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term4_saliva_scaffold_1_prodigal-single.1__X__X__00106
Bact-Virterm4_saliva_scaffold_1_prodigal-single.1__X__X__00106
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-74
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2e8oA01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.59 | 39.0 | 4.20e-01 | 81.1% | 83.9% |
| 2ys9A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 39.0 | 3.99e-01 | 81.1% | 74.3% |
| 1b72A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 42.0 | 4.39e-01 | 91.9% | 86.8% |
| 1akhB00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.56 | 43.0 | 4.29e-01 | 95.9% | 79.5% |
| 4bxoA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.55 | 39.0 | 4.06e-01 | 93.2% | 83.6% |
| 3m8jA00 | 1.10.10.2690 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.55 | 38.0 | 3.55e-01 | 95.9% | 58.9% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.51 | 43.0 | 4.18e-01 | 93.2% | 93.8% |
| 8b0qA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.51 | 34.0 | 3.57e-01 | 83.8% | 83.3% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5022597 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.62 | 43.0 | 4.55e-01 | 91.9% | 83.1% |
| 3223965 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.57 | 38.0 | 4.27e-01 | 81.1% | 92.7% |
| 3495446 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.56 | 38.0 | 4.02e-01 | 87.8% | 85.0% |
| 3889826 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.56 | 37.0 | 4.04e-01 | 83.8% | 90.9% |
| 3528634 | 101.1.1.36 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Homeobox_KN | 0.56 | 42.0 | 4.01e-01 | 87.8% | 69.4% |
| 3537970 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 37.0 | 3.95e-01 | 87.8% | 86.7% |
| 3846966 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.55 | 37.0 | 3.97e-01 | 89.2% | 88.3% |
| 4965217 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.54 | 38.0 | 3.92e-01 | 90.5% | 77.1% |
| 5073407 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.54 | 42.0 | 4.31e-01 | 98.6% | 92.8% |
| 3318298 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 41.0 | 4.37e-01 | 91.9% | 95.4% |
| 1170597 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.52 | 39.0 | 3.80e-01 | 97.3% | 74.4% |
| 3450169 | 101.1.1.67 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_6 | 0.51 | 38.0 | 4.11e-01 | 87.8% | 98.3% |
D2
medium
residues 75-148
Domain cluster:
representative
CATH (40)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.71 | 59.0 | 4.95e-01 | 89.2% | 57.9% |
| 3hh0A01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.70 | 55.0 | 5.65e-01 | 85.1% | 98.6% |
| 3qaoA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.70 | 58.0 | 4.67e-01 | 90.5% | 52.1% |
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.69 | 57.0 | 4.78e-01 | 90.5% | 58.7% |
| 4lhfA00 | 6.10.200.10 | Special › Helix non-globular › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › Regulatory phage protein Cox | 0.69 | 53.0 | 5.24e-01 | 81.1% | 75.9% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.68 | 54.0 | 5.65e-01 | 85.1% | 100.0% |
| 3gp4B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.68 | 55.0 | 4.59e-01 | 89.2% | 56.2% |
| 3ucsA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.66 | 54.0 | 4.85e-01 | 86.5% | 73.7% |
| 4ha8A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 43.0 | 4.64e-01 | 93.2% | 77.8% |
| 4nb5B01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.66 | 44.0 | 4.17e-01 | 95.9% | 58.8% |
| 4r24B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.66 | 56.0 | 5.36e-01 | 93.2% | 88.2% |
| 2xfvA00 | 3.10.260.30 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › | 0.63 | 44.0 | 3.91e-01 | 73.0% | 72.2% |
| 3mq0A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 39.0 | 3.94e-01 | 86.5% | 61.0% |
| 1z4hA01 | 1.10.238.160 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › | 0.61 | 42.0 | 4.68e-01 | 81.1% | 93.1% |
| 2fxaA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 43.0 | 3.33e-01 | 74.3% | 67.9% |
| 6oinA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 39.0 | 4.07e-01 | 81.1% | 73.1% |
| 1vioA01 | 3.10.290.10 | Alpha Beta › Roll › Structural Genomics Hypothetical 15.5 Kd Protein In mrcA-pckA Intergenic Region; Chain A › RNA-binding S4 domain | 0.60 | 41.0 | 4.55e-01 | 81.1% | 91.4% |
| 1mkmB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.60 | 41.0 | 4.14e-01 | 93.2% | 69.7% |
| 1lj9B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 41.0 | 3.35e-01 | 74.3% | 66.2% |
| 5o7oC01 | 3.30.310.280 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › | 0.58 | 40.0 | 3.40e-01 | 71.6% | 66.4% |
