | 34.0 | 3.40e-01 | 81.7% | 56.4% |
| 2vf8B04 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 50.0 | 4.08e-01 | 100.0% | 61.7% |
| 2zayA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.56 | 47.0 | 4.50e-01 | 100.0% | 79.7% |
| 2q9uA02 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.56 | 49.0 | 4.43e-01 | 100.0% | 82.1% |
| 7wm5A01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 47.0 | 3.82e-01 | 94.2% | 67.1% |
| 3u0vA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 45.0 | 3.64e-01 | 92.3% | 74.3% |
| 1dcfA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 47.0 | 4.37e-01 | 100.0% | 75.2% |
| 1d5cA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 47.0 | 4.16e-01 | 100.0% | 85.2% |
| 5bxyA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 45.0 | 4.00e-01 | 93.3% | 83.8% |
| 5je8B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 45.0 | 3.86e-01 | 92.3% | 75.9% |
| 4q7eA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 44.0 | 4.20e-01 | 100.0% | 77.6% |
| 3hn7A03 | 3.90.190.20 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain | 0.53 | 45.0 | 4.09e-01 | 96.2% | 89.1% |
| 5djsA03 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.52 | 46.0 | 3.95e-01 | 100.0% | 81.0% |
| 3cq9A00 | 3.40.50.10240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin pyrophosphokinase, catalytic domain | 0.52 | 43.0 | 3.55e-01 | 94.2% | 94.6% |
| 5yznA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.51 | 41.0 | 3.18e-01 | 88.5% | 70.0% |
| 7wkqB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 45.0 | 3.69e-01 | 100.0% | 63.5% |
| 3ws7A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 46.0 | 3.86e-01 | 100.0% | 65.1% |
| 3t1oA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 44.0 | 3.68e-01 | 100.0% | 79.2% |
| 3dwlA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.51 | 38.0 | 3.31e-01 | 79.8% | 100.0% |
| 4s1wB01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.51 | 41.0 | 3.46e-01 | 93.3% | 63.5% |
| 3loqA02 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.50 | 45.0 | 4.19e-01 | 100.0% | 89.1% |
ECOD (90)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3969317 | 2004.1.1.138 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DNA_pol3_delta | 0.80 | 74.0 | 6.53e-01 | 100.0% | 82.8% |
| 3617770 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 64.0 | 5.27e-01 | 100.0% | 73.0% |
| 4994658 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.69 | 62.0 | 5.14e-01 | 100.0% | 77.8% |
| 3366541 | 2004.1.1.187 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DNA_pol3_delta2 | 0.69 | 62.0 | 5.13e-01 | 100.0% | 73.5% |
| 4993771 | 2004.1.1.343 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 | 0.69 | 61.0 | 4.79e-01 | 100.0% | 53.0% |
| 5036097 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.69 | 62.0 | 5.26e-01 | 100.0% | 68.8% |
| 3654445 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 62.0 | 4.67e-01 | 100.0% | 79.6% |
| 5022193 | 2004.1.1.343 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_14 | 0.69 | 61.0 | 4.76e-01 | 100.0% | 51.9% |
| 5051560 | 2004.1.1.187 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DNA_pol3_delta2 | 0.68 | 61.0 | 5.08e-01 | 100.0% | 77.8% |
| None | — | 0.68 | 60.0 | 4.30e-01 | 100.0% | 51.9% | |
| 1411587 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 60.0 | 4.50e-01 | 100.0% | 86.3% |
| 3625787 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.68 | 59.0 | 5.31e-01 | 100.0% | 69.7% |
| 3620711 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.67 | 60.0 | 5.08e-01 | 100.0% | 78.3% |
| 3658864 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.67 | 60.0 | 5.06e-01 | 100.0% | 71.4% |
| 4954660 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 47.0 | 4.80e-01 | 100.0% | 75.0% |
| 3789963 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.67 | 59.0 | 4.61e-01 | 100.0% | 58.3% |
| 4009283 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.67 | 59.0 | 5.08e-01 | 100.0% | 77.6% |
| 3954072 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.67 | 59.0 | 4.86e-01 | 100.0% | 77.4% |
| 3960720 | 2004.1.1.292 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AFG1_ATPase | 0.66 | 59.0 | 4.73e-01 | 100.0% | 61.9% |
| 4944408 | 2004.1.1.233 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Cas3-like_C_2 | 0.66 | 60.0 | 3.85e-01 | 100.0% | 37.6% |
| 4544549 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.66 | 55.0 | 4.44e-01 | 92.3% | 82.4% |
| 5025681 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.66 | 58.0 | 4.58e-01 | 100.0% | 67.3% |
| 3643612 | 2006.1.1.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.65 | 58.0 | 4.65e-01 | 100.0% | 66.7% |
| 3642369 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.65 | 48.0 | 4.91e-01 | 81.7% | 81.0% |
| 4980311 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.65 | 54.0 | 4.73e-01 | 92.3% | 78.8% |
| 3003998 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.65 | 57.0 | 4.48e-01 | 99.0% | 100.0% |
| 5053328 | 2007.3.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains | 0.65 | 55.0 | 4.70e-01 | 92.3% | 80.0% |
| 3569064 | 267.1.1.3 ↗ | a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Cation_ATPase | 0.65 | 57.0 | 3.71e-01 | 100.0% | 27.7% |
| 3957942 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.65 | 58.0 | 4.32e-01 | 100.0% | 68.3% |
| 3840111 | 2004.1.1.187 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DNA_pol3_delta2 | 0.65 | 57.0 | 5.51e-01 | 99.0% | 95.8% |
| 4136596 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.64 | 57.0 | 4.79e-01 | 100.0% | 78.9% |
| 4024569 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.64 | 56.0 | 4.52e-01 | 100.0% | 66.5% |
| 3811750 | 2006.1.1.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase | 0.64 | 57.0 | 4.42e-01 | 100.0% | 60.0% |
| 3501289 | 2004.1.1.209 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sigma54_activ_2 | 0.64 | 56.0 | 5.10e-01 | 100.0% | 78.6% |
| 5056113 | 2004.1.1.196 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_22 | 0.64 | 56.0 | 4.76e-01 | 100.0% | 74.4% |
| 4025069 | 2004.1.1.110 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ORC2 | 0.64 | 56.0 | 4.61e-01 | 100.0% | 69.2% |
| 3595556 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 56.0 | 4.51e-01 | 100.0% | 85.2% |
| 4947964 | 2007.3.1.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › ATP-grasp_5 | 0.63 | 57.0 | 4.90e-01 | 100.0% | 86.1% |
| None | — | 0.63 | 56.0 | 4.92e-01 | 100.0% | 80.6% | |
| 3350622 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.63 | 53.0 | 4.04e-01 | 92.3% | 78.0% |
| 4999585 | 2004.1.1.144 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD_2 | 0.63 | 56.0 | 4.22e-01 | 100.0% | 88.8% |
| 4195121 | 2004.1.1.106 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › RapZ-like_N | 0.63 | 45.0 | 4.75e-01 | 100.0% | 86.7% |
| 3672662 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.63 | 56.0 | 4.38e-01 | 100.0% | 52.4% |
| 3400659 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.62 | 52.0 | 4.53e-01 | 93.3% | 82.4% |
| 3412990 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.62 | 55.0 | 4.43e-01 | 100.0% | 61.4% |
| 3196949 | 2004.1.1.366 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NPHP3_N | 0.62 | 55.0 | 4.56e-01 | 100.0% | 72.6% |
| 3592803 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.62 | 54.0 | 4.14e-01 | 100.0% | 64.2% |
| 3993842 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.62 | 54.0 | 4.85e-01 | 100.0% | 70.7% |
| 3802419 | 2003.1.5.73 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_16 | 0.62 | 51.0 | 4.07e-01 | 95.2% | 76.2% |
| 3219769 | 2004.1.1.110 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ORC2 | 0.61 | 53.0 | 4.34e-01 | 100.0% | 63.3% |
| 3631263 | 2004.1.1.110 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ORC2 | 0.61 | 53.0 | 4.34e-01 | 100.0% | 70.7% |