| 5trdA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 40.0 | 3.91e-01 | 83.8% | 64.3% |
| 3kxaA02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.58 | 43.0 | 4.58e-01 | 97.3% | 89.4% |
| 1hw1A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 40.0 | 4.01e-01 | 97.3% | 70.7% |
| 2lh9A00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.57 | 42.0 | 4.13e-01 | 79.7% | 73.1% |
| 2y75A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 42.0 | 3.59e-01 | 94.6% | 47.2% |
| 6az6A01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.57 | 41.0 | 4.12e-01 | 100.0% | 73.3% |
| 3s93A00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.56 | 41.0 | 4.03e-01 | 86.5% | 71.2% |
| 2fhfA04 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.56 | 47.0 | 2.86e-01 | 100.0% | 91.6% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 43.0 | 3.39e-01 | 83.8% | 41.8% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 43.0 | 3.45e-01 | 83.8% | 46.1% |
| 2isyA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 42.0 | 3.45e-01 | 82.4% | 67.4% |
| 3ke2B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.54 | 41.0 | 3.81e-01 | 81.1% | 77.1% |
| 5a48B00 | 3.30.420.610 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › LOTUS domain-like | 0.54 | 40.0 | 3.69e-01 | 91.9% | 60.4% |
| 3k69A00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 43.0 | 3.43e-01 | 90.5% | 43.3% |
| 2e7zA01 | 2.20.25.90 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ADC-like domains | 0.53 | 27.0 | 3.05e-01 | 89.2% | 59.6% |
| 3f2gA00 | 3.30.450.410 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.52 | 47.0 | 3.41e-01 | 100.0% | 59.5% |
| 2p8tA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 40.0 | 4.04e-01 | 94.6% | 81.3% |
| 1aoyA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 38.0 | 3.74e-01 | 91.9% | 74.4% |
| 3l4gB03 | 3.30.56.10 | Alpha Beta › 2-Layer Sandwich › Phenylalanyl-tRNA Synthetase; Chain B, domain 1 › | 0.51 | 39.0 | 3.91e-01 | 85.1% | 90.5% |
| 1t3aA00 | 3.90.1240.10 | Alpha Beta › Alpha-Beta Complex › Zincin-like › "Metalloproteases (""zincins""), catalytic domain like" | 0.51 | 43.0 | 2.80e-01 | 100.0% | 51.0% |
ECOD (90)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4950846 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.89 | 58.0 | 7.09e-01 | 78.4% | 100.0% |
| 5047649 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.88 | 58.0 | 6.97e-01 | 74.3% | 100.0% |
| 4375315 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.87 | 57.0 | 6.88e-01 | 82.4% | 100.0% |
| 3960483 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.87 | 57.0 | 6.91e-01 | 75.7% | 100.0% |
| 3955723 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.87 | 57.0 | 6.87e-01 | 78.4% | 100.0% |
| 5070666 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.86 | 59.0 | 6.85e-01 | 79.7% | 96.4% |
| 4527613 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.86 | 57.0 | 5.55e-01 | 78.4% | 63.3% |
| 5082561 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.86 | 56.0 | 6.79e-01 | 79.7% | 100.0% |
| 4176315 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.85 | 56.0 | 6.55e-01 | 78.4% | 92.6% |
| 3954117 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.85 | 58.0 | 5.53e-01 | 79.7% | 61.2% |
| 3953197 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.85 | 58.0 | 5.26e-01 | 81.1% | 54.7% |
| 3281256 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.85 | 58.0 | 5.66e-01 | 79.7% | 65.0% |
| 4992437 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.85 | 54.0 | 5.96e-01 | 78.4% | 80.0% |
| 1710781 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.84 | 56.0 | 6.42e-01 | 78.4% | 91.1% |
| 4933561 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.84 | 57.0 | 6.55e-01 | 79.7% | 94.5% |
| 4932995 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.84 | 55.0 | 6.57e-01 | 75.7% | 100.0% |
| 5064906 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.84 | 58.0 | 6.65e-01 | 79.7% | 96.4% |
| 3285399 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.84 | 52.0 | 6.28e-01 | 77.0% | 94.0% |
| 3385701 | 101.1.9.95 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF3972 | 0.83 | 56.0 | 6.43e-01 | 83.8% | 92.7% |
| 4994568 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.83 | 58.0 | 6.69e-01 | 82.4% | 98.2% |
| 4682727 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.83 | 54.0 | 6.26e-01 | 75.7% | 90.9% |
| 3289439 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.82 | 57.0 | 6.57e-01 | 82.4% | 96.4% |
| 3278372 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.82 | 57.0 | 6.10e-01 | 71.6% | 89.2% |