| 3605947 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 53.0 | 4.76e-01 | 100.0% | 76.0% |
| 5064886 | 2004.1.1.210 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ERCC3_RAD25_C | 0.60 | 53.0 | 4.75e-01 | 100.0% | 96.7% |
| 4937124 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.60 | 49.0 | 4.06e-01 | 91.3% | 82.5% |
| 4339753 | 2003.1.5.17 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_5 | 0.60 | 50.0 | 4.04e-01 | 93.3% | 95.3% |
| 3926198 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.59 | 50.0 | 3.81e-01 | 92.3% | 52.8% |
| 1283690 | 2003.1.5.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › mRNA_G-N7_MeTrfase | 0.59 | 49.0 | 3.61e-01 | 93.3% | 73.2% |
| 3379963 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.59 | 52.0 | 4.15e-01 | 100.0% | 78.2% |
| 3226005 | 2004.1.1.163 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › KTI12 | 0.59 | 51.0 | 4.45e-01 | 100.0% | 85.3% |
| 3788080 | 2004.1.1.103 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Sua5_C | 0.59 | 52.0 | 5.17e-01 | 100.0% | 93.6% |
| 4012730 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.58 | 51.0 | 4.07e-01 | 100.0% | 75.6% |
| 4367798 | 2004.1.1.65 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › 6PF2K | 0.58 | 52.0 | 4.11e-01 | 100.0% | 51.8% |
| 4926829 | 2002.1.1.79 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › DUF72 | 0.58 | 51.0 | 4.05e-01 | 100.0% | 98.2% |
| 4608466 | 2003.1.5.71 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_33 | 0.58 | 43.0 | 3.05e-01 | 78.8% | 42.7% |
| 4606779 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.58 | 50.0 | 4.49e-01 | 100.0% | 66.7% |
| 3754962 | 2004.1.1.65 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › 6PF2K | 0.58 | 51.0 | 3.88e-01 | 100.0% | 43.8% |
| 3591057 | 2004.1.1.208 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_33 | 0.58 | 50.0 | 4.16e-01 | 100.0% | 88.0% |
| 3495698 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.58 | 42.0 | 3.72e-01 | 77.9% | 67.3% |
| 3311740 | 2006.1.1.20 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › PhoLip_ATPase_C | 0.58 | 51.0 | 3.96e-01 | 100.0% | 72.5% |
| 3713746 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.58 | 42.0 | 3.97e-01 | 80.8% | 63.2% |
| 3193985 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.57 | 42.0 | 3.32e-01 | 77.9% | 39.5% |
| 3672771 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.57 | 49.0 | 3.59e-01 | 100.0% | 37.2% |
| 4607177 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.57 | 48.0 | 4.17e-01 | 100.0% | 91.1% |
| 149841 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.57 | 49.0 | 4.56e-01 | 100.0% | 76.9% |
| 3229729 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.56 | 49.0 | 4.09e-01 | 100.0% | 72.3% |
| 4385096 | 4978.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › a/b domain in AF0625-like proteins › tRNA_deacylase | 0.56 | 41.0 | 4.38e-01 | 99.0% | 94.1% |
| 4023706 | 2004.1.1.548 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras, Roc | 0.55 | 49.0 | 3.92e-01 | 100.0% | 80.0% |
| 3611281 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.55 | 44.0 | 3.83e-01 | 91.3% | 97.1% |
| 3464927 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.55 | 47.0 | 3.60e-01 | 100.0% | 45.6% |
| 3954589 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.54 | 48.0 | 4.23e-01 | 99.0% | 69.7% |
| 2889549 | 2007.1.3.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › B12-binding | 0.54 | 47.0 | 4.55e-01 | 100.0% | 86.8% |
| 4958667 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.54 | 45.0 | 4.36e-01 | 100.0% | 81.5% |
| 3033305 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.54 | 44.0 | 3.31e-01 | 92.3% | 75.4% |
| 4198066 | 7590.1.1.0 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs | 0.53 | 41.0 | 3.66e-01 | 100.0% | 55.6% |
| 3397823 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.53 | 47.0 | 4.02e-01 | 100.0% | 93.1% |
| 3272173 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.53 | 42.0 | 3.85e-01 | 84.6% | 81.5% |
| 4957763 | 2007.3.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Succinyl-CoA synthetase domains › Succinyl-CoA synthetase domains › Ligase_CoA_2 | 0.53 | 46.0 | 4.04e-01 | 100.0% | 67.5% |
| 3702654 | 2003.1.5.6 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltr_RsmB-F | 0.51 | 46.0 | 3.09e-01 | 100.0% | 38.8% |
| 3322389 | 2004.1.1.56 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › NB-ARC | 0.51 | 44.0 | 3.72e-01 | 99.0% | 70.3% |
| 4428934 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.51 | 44.0 | 3.79e-01 | 100.0% | 79.4% |
D2
high
residues 115-171
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qq8A03 | 1.10.472.80 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 | 0.72 | 64.0 | 4.75e-01 | 100.0% | 84.0% |
| 1jqjD03 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.70 | 59.0 | 5.27e-01 | 98.2% | 69.8% |
| 1iqpA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 59.0 | 5.80e-01 | 100.0% | 92.2% |
| 2fh0A00 | 1.10.8.140 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain | 0.69 | 55.0 | 4.97e-01 | 89.5% | 69.1% |
| 2cruA01 | 1.10.8.140 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PDCD5, DNA-binding domain | 0.68 | 56.0 | 5.14e-01 | 94.7% | 77.9% |
| 1vegA01 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.65 | 44.0 | 4.76e-01 | 93.0% | 93.2% |
| 3zfiA00 | 1.10.890.40 | Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › | 0.55 | 44.0 | 3.81e-01 | 91.2% | 73.1% |
| 3nz4B03 | 1.10.274.20 | Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Phenylalanine ammonia-lyase 1; domain 3 | 0.51 | 39.0 | 3.32e-01 | 87.7% | 53.8% |
| 1db2A01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.50 | 42.0 | 2.98e-01 | 100.0% | 42.0% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4991379 | 2004.1.1.66 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 | 0.75 | 58.0 | 3.89e-01 | 100.0% | 22.3% |
| 5044117 | 2004.1.1.66 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase_2 | 0.74 | 59.0 | 3.88e-01 | 100.0% | 21.3% |
| 4937736 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.73 | 58.0 | 4.83e-01 | 87.7% | 55.0% |
| 4965369 | 148.1.3.50 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid | 0.72 | 64.0 | 5.87e-01 | 100.0% | 88.0% |
| 4963759 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.72 | 63.0 | 5.79e-01 | 100.0% | 88.0% |
| 4953878 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 61.0 | 5.44e-01 | 100.0% | 77.6% |
| 3592638 | 103.7.1.0 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 | 0.71 | 58.0 | 5.17e-01 | 94.7% | 69.4% |
| 4284151 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 61.0 | 5.39e-01 | 100.0% | 80.0% |
| 5011845 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 61.0 | 5.59e-01 | 100.0% | 74.7% |
| 3204858 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.70 | 58.0 | 5.20e-01 | 93.0% | 75.0% |
| 3589370 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.70 | 59.0 | 5.58e-01 | 100.0% | 90.0% |
| 3178924 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.69 | 58.0 | 4.65e-01 | 94.7% | 52.2% |
| 1003781 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.69 | 55.0 | 4.97e-01 | 89.5% | 69.1% |
| 4533144 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.69 | 57.0 | 4.75e-01 | 94.7% | 56.2% |
| 4942945 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.69 | 59.0 | 5.19e-01 | 100.0% | 71.6% |
| 4046331 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 59.0 | 5.48e-01 | 100.0% | 84.0% |
| 4027331 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.69 | 56.0 | 4.71e-01 | 94.7% | 56.2% |
| 4009282 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.69 | 58.0 | 5.42e-01 | 100.0% | 97.3% |
| 5047288 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.69 | 57.0 | 4.77e-01 | 94.7% | 60.0% |