| 3951460 | 101.30.1.3 ↗ | alpha arrays › HTH › Rv2175c › Rv2175c › Rv2175c_wHTH | 0.82 | 76.0 | 7.09e-01 | 100.0% | 83.3% |
| 3290032 | 101.1.9.126 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Rv2175c_C, Rv2175c_wHTH | 0.82 | 73.0 | 6.34e-01 | 100.0% | 65.7% |
| 4995042 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.82 | 59.0 | 5.57e-01 | 86.5% | 64.7% |
| 5002797 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.82 | 57.0 | 6.28e-01 | 79.7% | 88.3% |
| 2168161 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.82 | 58.0 | 6.60e-01 | 82.4% | 96.5% |
| 4547937 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.81 | 56.0 | 6.24e-01 | 78.4% | 91.4% |
| 3958314 | 101.1.9.66 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Rv2175c_wHTH | 0.80 | 55.0 | 6.29e-01 | 82.4% | 96.4% |
| 3840108 | 101.1.9.95 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF3972 | 0.79 | 55.0 | 6.05e-01 | 85.1% | 88.3% |
| 3589467 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.79 | 53.0 | 5.07e-01 | 81.1% | 60.0% |
| 4974775 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.79 | 54.0 | 5.94e-01 | 78.4% | 86.7% |
| 4311945 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.79 | 73.0 | 5.94e-01 | 100.0% | 58.5% |
| 3589130 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.78 | 53.0 | 6.08e-01 | 78.4% | 94.5% |
| 3962562 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.78 | 66.0 | 5.77e-01 | 95.9% | 62.9% |
| 4668445 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.78 | 53.0 | 6.05e-01 | 78.4% | 96.4% |
| 5073619 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.78 | 58.0 | 6.20e-01 | 78.4% | 98.5% |
| 4266122 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.77 | 52.0 | 4.75e-01 | 77.0% | 53.7% |
| 3281621 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.77 | 55.0 | 6.28e-01 | 79.7% | 100.0% |
| 4548007 | 101.1.9.16 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › HTH_17 | 0.76 | 56.0 | 5.34e-01 | 81.1% | 67.1% |
| 5030468 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.76 | 51.0 | 4.80e-01 | 82.4% | 57.8% |
| 4051681 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.74 | 50.0 | 4.05e-01 | 77.0% | 37.8% |
| 4090636 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.74 | 50.0 | 5.13e-01 | 77.0% | 72.9% |
| 3587879 | 101.1.9.36 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR | 0.72 | 59.0 | 5.12e-01 | 87.8% | 65.5% |
| 3284779 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.71 | 55.0 | 4.57e-01 | 82.4% | 54.4% |
| 3290830 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.71 | 55.0 | 4.72e-01 | 82.4% | 61.7% |
| 3284986 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.71 | 55.0 | 4.62e-01 | 82.4% | 55.8% |
| 3972191 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.70 | 57.0 | 4.55e-01 | 86.5% | 49.3% |
| 3281873 | 101.1.9.84 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 | 0.70 | 61.0 | 4.26e-01 | 94.6% | 33.9% |
| 3279459 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.70 | 57.0 | 4.75e-01 | 86.5% | 55.3% |
| 3290892 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.70 | 60.0 | 5.28e-01 | 91.9% | 70.5% |
| 5007668 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.70 | 58.0 | 4.80e-01 | 87.8% | 57.6% |
| 1827815 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.70 | 56.0 | 5.88e-01 | 86.5% | 100.0% |
| 3946974 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.70 | 49.0 | 4.38e-01 | 81.1% | 52.4% |
| 3975516 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.69 | 56.0 | 4.93e-01 | 86.5% | 68.6% |
| 4334333 | 101.1.9.1 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR,MerR-DNA-bind | 0.69 | 59.0 | 4.72e-01 | 91.9% | 52.9% |
| 3976170 | 101.1.9.26 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like | 0.69 | 49.0 | 5.02e-01 | 78.4% | 77.1% |
| 3284686 | 101.1.9.84 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR, MerR_1 | 0.69 | 60.0 | 4.13e-01 | 93.2% | 32.6% |
| 3949463 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.69 | 57.0 | 4.92e-01 | 89.2% | 64.3% |
| 3966930 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.69 | 59.0 | 5.09e-01 | 91.9% | 69.1% |
| 3974460 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.69 | 56.0 | 4.62e-01 | 87.8% | 54.6% |
| 4520820 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.69 | 53.0 | 5.35e-01 | 82.4% | 88.0% |
| 4096952 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.69 | 56.0 | 4.79e-01 | 87.8% | 64.3% |
| 3979434 | 101.1.9.101 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF1441 | 0.68 | 48.0 | 5.46e-01 | 86.5% | 98.2% |