| 4121495 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 58.0 | 5.38e-01 | 100.0% | 78.7% |
| 4318694 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.68 | 54.0 | 4.71e-01 | 93.0% | 61.1% |
| 3240928 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 57.0 | 5.57e-01 | 100.0% | 96.9% |
| 3927265 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.67 | 54.0 | 4.96e-01 | 94.7% | 75.0% |
| 4979037 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 54.0 | 5.02e-01 | 94.7% | 94.7% |
| 4979179 | 103.7.1.1 ↗ | alpha arrays › RuvA-C › Hypothetical protein MTH1615 › Hypothetical protein MTH1615 › dsDNA_bind | 0.66 | 56.0 | 4.54e-01 | 100.0% | 52.9% |
| 4018670 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.62 | 51.0 | 4.38e-01 | 100.0% | 89.5% |
| 1414245 | 101.1.1.78 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › SoPB_HTH | 0.61 | 50.0 | 4.17e-01 | 100.0% | 57.4% |
| 3328535 | 632.2.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Bacterial immunoglobulin/albumin-binding domains › Bacterial immunoglobulin/albumin-binding domains | 0.61 | 46.0 | 4.55e-01 | 84.2% | 93.3% |
| 3363158 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 48.0 | 4.22e-01 | 94.7% | 77.8% |
D3
high
residues 182-296
Domain cluster:
representative
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3zh9B03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.85 | 80.0 | 7.74e-01 | 100.0% | 94.4% |
| 1jr3C02 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.78 | 69.0 | 6.79e-01 | 100.0% | 90.2% |
| 1aisB02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.71 | 30.0 | 3.38e-01 | 100.0% | 48.9% |
| 3hugA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 32.0 | 3.83e-01 | 70.4% | 61.3% |
| 4nqwA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 31.0 | 4.17e-01 | 72.2% | 76.6% |
| 2o8xA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.70 | 31.0 | 4.11e-01 | 71.3% | 77.0% |
| 3t0yA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 30.0 | 4.00e-01 | 72.2% | 80.0% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.64 | 34.0 | 3.61e-01 | 78.3% | 56.3% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.60 | 49.0 | 4.48e-01 | 94.8% | 66.0% |
| 3vfzB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 30.0 | 3.99e-01 | 94.8% | 92.1% |
| 1on2A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 36.0 | 4.44e-01 | 73.9% | 100.0% |
| 3geeA02 | 1.20.120.430 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › tRNA modification GTPase MnmE domain 2 | 0.58 | 50.0 | 4.45e-01 | 100.0% | 64.9% |
| 1sfxB00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 41.0 | 4.26e-01 | 74.8% | 91.3% |
| 3o6xA02 | 1.20.120.1560 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.56 | 44.0 | 4.06e-01 | 82.6% | 73.6% |
| 4k0dA00 | 1.20.120.1730 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.56 | 41.0 | 3.85e-01 | 98.3% | 62.2% |
| 4e40A00 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.55 | 43.0 | 3.34e-01 | 82.6% | 76.7% |
| 6t0bc02 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.55 | 48.0 | 4.05e-01 | 100.0% | 57.6% |
| 2ccyA00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.55 | 43.0 | 4.26e-01 | 100.0% | 78.7% |
| 1m56C02 | 1.20.120.80 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c oxidase, subunit III, four-helix bundle | 0.53 | 47.0 | 3.94e-01 | 100.0% | 56.6% |
| 3s2wG00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 38.0 | 3.70e-01 | 84.3% | 70.7% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 235968 | 138.1.1.9 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C | 0.85 | 80.0 | 7.76e-01 | 100.0% | 95.2% |
| 5027339 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.82 | 67.0 | 7.24e-01 | 100.0% | 100.0% |
| 4602544 | 138.1.1.9 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C | 0.82 | 76.0 | 7.40e-01 | 100.0% | 96.0% |
| 3965546 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.82 | 71.0 | 7.07e-01 | 100.0% | 89.2% |
| 3955613 | 138.1.1.9 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C | 0.81 | 76.0 | 7.38e-01 | 100.0% | 92.0% |
| 4638242 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.80 | 73.0 | 6.70e-01 | 100.0% | 77.2% |
| 4683333 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.78 | 70.0 | 6.93e-01 | 100.0% | 92.5% |
| 3969307 | 138.1.1.6 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delt_C | 0.77 | 71.0 | 6.84e-01 | 100.0% | 95.4% |
| 3978331 | 138.1.1.6 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delt_C | 0.76 | 70.0 | 6.72e-01 | 100.0% | 88.5% |
| 3965780 | 138.1.1.9 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delta_C | 0.75 | 68.0 | 6.76e-01 | 99.1% | 97.5% |
| 4145434 | 138.1.1.6 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delt_C | 0.73 | 67.0 | 6.63e-01 | 100.0% | 95.0% |
| 4134989 | 138.1.1.6 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_delt_C | 0.73 | 65.0 | 6.35e-01 | 100.0% | 91.2% |
| 4956290 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.67 | 38.0 | 4.94e-01 | 77.4% | 100.0% |
| 5040079 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.62 | 36.0 | 4.46e-01 | 72.2% | 89.3% |
| 4948528 | 1075.5.1.4 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt | 0.61 | 51.0 | 3.62e-01 | 93.9% | 61.5% |
| 3974601 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.61 | 42.0 | 4.31e-01 | 100.0% | 73.6% |
| 4026960 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.60 | 39.0 | 4.64e-01 | 70.4% | 100.0% |
| 3454912 | 5050.1.1.28 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › BT1 | 0.60 | 41.0 | 3.21e-01 | 87.0% | 34.0% |
| 4984666 | 101.1.2.141 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_24 | 0.59 | 38.0 | 4.66e-01 | 94.8% | 100.0% |
| 3967556 | 601.3.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine-containing phosphotransfer domain, HPT domain › Histidine-containing phosphotransfer domain, HPT domain | 0.58 | 39.0 | 4.19e-01 | 100.0% | 80.0% |
| 3876919 | 5001.1.1.11 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_4 | 0.56 | 45.0 | 3.76e-01 | 84.3% | 98.4% |
| 5014572 | 2.21.1.3 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › HTH_OrfB_IS605 | 0.55 | 46.0 | 4.07e-01 | 89.6% | 95.8% |
| 3953807 | 101.1.6.0 ↗ | alpha arrays › HTH › HTH › TrpR | 0.55 | 44.0 | 3.94e-01 | 86.1% | 99.4% |
| 3440913 | 4006.1.1.0 ↗ | alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain | 0.55 | 42.0 | 4.02e-01 | 80.0% | 77.0% |
| 3793383 | 101.1.3.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, LuxR-like | 0.54 | 29.0 | 3.62e-01 | 95.7% | 89.2% |
| 5052922 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.54 | 42.0 | 4.23e-01 | 100.0% | 81.7% |
| 5009551 | 601.7.1.3 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › PaREP1 | 0.53 | 43.0 | 4.21e-01 | 100.0% | 79.2% |
| 3467700 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.53 | 40.0 | 4.00e-01 | 95.7% | 79.1% |
| 4143589 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.52 | 38.0 | 3.59e-01 | 79.1% | 62.6% |
| 5059356 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.52 | 32.0 | 3.18e-01 | 100.0% | 58.5% |
| 4941563 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.52 | 47.0 | 3.78e-01 | 100.0% | 64.5% |
| 3740106 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.51 | 37.0 | 3.79e-01 | 85.2% | 76.5% |
| 3855578 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 42.0 | 3.30e-01 | 87.8% | 84.6% |
| 4092719 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.50 | 41.0 | 3.34e-01 | 87.8% | 82.3% |
| 5030545 | 101.1.2.21 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repress | 0.50 | 39.0 | 3.68e-01 | 82.6% | 79.3% |
| 5045559 | 101.1.2.652 ↗ | alpha arrays › HTH › HTH › winged helix domain › Fe_dep_repr_C | 0.50 | 39.0 | 3.70e-01 | 83.5% | 79.3% |
| 3391989 | 7015.1.1.2 ↗ | alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › XK-related | 0.50 | 41.0 | 2.93e-01 | 88.7% | 53.4% |