| 3948669 | 101.1.9.26 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › YfeC-like | 0.68 | 49.0 | 4.23e-01 | 75.7% | 49.6% |
| 4101677 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.68 | 60.0 | 4.83e-01 | 94.6% | 60.0% |
| 4254112 | 101.1.9.18 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 | 0.68 | 55.0 | 5.12e-01 | 85.1% | 78.9% |
| 3291218 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.68 | 54.0 | 4.49e-01 | 86.5% | 54.6% |
| 4420911 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.67 | 54.0 | 4.40e-01 | 86.5% | 51.1% |
| 3387406 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.67 | 57.0 | 5.01e-01 | 91.9% | 71.4% |
| 4518241 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.67 | 57.0 | 5.71e-01 | 91.9% | 97.3% |
| 3943313 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.67 | 58.0 | 4.96e-01 | 94.6% | 65.2% |
| 3976015 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.66 | 54.0 | 5.34e-01 | 89.2% | 87.5% |
| 3281871 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.66 | 52.0 | 4.43e-01 | 85.1% | 58.3% |
| 1068666 | 101.1.9.18 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_2 | 0.66 | 53.0 | 4.77e-01 | 85.1% | 72.0% |
| 3278826 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.66 | 53.0 | 4.44e-01 | 85.1% | 57.5% |
| 3280706 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.66 | 53.0 | 5.20e-01 | 87.8% | 90.0% |
| 3974607 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.65 | 56.0 | 4.64e-01 | 94.6% | 55.4% |
| 4951929 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.65 | 54.0 | 5.44e-01 | 90.5% | 96.0% |
| 4933456 | 101.1.2.136 ↗ | alpha arrays › HTH › HTH › winged helix domain › HTH_20 | 0.63 | 42.0 | 4.10e-01 | 89.2% | 63.7% |
| 3654295 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 42.0 | 4.03e-01 | 87.8% | 60.2% |
| 3279128 | 101.1.2.78 ↗ | alpha arrays › HTH › HTH › winged helix domain › AlkZ-like | 0.61 | 38.0 | 3.95e-01 | 93.2% | 67.1% |
| 5009810 | 101.1.2.927 ↗ | alpha arrays › HTH › HTH › winged helix domain › DUF7347 | 0.60 | 41.0 | 4.07e-01 | 83.8% | 66.3% |
| 4943612 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.59 | 42.0 | 3.55e-01 | 83.8% | 45.8% |
| 3694813 | 101.1.2.45 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP | 0.59 | 44.0 | 4.07e-01 | 86.5% | 62.1% |
| 3291053 | 101.1.2.78 ↗ | alpha arrays › HTH › HTH › winged helix domain › AlkZ-like | 0.58 | 34.0 | 3.61e-01 | 85.1% | 66.2% |
| 3634624 | 101.1.2.45 ↗ | alpha arrays › HTH › HTH › winged helix domain › SAC3_GANP | 0.55 | 44.0 | 2.86e-01 | 86.5% | 20.3% |
| 5036602 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.51 | 36.0 | 3.50e-01 | 75.7% | 71.8% |
| 3712396 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 44.0 | 4.06e-01 | 97.3% | 78.9% |
D3
medium
residues 149-205
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5ctrA01 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.78 | 57.0 | 3.54e-01 | 94.7% | 14.8% |
| 4l9pA00 | 1.25.40.120 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Protein prenylyltransferase | 0.75 | 53.0 | 3.22e-01 | 89.5% | 12.5% |
| 2p4hX00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.73 | 51.0 | 3.16e-01 | 73.7% | 16.8% |
| 4j8dD00 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.65 | 48.0 | 3.53e-01 | 80.7% | 35.8% |
| 1oaaA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.64 | 46.0 | 2.98e-01 | 77.2% | 66.4% |
| 2vcnA01 | 1.10.520.10 | Mainly Alpha › Orthogonal Bundle › Peroxidase; domain 1 › | 0.53 | 39.0 | 3.08e-01 | 84.2% | 52.1% |
| 3l4gC02 | 1.10.10.2320 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.52 | 35.0 | 3.80e-01 | 71.9% | 95.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2409829 | 101.1.4.14 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Xre_MbcA_ParS_C,Xre-like-HTH | 0.84 | 61.0 | 4.42e-01 | 86.0% | 29.5% |
| 4555054 | 101.1.4.14 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › Xre_MbcA_ParS_C,Xre-like-HTH | 0.76 | 53.0 | 4.25e-01 | 73.7% | 38.2% |
| 4952173 | 109.4.1.207 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT_2 | 0.69 | 53.0 | 4.40e-01 | 82.5% | 70.4% |
| 3676944 | 109.4.1.1528 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_TEX10 | 0.67 | 54.0 | 3.03e-01 | 87.7% | 7.8% |
D4
medium
residues 215-396
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3l4gC03 | 1.10.10.2330 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.64 | 16.0 | 3.08e-01 | 99.5% | 73.6% |
| 4r24B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.60 | 29.0 | 4.16e-01 | 70.9% | 98.8% |
| 2ethA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.53 | 28.0 | 3.13e-01 | 90.1% | 65.2% |